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LotjaGi1g1v0063200.1

Overview

Field Value
Gene ID LotjaGi1g1v0063200
Transcript ID LotjaGi1g1v0063200.1
Lotus japonicus genome version Gifu v1.2
Description Leucine-rich repeat receptor-like protein kinase family protein; TAIR: AT2G34930.1 disease resistance family protein / LRR family protein; Swiss-Prot: sp|C0LGQ5|GSO1_ARATH LRR receptor-like serine/threonine-protein kinase GSO1; TrEMBL-Plants: tr|A0A072UGF0|A0A072UGF0_MEDTR Leucine-rich receptor-like kinase family protein; Found in the gene: LotjaGi1g1v0063200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:8775403..8779917) extracted from Lotus japonicus Gifu genome v1.2.

TGGAGAGATTGGAAGAGGAGAGTGGATGTCAAAGATGAGATAGTTGATACAATATGATATAATGAGGGAACAAAAAAAAA AGAGGTGTTCAAGAGGTGAATGTAATGCTGTGGTTTCTAAAATTAAAGTTGTTATATCAACCACCATGGTTAGCTTTTAC TTATTATGAAAAAAACAGAAGATTGCTTTTGTCATATAATTTCATAAGAGCATGATGAGGAGTTCTGTGTCTCTCAAGTT CCTTGGAGCAATCTGTGTGGTGTCTTTGTTGCTGCACCAACACCTTCCTCTGTCCAACTATTACAAAGCTTCAGCTGCAG AACAAGTTGGGTGCATTGAGAAGGAGAGGCACACTCTCCTTGAGTTAAAAGCAGGCTTGGTGCTTGATGACACCACCCTT TTGCCTTCTTGGAAAAGTGATTCTGGCAATAGCAGCACTGATTGCTGTGAATGGAAAGGAGTCAGTTGTAGTAAAAAAAC TGGTCATGTTGAAATGCTTGATCTAAATGGCGATCATTTTGGTCCATTTCGAGGCGAGATAAGCTCATCATTGATCAAGT TGAAACATCTAAAACATTTGAATCTCAGTCGGAATCGGTTCATACACAACCCTCCTATTCCAAGCTTCTTTGGTTCTCTA AGCAGATTGAGATTACTTGATCTCAAAGGTTCACATTTTGGTGGAAGAATTCCAAATGATCTTGCCAACCTTTCACACTT GCAATACCTTGATCTTTCATCTAACAACCTGGAGGGTACAATCCCTCAACAACTTGGAAACCTCTCTCATTTGCAGTATC TTGATCTGGGTGTGAACTCTCTTGTTGGAACAATCCCGCATCAACTTTGCAGTCTCTCGAACTTGCAGGAGCTTCATCTT GGATACACTAAAGGACTCAAAATTGATCATGACCAGAATCATGAGTGGTCCAATCTCACTCATTTAACCCATCTAGACTT GAGTCAGGTGCATAATCTAAACCGTTCTCATGCGTGGCTTCAAATGATTGGTATGCTTCCAAAACTACAAAAACTGGTGT TGTATGATTGTGATCTTTCAGATCTTTTTCTCCGTTCTCTATCTCCTTCAGCATTAAATTTCTCTACTTCCCTTACTATA CTCGATCTTTCTCGGAATAATTTCACATCATCTTTAATATTCCAATGGGTGTTTAATGCTTGCTCCAACATAACCCAGCT TGATCTTAGCCTTAACAACTTGGAAGGTCCCATTCTTTATGATTTTGGCAACATCAGAAATCCTCTTGCACATCTTTACC TGTCTTATAATAATGAACTACAGGGTGGAATTCTGGAATCCATTAGTAATATTTGTACCTTACGCACGTTGTACATTGAC TCCATCAATTTGAATGAGGACATCTCAACAATTCTTCTTAGCTTTTCTGGTTGTGCTAGATCCTCACTGCAAATATTTAG TTTATTTTACAACCAAATTTCTGGCACATTATCAGAACTTTCAATGTTTCCCTCTCTAAAAGAATTAGACCTTTCAGATA ATCAGTTAAATGGGAAGCTGCCAGAAGCTGATAAATTGCCATCTAAATTGGAGTCTTTGATAGTCAAATCAAACTCTTTG CAAGGTGGAATTCCAAAATCATTTGGTAACATCTGTTCCTTAGTCTCATTACACATGTCCAATAACAAGTTGAGTGAAGA GCTTTCAGGGATAATTCATAATTTGTCTTGTGGGTGTGCCAAACACTCACTTCAAGAATTGAGATTTGATGGGAACCAAA TTACTGGCACAGTATCTGACATGTCAGTGTTCACATCTTTAGTAACACTTGTCCTATCTCATAATCTTTTGAATGGGACA ATACCTGAAAATATTAGATTCCCACCTCAGCTAAAGAATCTAAATATGGAGTCCAACAACTTGGAAGGTGTGATCAGTGA CTCCCATTTTGCCAACATGTACATGTTGAAAAGTGTGAAGTTAAGCTACAACCCTCTGGTTTTGATGTTCAGTGAAAATT GGATCCCACCCTTCCAATTGGTCTCTATATTTCTAAGTTCTTGCATGTTAGGACCTAAGTTTCCTACATGGTTGCAAACT CAAAAATACATGTATGAGCTTGACATTTCCAATGCTGGTATCTCAGATGCAGTTCCAATGTTGTTTTGGTACCAAACCAC AATGCTAAAGTACATGAATATTTCACACAACAATCTCACAGGCACTGTTCCAAATTTGCCCATAAGGTTCTATGTAGGCT GCCATGTACTTTTGGCTTCAAATCAATTTACAGGCTCAATCCCATCTTTTCTAAGAAGTGCAGGATCATTAGATTTGTCA AGCAACAAATTTTCAGATTCTCATGAGTTATTATGTGCTAACACCACAATTGATGAATTGGGCATATTAGATCTCTCAAA CAATCAACTACCAAGGCTCCCTGATTGTTGGAGTAATTTCAAAGCATTAGTATTTCTGGATTTGAGTGACAACACTTTGT CAGGGAAAGTGCCACATTCTATGGGATCACTACTTGAACTTAAAGTATTGATATTGAGGAACAATAACTTAACTGGGAAG TTGCCTATCTCCTTGAGAAATTGCGCCAAGTTGGTCATGCTAGACCTTGGAGAAAACAGATTATCTGGAGCAATACCTTC TTGGTTAGGACAAGAATTGCAAATGTTAAGCTTAAGAAGGAACCAATTCTCAGGAAGTCTTCCACATAATCTTTGTTTCA TAACAAGTATTCAACTGTTGGACCTCTCAGCTAACAATCTGCGGGGACGCATTTTCAAATGCTTAAAGAATTTCACTGCA ATGTCTAAGAAGAATTTCTCAACCTCAAACATGGTAATTTACATTAGTAAGCTTAGCTCTTTCTTTGCAACCTATGATTT GAATGCATTGTTGGTGTGGAAAGGTGCTGAACAAGTGTTCAAGAATAACAAGCTCCTTTTAAGGAGCATAGACCTTTCAA GCAATCAGTTGACAGGAGACATTCCAGAAGAAATAGGAGACTTGGTAGGCTTGGTGTCATTGAACATATCAAGCAACAAT TTGAGTGGAGAAATTACTTCAAAGATTGGAAGGTTAACATCACTTGAGTTTCTTGACTTGTCTAGGAACCATTTCTTTGG TTCAATTCCACCTACTCTTGCTCAAATTGATCGCCTCGCCATGTTAGACCTGTCCTATAACAACCTGTGTGGAAGAATCC CACTTGGAACACAGTTACAGAGTTTTGATGCCTCAAGTTATGAAGGAAATGCTGATCTTTGTGGGAAGCCACTTGATAAA AAGTGTCCAGGAGATGAAGAAGCACCCCAAGAACCAAAATCACATAAAGAAACTAGTCCAGAAGATAATAAATCAATTTA TTTGAGTGTGGCATTGGGATTTATCACAGGATTTTGGAGCCTATGGGGTTCCTTGCTACTCAGTGATACTTGGAGACATA CATACATGTTGTTCTTGAACAACATAATAGACACAGTTTATGTTTTTACAGCAGTGAGTGCAGCTAAGTTTCAAAGGTGG CTCAAAGGCTTGATGGTAACATTTTTTCTTTTCCTATATGTTGGGTAGAACTTAAGCACCCATGCTCAATTTGCTTATAG ATTAATAAGTTTTCTTCATGAACTAATGACATGAACTTGAATTAGTTTAAACTTATTTGTCAAATGATCTAAGCTCCTGT TGATAGGTTAACCAGTTTATTGTTATTTCCTTAGATATGCCACCTAAATTTTATATAAATCTCTGGCATTTCTAAGAAAA ATAACATTAAACTTAAGAACATGGTATTGGTAGATGTTTGATTACCATTGAGCAATATATTAGGTTCAAGTGTTGTGTAT GAAAAAAAAACCTGCTAGGAGAGCTAGATATTTGCTCATGGCTAGAACATGTGTAAGACAAAAAAAAATTAAGACTTGAA TATTTAGTTAAATGAATAATGAAAAGTCTGCATTACTAAAACATACACATAGCTTATATATGGTGTTATCTTTCAAATTA TTTCCAGCTCCATGTTTCCATCCGCTTATTTCTTTTCAAGCTTAAACACATCTTTTATTTAATTGTTTTTTTTCCTAATA TTTAATTGTTTATTTGTTTGTTTGTTTTATTTATGTTAAACTCAAGCATACCTTCTGATAATTTTATACTTTCCACAGGA AAAGTATTAAGTATGTATAGCTTAAAAGCATCTCCTGAGCTGAGGTTGAACCATTTGCAACTAAACTATGTTCAAGAAAG ATACCAGAAAAGATTGCAGCTCTGATCAGACAAATATAAATGAATTCAGAGTTCTCTTTATCAATGGTTTAGATTATCAA ATGTTGAAGTTTATGTGGTGGACACTCTCTATTCTGTTATTGAGAAAATTGTGTTCTTTTTTATGAAATTATGGAATATC ATTATAAGATGCTCCTCTTCATGTTGCCTAGTTATAAGAAAGTTATTTGAAAAATGGACAGGAATTAAATTTTGCAAGCC TTAAAAATGATTTAGTCGCTATAAAGTATACTTCT 

CDS sequence (LotjaGi1g1v0063200.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGATGAGGAGTTCTGTGTCTCTCAAGTTCCTTGGAGCAATCTGTGTGGTGTCTTTGTTGCTGCACCAACACCTTCCTCT GTCCAACTATTACAAAGCTTCAGCTGCAGAACAAGTTGGGTGCATTGAGAAGGAGAGGCACACTCTCCTTGAGTTAAAAG CAGGCTTGGTGCTTGATGACACCACCCTTTTGCCTTCTTGGAAAAGTGATTCTGGCAATAGCAGCACTGATTGCTGTGAA TGGAAAGGAGTCAGTTGTAGTAAAAAAACTGGTCATGTTGAAATGCTTGATCTAAATGGCGATCATTTTGGTCCATTTCG AGGCGAGATAAGCTCATCATTGATCAAGTTGAAACATCTAAAACATTTGAATCTCAGTCGGAATCGGTTCATACACAACC CTCCTATTCCAAGCTTCTTTGGTTCTCTAAGCAGATTGAGATTACTTGATCTCAAAGGTTCACATTTTGGTGGAAGAATT CCAAATGATCTTGCCAACCTTTCACACTTGCAATACCTTGATCTTTCATCTAACAACCTGGAGGGTACAATCCCTCAACA ACTTGGAAACCTCTCTCATTTGCAGTATCTTGATCTGGGTGTGAACTCTCTTGTTGGAACAATCCCGCATCAACTTTGCA GTCTCTCGAACTTGCAGGAGCTTCATCTTGGATACACTAAAGGACTCAAAATTGATCATGACCAGAATCATGAGTGGTCC AATCTCACTCATTTAACCCATCTAGACTTGAGTCAGGTGCATAATCTAAACCGTTCTCATGCGTGGCTTCAAATGATTGG TATGCTTCCAAAACTACAAAAACTGGTGTTGTATGATTGTGATCTTTCAGATCTTTTTCTCCGTTCTCTATCTCCTTCAG CATTAAATTTCTCTACTTCCCTTACTATACTCGATCTTTCTCGGAATAATTTCACATCATCTTTAATATTCCAATGGGTG TTTAATGCTTGCTCCAACATAACCCAGCTTGATCTTAGCCTTAACAACTTGGAAGGTCCCATTCTTTATGATTTTGGCAA CATCAGAAATCCTCTTGCACATCTTTACCTGTCTTATAATAATGAACTACAGGGTGGAATTCTGGAATCCATTAGTAATA TTTGTACCTTACGCACGTTGTACATTGACTCCATCAATTTGAATGAGGACATCTCAACAATTCTTCTTAGCTTTTCTGGT TGTGCTAGATCCTCACTGCAAATATTTAGTTTATTTTACAACCAAATTTCTGGCACATTATCAGAACTTTCAATGTTTCC CTCTCTAAAAGAATTAGACCTTTCAGATAATCAGTTAAATGGGAAGCTGCCAGAAGCTGATAAATTGCCATCTAAATTGG AGTCTTTGATAGTCAAATCAAACTCTTTGCAAGGTGGAATTCCAAAATCATTTGGTAACATCTGTTCCTTAGTCTCATTA CACATGTCCAATAACAAGTTGAGTGAAGAGCTTTCAGGGATAATTCATAATTTGTCTTGTGGGTGTGCCAAACACTCACT TCAAGAATTGAGATTTGATGGGAACCAAATTACTGGCACAGTATCTGACATGTCAGTGTTCACATCTTTAGTAACACTTG TCCTATCTCATAATCTTTTGAATGGGACAATACCTGAAAATATTAGATTCCCACCTCAGCTAAAGAATCTAAATATGGAG TCCAACAACTTGGAAGGTGTGATCAGTGACTCCCATTTTGCCAACATGTACATGTTGAAAAGTGTGAAGTTAAGCTACAA CCCTCTGGTTTTGATGTTCAGTGAAAATTGGATCCCACCCTTCCAATTGGTCTCTATATTTCTAAGTTCTTGCATGTTAG GACCTAAGTTTCCTACATGGTTGCAAACTCAAAAATACATGTATGAGCTTGACATTTCCAATGCTGGTATCTCAGATGCA GTTCCAATGTTGTTTTGGTACCAAACCACAATGCTAAAGTACATGAATATTTCACACAACAATCTCACAGGCACTGTTCC AAATTTGCCCATAAGGTTCTATGTAGGCTGCCATGTACTTTTGGCTTCAAATCAATTTACAGGCTCAATCCCATCTTTTC TAAGAAGTGCAGGATCATTAGATTTGTCAAGCAACAAATTTTCAGATTCTCATGAGTTATTATGTGCTAACACCACAATT GATGAATTGGGCATATTAGATCTCTCAAACAATCAACTACCAAGGCTCCCTGATTGTTGGAGTAATTTCAAAGCATTAGT ATTTCTGGATTTGAGTGACAACACTTTGTCAGGGAAAGTGCCACATTCTATGGGATCACTACTTGAACTTAAAGTATTGA TATTGAGGAACAATAACTTAACTGGGAAGTTGCCTATCTCCTTGAGAAATTGCGCCAAGTTGGTCATGCTAGACCTTGGA GAAAACAGATTATCTGGAGCAATACCTTCTTGGTTAGGACAAGAATTGCAAATGTTAAGCTTAAGAAGGAACCAATTCTC AGGAAGTCTTCCACATAATCTTTGTTTCATAACAAGTATTCAACTGTTGGACCTCTCAGCTAACAATCTGCGGGGACGCA TTTTCAAATGCTTAAAGAATTTCACTGCAATGTCTAAGAAGAATTTCTCAACCTCAAACATGGTAATTTACATTAGTAAG CTTAGCTCTTTCTTTGCAACCTATGATTTGAATGCATTGTTGGTGTGGAAAGGTGCTGAACAAGTGTTCAAGAATAACAA GCTCCTTTTAAGGAGCATAGACCTTTCAAGCAATCAGTTGACAGGAGACATTCCAGAAGAAATAGGAGACTTGGTAGGCT TGGTGTCATTGAACATATCAAGCAACAATTTGAGTGGAGAAATTACTTCAAAGATTGGAAGGTTAACATCACTTGAGTTT CTTGACTTGTCTAGGAACCATTTCTTTGGTTCAATTCCACCTACTCTTGCTCAAATTGATCGCCTCGCCATGTTAGACCT GTCCTATAACAACCTGTGTGGAAGAATCCCACTTGGAACACAGTTACAGAGTTTTGATGCCTCAAGTTATGAAGGAAATG CTGATCTTTGTGGGAAGCCACTTGATAAAAAGTGTCCAGGAGATGAAGAAGCACCCCAAGAACCAAAATCACATAAAGAA ACTAGTCCAGAAGATAATAAATCAATTTATTTGAGTGTGGCATTGGGATTTATCACAGGATTTTGGAGCCTATGGGGTTC CTTGCTACTCAGTGATACTTGGAGACATACATACATGTTGTTCTTGAACAACATAATAGACACAGTTTATGTTTTTACAG CAGTGAGTGCAGCTAAGTTTCAAAGGTGGCTCAAAGGCTTGATGGAAAAGTATTAA 

Protein sequence (LotjaGi1g1v0063200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MMRSSVSLKFLGAICVVSLLLHQHLPLSNYYKASAAEQVGCIEKERHTLLELKAGLVLDDTTLLPSWKSDSGNSSTDCCE WKGVSCSKKTGHVEMLDLNGDHFGPFRGEISSSLIKLKHLKHLNLSRNRFIHNPPIPSFFGSLSRLRLLDLKGSHFGGRI PNDLANLSHLQYLDLSSNNLEGTIPQQLGNLSHLQYLDLGVNSLVGTIPHQLCSLSNLQELHLGYTKGLKIDHDQNHEWS NLTHLTHLDLSQVHNLNRSHAWLQMIGMLPKLQKLVLYDCDLSDLFLRSLSPSALNFSTSLTILDLSRNNFTSSLIFQWV FNACSNITQLDLSLNNLEGPILYDFGNIRNPLAHLYLSYNNELQGGILESISNICTLRTLYIDSINLNEDISTILLSFSG CARSSLQIFSLFYNQISGTLSELSMFPSLKELDLSDNQLNGKLPEADKLPSKLESLIVKSNSLQGGIPKSFGNICSLVSL HMSNNKLSEELSGIIHNLSCGCAKHSLQELRFDGNQITGTVSDMSVFTSLVTLVLSHNLLNGTIPENIRFPPQLKNLNME SNNLEGVISDSHFANMYMLKSVKLSYNPLVLMFSENWIPPFQLVSIFLSSCMLGPKFPTWLQTQKYMYELDISNAGISDA VPMLFWYQTTMLKYMNISHNNLTGTVPNLPIRFYVGCHVLLASNQFTGSIPSFLRSAGSLDLSSNKFSDSHELLCANTTI DELGILDLSNNQLPRLPDCWSNFKALVFLDLSDNTLSGKVPHSMGSLLELKVLILRNNNLTGKLPISLRNCAKLVMLDLG ENRLSGAIPSWLGQELQMLSLRRNQFSGSLPHNLCFITSIQLLDLSANNLRGRIFKCLKNFTAMSKKNFSTSNMVIYISK LSSFFATYDLNALLVWKGAEQVFKNNKLLLRSIDLSSNQLTGDIPEEIGDLVGLVSLNISSNNLSGEITSKIGRLTSLEF LDLSRNHFFGSIPPTLAQIDRLAMLDLSYNNLCGRIPLGTQLQSFDASSYEGNADLCGKPLDKKCPGDEEAPQEPKSHKE TSPEDNKSIYLSVALGFITGFWSLWGSLLLSDTWRHTYMLFLNNIIDTVYVFTAVSAAKFQRWLKGLMEKY 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 35 35 -
Phobius 1 9 9 -
SignalP_GRAM_POSITIVE 1 35 35 -
SignalP_EUK 1 26 26 -
Phobius 10 21 12 -
PANTHER 14 175 162 2.3E-181
PANTHER 14 175 162 2.3E-181
Phobius 22 35 14 -
Phobius 36 1048 1013 -
Gene3D 40 228 189 6.1E-52
Pfam 44 87 44 1.3E-10
SUPERFAMILY 75 395 321 6.63E-45
SMART 117 142 26 65.0
ProSiteProfiles 119 140 22 6.387
PANTHER 164 424 261 2.3E-181
PANTHER 164 424 261 2.3E-181
SMART 167 190 24 33.0
Pfam 168 226 59 3.0E-9
ProSiteProfiles 169 192 24 6.672
PRINTS 170 183 14 4.4E-5
SMART 191 215 25 32.0
ProSiteProfiles 193 216 24 5.001
Gene3D 229 591 363 3.5E-58
SMART 269 292 24 390.0
ProSiteProfiles 271 291 21 4.678
Pfam 298 312 15 0.89
ProSiteProfiles 300 319 20 5.494
ProSiteProfiles 326 347 22 4.632
SUPERFAMILY 352 664 313 5.02E-40
ProSiteProfiles 405 427 23 5.409
PRINTS 426 439 14 4.4E-5
SMART 426 456 31 65.0
Pfam 427 441 15 0.51
ProSiteProfiles 428 450 23 7.681
SMART 474 497 24 220.0
ProSiteProfiles 476 498 23 5.918
ProSiteProfiles 506 528 23 5.032
SMART 527 551 25 140.0
ProSiteProfiles 529 551 23 5.633
ProSiteProfiles 553 574 22 5.502
Gene3D 595 1028 434 6.4E-110
PANTHER 616 1081 466 2.3E-181
PANTHER 616 1081 466 2.3E-181
ProSiteProfiles 651 673 23 5.225
SUPERFAMILY 678 1021 344 1.28E-55
SMART 694 717 24 210.0
ProSiteProfiles 696 717 22 4.978
SMART 720 743 24 23.0
ProSiteProfiles 722 743 22 6.665
ProSiteProfiles 745 767 23 5.024
SMART 767 791 25 220.0
ProSiteProfiles 769 792 24 5.417
ProSiteProfiles 793 815 23 5.032
ProSiteProfiles 909 931 23 6.018
ProSiteProfiles 933 955 23 5.032
SMART 955 979 25 27.0
ProSiteProfiles 957 979 23 5.71
ProSiteProfiles 981 1003 23 5.656
MobiDBLite 1021 1044 24 -
TMHMM 1049 1071 23 -
Phobius 1049 1070 22 -
Phobius 1071 1076 6 -
Phobius 1077 1098 22 -
TMHMM 1078 1100 23 -
Phobius 1099 1111 13 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0063200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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