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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0065900 |
| Transcript ID | LotjaGi1g1v0065900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like protein kinase; TAIR: AT2G33580.1 Protein kinase superfamily protein; Swiss-Prot: sp|O22808|LYK5_ARATH Protein LYK5; TrEMBL-Plants: tr|D3KU01|D3KU01_LOTJA LysM type receptor kinase; Found in the gene: LotjaGi1g1v0065900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:9093721..9097010) extracted from Lotus japonicus Gifu genome v1.2.
AAGACTTTTAAAATAATCCCAAAACAAAACGTGTTGACTGGCTGACTTCACTGGTTTGCCACCCCATTCCATACGATACA ATGCAATAATGTTGGTGGTCAGGACCAGAAAAAATTCCAACCCTTCTTAGACGCTTTCATTGAATTTCATTGACACAAAC ACACCCAACCAGAAAGTGTTGAATTATAAATTAAGCACTTCATCCAATTCAAACCTCTAGTGTAGCAAGCACTTTCCACC CACAAAACCAACCTCCTTCATTTCCTTCATCACAAGATGCTGTTGTTTACCTCATCTAGTTCCAATAGCATTACCACCAT CACTATGTTATTGTTGGTGATGATAATTTCATTTTCACACATGATCCCATCAACACAAGCACAACAAGAGTATGTGAACA ACAAGCAACTAGATTGTGATACTCAATACAACACCACATATGGCAACGTTTGCAATAGTGTCACTTCATGCCAATCCTAC CTCACCTTCAAATCATCATCCCCTGAATACAACACACCTTCTTCAATCTCCTACCTCCTCAACTCCACACCCTCCCTCGT CGCTAAATCCAACAACATCACCGACGTCACCCCCATCATCACCGACACCATGGTCACCGTCCCCGTCACCTGCTCCTGCT CCGGCGGCCGCTACCAACACAACGCCACCTACAACTTGAAGAAAACAGGGGAGACTTACTTCTCCATCGCCAACAACACC TACCAGTCCCTCACTACTTGTCAAGCCCTCATGGCTCAGAACCCCTACGATGCTAAGAACCTCTTCGCCGGTGATGACCT CCATGTGCCTCTCCGGTGCGCTTGCCCCACCAAGAAACAGAGTGATGCAGGGTTCAAGTACCTGCTCACCTACCTGGTTT CTCAAGGGGAGTCGCCAGATTCCATTGCTGAGATCTTTGGTGTTGATACACAGAGTGTTTTGGATGCCAACGAGCTTGAT TCTAAATCCGTCGTTTTCTACTTCACACCGCTGTTGGTTCCTCTTAAAACAGAGCCACCGGCGAGGTTACAGATAGCAGC GTCGCCGCCGGAGTCTCCACCGCCAGCTCCGGCGGGTAATGATAGTTCCAGCTCTTCCAAGAAATGGGTCATCGTCGGTG TCACGGTTGGGGTTGCTGTGTGCCTCGTTGTGGCTCTTCTCGTGTTTTTCCTCTGTTTCTACAATCGTCGCCGCCGTCAG CCGGCGCCGCCACCGGTATCGGTTAAGGATTTCCCGGACTCTGCCGTCAAGATGGTGTCGGAAACCACCCCCACAACCGA ATCCTGGTCACTTTCTTCAGAAGGGGTTCGCTATGCGATTGAGTCGTTGACCGCGTACAAGTTCGGGGACATACAAACCG CTACAAAGTTCTTCAGCGAAGAGAACAAGATCAAAGGGTCTGTTTACAGAGCTTCTTTCAAAGGTGATGATGCTGCTGTG AAGATTCTCAATGGTGATGTCTCTGCTGAGATCAACCTTCTCAAGAGGATCAACCATGCCAACATTATAAGGCTATCTGG TTTTTGTGTGCACAAAGGTAACACCTATCTTGTTTATGAGTTTGCTGAGAATGATTCTCTTGATGATTGGCTTCATAGTG ACAAGAAGTATCAGAATTCAGTGTCTTTAAGTTGGATGCAGAGGGTTCAGATTGCTTATGATGTAGCTGATGCTCTCAAT TACCTTCATAACTATACCAACCCTATTCACATTCACAAGAATTTGAAAAGTGGTAATGTTCTTTTGGATGGGAAATTCAG AGCTAAAGTTTCAAATTTCGGGTTAGCTAGGGTCATGGAGGATCAAGGAGAGGATGGGGGGTTCCAAATGACAAGGCATG TGGTGGGGACTCAAGGTTACATGCCACCTGAGTACATTGAGAGTGGTTTGATTACTCCAAAGATGGATGTTTTTGCATTT GGAGTTGTGATGTTGGAGCTTCTTTCAGGAAGAGAAGCCACAAGTAGTGGGGAAAAGAATGGATTAGGGGAGAACAAGAT GCTGTCAGAAACTGTGAATCATGTGCTTGAAGGAGACAATGTTAGGGACAAGCTTCGAGGTTTCATGGATCCAACTTTGA GGGATGAGTACCCTTTGGATTTGGCTTACTCCATGGCTGAGATTGCCAAACGATGTGTTGCCCATGACCTCAATTCAAGA CCAAACATTTCTGAGGTTCTCATGACTCTGTCTAAGGTTCAATCCACTACACTGGATTGGGATCCATCTGATGAACTCGA ACGGTCCAGATCTGTTAGCCAAATTTCTGAAAGCTGATAGTTGATGCATATAATATGATGTTTGGAAATCATCTTACAAT TGATTCTGAAGCCATAATAAATTCTGTGAATAAGCTTCTGTAGAGAAGATTCTGTAATTCATAATTGATTCTGATGAAAA ATACGTTGATCCTTTCATGCTATATTCCTCTCAAGAATTTTAGCATTATGGTATTGGCCAATTGCTTCATCCCCAGGTCT CATTTGGAGGATTTTGTTGGCCTCTTTTGTGTCATTACATAACTTGCATTGCTGGTTCATGGACTAGAACTATTGGATCC ACTGCTGCTGAATTCTTGTGGTTACAGCAACTTCTTAAGGAGCTACAATTTTCATTACCTAAAGTTCCATGTATTTTTTC AAATAACATCAATGCTACTTATGTGTGCTTAAATCTTGTCTTTCATTCTCATATGAAACATGTTGCAATTGACTGTCATT TTGTACATGATCTTGTTGCTCAAACAGAATTTCAAATTGCTCATGTTCCATCTAGTCATCAATTGGCGGATTTGCTCACA GAAACCACTTTCTGGACCAAGCCACAATTTTCTAAAGAACAAGAAAATTGGTGTTCTCTCTGCCTCCACCATCTTGAGTG GGCATATTGGAGTACTGACTTAGTCTAAGATGTTGATGTCTCCTTTAATTTTCTATTGTTTATCTGTCATAACAAATAGC AAGATTCTTAGATACTCTTATAGGATATAGTTTAGTTATATTTGAATTTGATTGTGCAACAAACTGGTATGTTGTTGCTG TCATGTGTGTATATATGTTACCTCTGCTCTATTGTTAATTAATGAAAGATATACCAGATTCATTTAACTCTTTTTATGGT TTGTGTTTGATTATGTTATAAGCATTGGTTTGCAAAGTTAATATACCAGATTCATTTAACTCTTTTGAAGGGCTGAGAGA TCCCTGCAGTTTTGTTTCAAAATGAAGAGAACCATAATCCATAAATTAGTTAACATATTCATCGAATTGAAATTGTTACT TCACTAATAA
CDS sequence (LotjaGi1g1v0065900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTGTTGTTTACCTCATCTAGTTCCAATAGCATTACCACCATCACTATGTTATTGTTGGTGATGATAATTTCATTTTC ACACATGATCCCATCAACACAAGCACAACAAGAGTATGTGAACAACAAGCAACTAGATTGTGATACTCAATACAACACCA CATATGGCAACGTTTGCAATAGTGTCACTTCATGCCAATCCTACCTCACCTTCAAATCATCATCCCCTGAATACAACACA CCTTCTTCAATCTCCTACCTCCTCAACTCCACACCCTCCCTCGTCGCTAAATCCAACAACATCACCGACGTCACCCCCAT CATCACCGACACCATGGTCACCGTCCCCGTCACCTGCTCCTGCTCCGGCGGCCGCTACCAACACAACGCCACCTACAACT TGAAGAAAACAGGGGAGACTTACTTCTCCATCGCCAACAACACCTACCAGTCCCTCACTACTTGTCAAGCCCTCATGGCT CAGAACCCCTACGATGCTAAGAACCTCTTCGCCGGTGATGACCTCCATGTGCCTCTCCGGTGCGCTTGCCCCACCAAGAA ACAGAGTGATGCAGGGTTCAAGTACCTGCTCACCTACCTGGTTTCTCAAGGGGAGTCGCCAGATTCCATTGCTGAGATCT TTGGTGTTGATACACAGAGTGTTTTGGATGCCAACGAGCTTGATTCTAAATCCGTCGTTTTCTACTTCACACCGCTGTTG GTTCCTCTTAAAACAGAGCCACCGGCGAGGTTACAGATAGCAGCGTCGCCGCCGGAGTCTCCACCGCCAGCTCCGGCGGG TAATGATAGTTCCAGCTCTTCCAAGAAATGGGTCATCGTCGGTGTCACGGTTGGGGTTGCTGTGTGCCTCGTTGTGGCTC TTCTCGTGTTTTTCCTCTGTTTCTACAATCGTCGCCGCCGTCAGCCGGCGCCGCCACCGGTATCGGTTAAGGATTTCCCG GACTCTGCCGTCAAGATGGTGTCGGAAACCACCCCCACAACCGAATCCTGGTCACTTTCTTCAGAAGGGGTTCGCTATGC GATTGAGTCGTTGACCGCGTACAAGTTCGGGGACATACAAACCGCTACAAAGTTCTTCAGCGAAGAGAACAAGATCAAAG GGTCTGTTTACAGAGCTTCTTTCAAAGGTGATGATGCTGCTGTGAAGATTCTCAATGGTGATGTCTCTGCTGAGATCAAC CTTCTCAAGAGGATCAACCATGCCAACATTATAAGGCTATCTGGTTTTTGTGTGCACAAAGGTAACACCTATCTTGTTTA TGAGTTTGCTGAGAATGATTCTCTTGATGATTGGCTTCATAGTGACAAGAAGTATCAGAATTCAGTGTCTTTAAGTTGGA TGCAGAGGGTTCAGATTGCTTATGATGTAGCTGATGCTCTCAATTACCTTCATAACTATACCAACCCTATTCACATTCAC AAGAATTTGAAAAGTGGTAATGTTCTTTTGGATGGGAAATTCAGAGCTAAAGTTTCAAATTTCGGGTTAGCTAGGGTCAT GGAGGATCAAGGAGAGGATGGGGGGTTCCAAATGACAAGGCATGTGGTGGGGACTCAAGGTTACATGCCACCTGAGTACA TTGAGAGTGGTTTGATTACTCCAAAGATGGATGTTTTTGCATTTGGAGTTGTGATGTTGGAGCTTCTTTCAGGAAGAGAA GCCACAAGTAGTGGGGAAAAGAATGGATTAGGGGAGAACAAGATGCTGTCAGAAACTGTGAATCATGTGCTTGAAGGAGA CAATGTTAGGGACAAGCTTCGAGGTTTCATGGATCCAACTTTGAGGGATGAGTACCCTTTGGATTTGGCTTACTCCATGG CTGAGATTGCCAAACGATGTGTTGCCCATGACCTCAATTCAAGACCAAACATTTCTGAGGTTCTCATGACTCTGTCTAAG GTTCAATCCACTACACTGGATTGGGATCCATCTGATGAACTCGAACGGTCCAGATCTGTTAGCCAAATTTCTGAAAGCTG A
Protein sequence (LotjaGi1g1v0065900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLLFTSSSSNSITTITMLLLVMIISFSHMIPSTQAQQEYVNNKQLDCDTQYNTTYGNVCNSVTSCQSYLTFKSSSPEYNT PSSISYLLNSTPSLVAKSNNITDVTPIITDTMVTVPVTCSCSGGRYQHNATYNLKKTGETYFSIANNTYQSLTTCQALMA QNPYDAKNLFAGDDLHVPLRCACPTKKQSDAGFKYLLTYLVSQGESPDSIAEIFGVDTQSVLDANELDSKSVVFYFTPLL VPLKTEPPARLQIAASPPESPPPAPAGNDSSSSSKKWVIVGVTVGVAVCLVVALLVFFLCFYNRRRRQPAPPPVSVKDFP DSAVKMVSETTPTTESWSLSSEGVRYAIESLTAYKFGDIQTATKFFSEENKIKGSVYRASFKGDDAAVKILNGDVSAEIN LLKRINHANIIRLSGFCVHKGNTYLVYEFAENDSLDDWLHSDKKYQNSVSLSWMQRVQIAYDVADALNYLHNYTNPIHIH KNLKSGNVLLDGKFRAKVSNFGLARVMEDQGEDGGFQMTRHVVGTQGYMPPEYIESGLITPKMDVFAFGVVMLELLSGRE ATSSGEKNGLGENKMLSETVNHVLEGDNVRDKLRGFMDPTLRDEYPLDLAYSMAEIAKRCVAHDLNSRPNISEVLMTLSK VQSTTLDWDPSDELERSRSVSQISES
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 35 | 35 | - | – | |
| Phobius | 1 | 11 | 11 | - | – | |
| SignalP_EUK | 1 | 35 | 35 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 35 | 35 | - | – | |
| TMHMM | 10 | 32 | 23 | - | – | |
| Phobius | 12 | 23 | 12 | - | – | |
| PANTHER | 20 | 655 | 636 | 1.6E-277 | – | |
| PANTHER | 20 | 655 | 636 | 1.6E-277 | – | |
| Phobius | 24 | 35 | 12 | - | – | |
| Phobius | 36 | 276 | 241 | - | – | |
| ProSiteProfiles | 130 | 177 | 48 | 6.665 | ||
| SMART | 131 | 178 | 48 | 2.1 | ||
| Pfam | 136 | 178 | 43 | 0.002 | ||
| Gene3D | 136 | 189 | 54 | 1.4E-7 | ||
| Gene3D | 190 | 234 | 45 | 1.4E-7 | ||
| ProSiteProfiles | 197 | 241 | 45 | 10.036 | ||
| SMART | 198 | 242 | 45 | 0.47 | ||
| Pfam | 199 | 235 | 37 | 0.038 | ||
| MobiDBLite | 252 | 272 | 21 | - | – | |
| TMHMM | 277 | 299 | 23 | - | – | |
| Phobius | 277 | 302 | 26 | - | – | |
| Phobius | 303 | 666 | 364 | - | – | |
| Gene3D | 327 | 429 | 103 | 4.0E-15 | – | |
| SUPERFAMILY | 345 | 636 | 292 | 1.37E-61 | ||
| ProSiteProfiles | 345 | 646 | 302 | 31.185 | ||
| Pfam | 393 | 635 | 243 | 2.2E-38 | ||
| Gene3D | 430 | 657 | 228 | 2.9E-53 | – | |
| MobiDBLite | 646 | 666 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0065900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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