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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0074700 |
| Transcript ID | LotjaGi1g1v0074700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat-containing protein, putative; TAIR: AT2G03430.1 Ankyrin repeat family protein; Swiss-Prot: sp|Q08DV6|ASB3_BOVIN Ankyrin repeat and SOCS box protein 3; TrEMBL-Plants: tr|I1JIE8|I1JIE8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0074700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:10801351..10803782) extracted from Lotus japonicus Gifu genome v1.2.
CAGACAAGTCATGTTGTATGACTTTATCATCTTGAAGAGCTTTGTGCTGACTGTCACGTGGGTAAAATTTCTAGCATATT TAATGGTCACATGAAACAATTTTCTGTCATTATTCAATCTTTTATCATATCATGCTCTTATCCTATCTTGACCACCAAAC GAGTCATGTTAAATGACTTTATCATCTCGAAGAGCTTTGAGCTTTGTGTTGGGTGTCACGTGGGTAAAATTTCTAGCATA TTCCATGGTCACGTGATACCCTTTTCTTTTCTTTTCTTTTCTTTTCTCATCTATATATATATATATATATATCATCAACA ATCATGATGAAGGGCCATCCCCATCGCATCAACATAGAACAACAACAACAACAACTGAACAACAATAACAAAACAACCAG TGTTGGTGAAAATGGAGAGGCTAGTGGAAGTGTGCGAACCTTCAGAGGTTCAGATAGAGTTCGCCCTGAACTGCAAATGC CGAACCACAATTCAGCTCCGATCCTTAAGCCAAACCACACCAGTAGCCTTCAAAATCCAAACCTCATCACCCAACAAGTT CCTGGTCAACCCACCGAGTGGACTCATTCCCCCACTCTCCTCCGCCACCTTCCAAGTCATCCTCAAGCCTCAGCCCCACC TCCCCCAATCCTACCCCCGCTCCCCCTCCGACCGCTTCCTCATCAAAACCGCCGAGTTTAACACCGACTCGTCCGTTCCG ACTCACCCCGATTCCATCAACTCATGGTTCGCTTCCCGCCCCAAAGACTTCTCCACCATCGACCTCAAACTCAAGGTGGC TTTCGTGGGGCCGCTTCTCCTCCACGACGCCGTTTCGCGTGGGGATTTGGAGGCTGTCAGGAACTTGATCAGACGGCGGC GTCCGGCGCTCGCGGATTTGCCCCCTGCTGAGTCTGACTCGCTACTCCGAGTTGCCACCGAGTTGGCTGATCCGAATGAC ATGGTTTATCTTCTGCTTGAGGCCGGGTTGAGAGTTCACGGGCCAGTGAGATCTGATCTTTTCCTCGCCTGTGATGAGGT ACACGTGGCGGATGATTCCTTCACCTTTTTGTCCTACATGTTAACATTATAAACCAATGTTTTTCTTTTAGCTAAATGAA TACAAATGGACAAATTTTAATAATTTTGATCTTAGTTTTTACTTTAGTGATTTTGATTCTAAATTCTTTCCTCATATTAC AATCAGATCTATCTAATGGTTTTTAATTCAATTCTTAATAGAATTTGTAATATATGACATAACCCATATGAATATGAATT AAAGTGACATGTAACTCCTGTTTTGACATATGAGCATAGTATCATGGTCCAAACATTTGCGCGTCATTCAATCGACATAC GCATTTTATTGCGAATTTGAGATTTTGACCGTCATTAATGTGCATTCTCTTGTAAATTAAAATATGGAATACATTTTGGA AAATACATTTGAGAAATTGAAATTCTGAATGTAATTTTTTAAAATACAATTCGAAATTTAGTTTTTAAAATGTATCTTTC AAAATACTCTACAATTTAATTTCCGCGGAGTGTTGTCATTTTTCCTGTTCGAAACTGCATATGTCTATTGAATGTCAACA TTGTAAACGGGTTTAGAAATCATTTTCCTTATTGCACACGTTTTACTCTTTTAGTCGTTTTGTAAAGATGTTTCCTGAAA TAATTTGTGTTCAGGAAGTGGTGGTGTTTATGGAGGAAGGAGAAGCAATACTAGAGGCTTCCAGGCGCGGAGACGTGCGG GAACTTGAGTTCCTGTTACGAGGAGGTGCTGCGAGTGTTAACTACCGTGACCGGTGTGGTTTGACGGCGCTTCATTATGC AGCTTGTAAAGGGCACAAGGATGTGGTGTTGATGCTTGTTGAAGCAGGGTGGGACTTAGAATGTGAGGATGAGGAAGGTC ATGTTCCCCTGCATATGGCTGTGGAGGGTGGCGATTTCGAGACCGTTCAAATTTTGGTTGACAAGGGTGTGAACCTTAAT GCTAGGAACAGCGGGGGTGCTACCCCTTTGTTCATGGCTAGAGGTTGGGGACATGATGATATATATCAGTTGCTTAAGAG CAAGGGTGCATTATGAGCAGTGGCGTATGTATATTGTCATCAAAGATAGAAAACAATTTGGGCCTCATTAGATATAATTT ATGTGAAAATTTTAATTAATTTTAGATGTTTTTAATAAAATTGTTAGGCCATTGCATTGACTCGATGGTAAGCGTGAATC TTGGGTTGCTTTATTTGATATATATGACAGATATATTTGGGTAACTACAGATGATGCTTTTATAGATGGGTTGCTCTGAA TTTGAAATTGACTCAATATGAGTGGAGTTACTGGGTTATGTTAGAGTACACCAGTGTTTTTGAAATTTGAATACGCGCAA GTTATGTATGTGAAGAAACTTTTACCTCAAAT
CDS sequence (LotjaGi1g1v0074700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAGGCTAGTGGAAGTGTGCGAACCTTCAGAGGTTCAGATAGAGTTCGCCCTGAACTGCAAATGCCGAACCACAAT TCAGCTCCGATCCTTAAGCCAAACCACACCAGTAGCCTTCAAAATCCAAACCTCATCACCCAACAAGTTCCTGGTCAACC CACCGAGTGGACTCATTCCCCCACTCTCCTCCGCCACCTTCCAAGTCATCCTCAAGCCTCAGCCCCACCTCCCCCAATCC TACCCCCGCTCCCCCTCCGACCGCTTCCTCATCAAAACCGCCGAGTTTAACACCGACTCGTCCGTTCCGACTCACCCCGA TTCCATCAACTCATGGTTCGCTTCCCGCCCCAAAGACTTCTCCACCATCGACCTCAAACTCAAGGTGGCTTTCGTGGGGC CGCTTCTCCTCCACGACGCCGTTTCGCGTGGGGATTTGGAGGCTGTCAGGAACTTGATCAGACGGCGGCGTCCGGCGCTC GCGGATTTGCCCCCTGCTGAGTCTGACTCGCTACTCCGAGTTGCCACCGAGTTGGCTGATCCGAATGACATGGTTTATCT TCTGCTTGAGGCCGGGTTGAGAGTTCACGGGCCAGTGAGATCTGATCTTTTCCTCGCCTGTGATGAGGAAGTGGTGGTGT TTATGGAGGAAGGAGAAGCAATACTAGAGGCTTCCAGGCGCGGAGACGTGCGGGAACTTGAGTTCCTGTTACGAGGAGGT GCTGCGAGTGTTAACTACCGTGACCGGTGTGGTTTGACGGCGCTTCATTATGCAGCTTGTAAAGGGCACAAGGATGTGGT GTTGATGCTTGTTGAAGCAGGGTGGGACTTAGAATGTGAGGATGAGGAAGGTCATGTTCCCCTGCATATGGCTGTGGAGG GTGGCGATTTCGAGACCGTTCAAATTTTGGTTGACAAGGGTGTGAACCTTAATGCTAGGAACAGCGGGGGTGCTACCCCT TTGTTCATGGCTAGAGGTTGGGGACATGATGATATATATCAGTTGCTTAAGAGCAAGGGTGCATTATGA
Protein sequence (LotjaGi1g1v0074700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MERLVEVCEPSEVQIEFALNCKCRTTIQLRSLSQTTPVAFKIQTSSPNKFLVNPPSGLIPPLSSATFQVILKPQPHLPQS YPRSPSDRFLIKTAEFNTDSSVPTHPDSINSWFASRPKDFSTIDLKLKVAFVGPLLLHDAVSRGDLEAVRNLIRRRRPAL ADLPPAESDSLLRVATELADPNDMVYLLLEAGLRVHGPVRSDLFLACDEEVVVFMEEGEAILEASRRGDVRELEFLLRGG AASVNYRDRCGLTALHYAACKGHKDVVLMLVEAGWDLECEDEEGHVPLHMAVEGGDFETVQILVDKGVNLNARNSGGATP LFMARGWGHDDIYQLLKSKGAL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 201 | 201 | 1.7E-123 | – | |
| Gene3D | 1 | 133 | 133 | 1.6E-18 | ||
| PANTHER | 1 | 201 | 201 | 1.7E-123 | – | |
| SUPERFAMILY | 4 | 142 | 139 | 1.41E-19 | ||
| ProSiteProfiles | 4 | 130 | 127 | 18.122 | ||
| Pfam | 19 | 100 | 82 | 2.9E-14 | ||
| SUPERFAMILY | 131 | 341 | 211 | 1.71E-35 | ||
| SMART | 132 | 162 | 31 | 250.0 | ||
| ProSiteProfiles | 132 | 342 | 211 | 36.445 | ||
| Gene3D | 134 | 342 | 209 | 6.4E-39 | ||
| PANTHER | 209 | 341 | 133 | 1.7E-123 | – | |
| PANTHER | 209 | 341 | 133 | 1.7E-123 | – | |
| SMART | 216 | 246 | 31 | 2600.0 | ||
| ProSiteProfiles | 250 | 282 | 33 | 12.048 | ||
| SMART | 250 | 279 | 30 | 4.3E-5 | ||
| PRINTS | 251 | 266 | 16 | 3.5E-7 | ||
| Pfam | 270 | 321 | 52 | 1.0E-8 | – | |
| SMART | 283 | 312 | 30 | 9.0E-5 | ||
| ProSiteProfiles | 283 | 315 | 33 | 14.426 | ||
| PRINTS | 299 | 313 | 15 | 3.5E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0074700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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