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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0127400 |
| Transcript ID | LotjaGi1g1v0127400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase; TAIR: AT3G55550.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|Q9M2S4|LRKS4_ARATH L-type lectin-domain containing receptor kinase S.4; TrEMBL-Plants: tr|A0A0L9V011|A0A0L9V011_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0127400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:20365274..20368771) extracted from Lotus japonicus Gifu genome v1.2.
AATTTTCAGGAACCAATTTTGCACCTCATACATATGACTCCTCTGTCACACTCCACATAGAAGGTTATCTATTGTTTTGT TCCTATTATTATTATTTTTTGCTTGCTTATTGCCCCAACATGAATGAAGTAACCATGACTCAAGTTGATTGCCTGAATCT TTTTCACCCCTCCAAATAATTTACATCAGATAATTTCAAGTGCCCTTTGGTTTTTAAATTGAGTCCAATTCATTGTTTAG TCAGATTTGCATGATAGTTGGTTAGTTCAAGTGGTGTATGCCTAATTCTTCTTAACCAAATCTTAAATTTGATACTAAGG TATGAAAAAAGAAACTTGTTGGAAAGAACTTGCATCATCGGGATGTGGATGTTCATGACTCAAGTAAGATTGTCTAAGAT ACTTATAATAAGACAAAAAAAATTACATAAAGTATTTGTACCTAATTCACCATGTTTCTAGCCTTATCTGTATTATTAGT TCGGGTACAAATCATATCATCTTGCTGAATGATTGAACTTTTCTCTAATTTCTCTCATGCAATGGCTTCCTTGTTTCATG TCTTTCTCATGTTTTGCATGTTCAATGTTCTAGCCTCCATAGGAACATACCCAGTTACAGTTAATTCAGCTAGTGATGTT CCAATAAATGTTACAAAACACTTTTACTTCCCTGATTTCAGCCTCAACAACAACCCCAGATTAGAACATGATGTGAAGCT CCTAGGTAGTGCCAAGCTCTCAGATCAAAAGGGTGCTCTTCAAATCCCCCATGAATCTCAAGAAACCGACTTGAAACATC TAGCAGGTAGAGGTTTATATTCCTTCCCAATTCGCTTGCTAGATCCCAGTACCAAGACCCCAGCTTCCTTTGAAACCACT TTTGCTTTTCAGCTGCATAATTCCACAACCTCAGTGAGTGGCGGCGGCAGCGGCGGTGGTGGTGTTGGTGGTGCTGCTGC TGCTGATGTTGGTGGTGGTGGTAGTGGCCTCACCTTCATGATAGTCCAAGATGAGTTCACTGTGGGAAGGTCAGGGCCAT GGCTTGGCATGCTCAATGATGCTTGTGAAAATGCTTACAAGGCAGTGGCCGTGGAATTTGACACAAGAATGAGCCCAGAG TTTGGAGATCCAAATGACAATCATGTTGGTGTCAACTTAGGTAGCATCATATCTACCAAAATCATCAATGTTTCTGAATT TGGAGTGTCCCTTAAGGATGGTTTTGTTCACCATGCTTGGATATCCTATGATGGTCCTCAGAGGAGAATGGAAATTCATC TTGGACTACCCAACCAAGAACTCAAACCTTCCAAGCCAATCTTCTCAGAAACGTTGGATCTCTCTCCTTATCTCAATGAG TACATGTTTGTGGGGTTCTCAGCTTCCACAGGTAACCACACCCAAATCCACAACATACTCTCTTGGAACTTCACTTCCAC TAGCCAAGCCGTTCTTCATTTCCCTTCATCAGAAACCTGCCAGGGTAAGATCATGCTTGAGAATACTACAGAAACAACAG CTACCAAGAAGTCTAGTAAGAATGAAATTCCAAGAAGCTTTTTGATCTTTATGGCTGCAGTGGCTTCAGCTGTGGTTGTT CTCATTGGTTTTTACTTTATCAGTAAACTCAGAAGAAATGCTGCCAAATCAAACACTTCAATTGAGGCAGCGATTCACAG ACCAAGACCTCCCAACAAGCCGCGCCGCTTCACTTTCTCTCAACTATCCTCTTCAACAAGATCATACAGTGAGATTGAGT TGCTAGGTAGTGATTCTAGAGGAGTGTACTACAGAGGAAAGCTTCCTAATGGAAGCCAAGTAGCTGTGAAAAGGTTCTCA ACTCAGTTTCTCAACACTCATGGATCCGATAGGAGACGTTTGTTGAAGGAGATCAAAGCGATTAGCCATGCTCGCCACCC GAATTTGCTTCCTGTGAGAGGGTGGTGTCAAGACAACAATGAAATCATGGTGGTCTATGACTTTGTCCCGAATGGAAGCT TAGATAAGTGGCTCTTTGGTGCTGGTGTTCTTCCATGGACTAGAAGGTTCAAAGTTGTAAAAGATGTTGCGGATGGATTA AGCTTCCTCCATGCTAAGCAACTAGCCCACAAGAACTTGAAATGTAGCAGTGTGTTTCTGGATGTAAGTTTCAGATCTGT TTTAGGAGATTTTGGGTTTGTGCTAGTTGGGGCAGAATCAAAACAGTTTGAGGCAATAGTGTCTCTAGGTGCTGATGTGT TTGAGTTTGGTGTGCTTGTGTTGGAAGTGGTAGCTGGAAGACCAAGGGTGGAGATTGATGAGGGAAAACCAGAAGAGAAA AACTTGTTGGATTTTGCTTGGAACTTGCATGAGACTAATGAGAAAGTGAAGCTGGTAGATAGGAGAATGGGATCATTGAT CAACTTGGAGCATGCGATTCGTGTTCTCGAAATCGGGTTGCTTTGCACTCTGAATGAGAACAAAGGGAGGCCCTCTATGG AGCAAGTGGTGGAATTTCTTCTTCACATGGACAAGCCTATTCCTGATCTTCCGAGAACTCGCCCTGTTACCTTGTTTCCT TACAATAGTGCCAACACTGGACTTTGCAACACATACTCTTGCACTTTCAAGTGAACCCATGGTGTTAATCAGAGATGGTT ATGAAAGCAAGTTATTTATAAATGTGGAAGGGGTCATTATTAAGCCCAAATGCAGCAAATGTTTAGTGTGCTTGTGAAGA TGCTTGATAAATATTGTATCATTCTTGCTGGGAGTATTGTGAATATGGACTCTGCAGGAGATAGGGGTGATCATGTTTTC ATGTTCAGTATGCTTATGTTTGGAAAGAGTCAGAATCGATTCTGGAGGAAGTTTTGGTAAGTAACTTCTGGTTGACTGAA TTGATTTCGAGAAAAAATTACTTGATTCAAACATTCTATTACCATTTCTTTTGAAGGTTCACAGCCTAGGTGGTGTATTT GAGCCTTCTTGTTATGTGGTGGGTGAAAATTGGTTATGATTATTGTTATGAAGGGGACAATAGAATCAGTTTTCTTGTGT TATTATTATCCTAGTGGAATAATAAAGGGTACCAATTGGAATCCCACAACTTGGGAATGGTAAAGGCATGATTAGTTAAT AAAGTAGCAATATAAGGTTCTATTAAATAAAGCAAAGATCAATGTTATCAGACTGAGTGCATATTCTTTTATTTTTGCCC CTAAAGTTCTTCTCTCCTAGACTATTACTCCTATCATTTATGTTTGTGTTCTGAGCTCAAAGTTGTCCAGACTATCATTC TATAGAGTAGTTAATCATTCAATCACGCCCATACTTATATAGCAACATAGCATCTGGTTTCAAGTCAAATAGAAGGAATA ATATCACATGGGTTGTTTATAGAAAGTCCCAGACAATATATTAGCTTTTGGAAGTTTTTTTTGGTAAATATTAATTTACT TGACAGAATTGATTTGAACTCTGAAGAAAGTAACATTTTATAAAATCCTTGTTGACAC
CDS sequence (LotjaGi1g1v0127400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATAGTCCAAGATGAGTTCACTGTGGGAAGGTCAGGGCCATGGCTTGGCATGCTCAATGATGCTTGTGAAAATGCTTA CAAGGCAGTGGCCGTGGAATTTGACACAAGAATGAGCCCAGAGTTTGGAGATCCAAATGACAATCATGTTGGTGTCAACT TAGGTAGCATCATATCTACCAAAATCATCAATGTTTCTGAATTTGGAGTGTCCCTTAAGGATGGTTTTGTTCACCATGCT TGGATATCCTATGATGGTCCTCAGAGGAGAATGGAAATTCATCTTGGACTACCCAACCAAGAACTCAAACCTTCCAAGCC AATCTTCTCAGAAACGTTGGATCTCTCTCCTTATCTCAATGAGTACATGTTTGTGGGGTTCTCAGCTTCCACAGGTAACC ACACCCAAATCCACAACATACTCTCTTGGAACTTCACTTCCACTAGCCAAGCCGTTCTTCATTTCCCTTCATCAGAAACC TGCCAGGGTAAGATCATGCTTGAGAATACTACAGAAACAACAGCTACCAAGAAGTCTAGTAAGAATGAAATTCCAAGAAG CTTTTTGATCTTTATGGCTGCAGTGGCTTCAGCTGTGGTTGTTCTCATTGGTTTTTACTTTATCAGTAAACTCAGAAGAA ATGCTGCCAAATCAAACACTTCAATTGAGGCAGCGATTCACAGACCAAGACCTCCCAACAAGCCGCGCCGCTTCACTTTC TCTCAACTATCCTCTTCAACAAGATCATACAGTGAGATTGAGTTGCTAGGTAGTGATTCTAGAGGAGTGTACTACAGAGG AAAGCTTCCTAATGGAAGCCAAGTAGCTGTGAAAAGGTTCTCAACTCAGTTTCTCAACACTCATGGATCCGATAGGAGAC GTTTGTTGAAGGAGATCAAAGCGATTAGCCATGCTCGCCACCCGAATTTGCTTCCTGTGAGAGGGTGGTGTCAAGACAAC AATGAAATCATGGTGGTCTATGACTTTGTCCCGAATGGAAGCTTAGATAAGTGGCTCTTTGGTGCTGGTGTTCTTCCATG GACTAGAAGGTTCAAAGTTGTAAAAGATGTTGCGGATGGATTAAGCTTCCTCCATGCTAAGCAACTAGCCCACAAGAACT TGAAATGTAGCAGTGTGTTTCTGGATGTAAGTTTCAGATCTGTTTTAGGAGATTTTGGGTTTGTGCTAGTTGGGGCAGAA TCAAAACAGTTTGAGGCAATAGTGTCTCTAGGTGCTGATGTGTTTGAGTTTGGTGTGCTTGTGTTGGAAGTGGTAGCTGG AAGACCAAGGGTGGAGATTGATGAGGGAAAACCAGAAGAGAAAAACTTGTTGGATTTTGCTTGGAACTTGCATGAGACTA ATGAGAAAGTGAAGCTGGTAGATAGGAGAATGGGATCATTGATCAACTTGGAGCATGCGATTCGTGTTCTCGAAATCGGG TTGCTTTGCACTCTGAATGAGAACAAAGGGAGGCCCTCTATGGAGCAAGTGGTGGAATTTCTTCTTCACATGGACAAGCC TATTCCTGATCTTCCGAGAACTCGCCCTGTTACCTTGTTTCCTTACAATAGTGCCAACACTGGACTTTGCAACACATACT CTTGCACTTTCAAGTGA
Protein sequence (LotjaGi1g1v0127400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIVQDEFTVGRSGPWLGMLNDACENAYKAVAVEFDTRMSPEFGDPNDNHVGVNLGSIISTKIINVSEFGVSLKDGFVHHA WISYDGPQRRMEIHLGLPNQELKPSKPIFSETLDLSPYLNEYMFVGFSASTGNHTQIHNILSWNFTSTSQAVLHFPSSET CQGKIMLENTTETTATKKSSKNEIPRSFLIFMAAVASAVVVLIGFYFISKLRRNAAKSNTSIEAAIHRPRPPNKPRRFTF SQLSSSTRSYSEIELLGSDSRGVYYRGKLPNGSQVAVKRFSTQFLNTHGSDRRRLLKEIKAISHARHPNLLPVRGWCQDN NEIMVVYDFVPNGSLDKWLFGAGVLPWTRRFKVVKDVADGLSFLHAKQLAHKNLKCSSVFLDVSFRSVLGDFGFVLVGAE SKQFEAIVSLGADVFEFGVLVLEVVAGRPRVEIDEGKPEEKNLLDFAWNLHETNEKVKLVDRRMGSLINLEHAIRVLEIG LLCTLNENKGRPSMEQVVEFLLHMDKPIPDLPRTRPVTLFPYNSANTGLCNTYSCTFK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 159 | 159 | 2.9E-44 | – | |
| Phobius | 1 | 187 | 187 | - | – | |
| PANTHER | 1 | 536 | 536 | 3.4E-267 | – | |
| PANTHER | 1 | 536 | 536 | 3.4E-267 | – | |
| SUPERFAMILY | 2 | 149 | 148 | 8.98E-40 | ||
| Pfam | 7 | 151 | 145 | 8.5E-38 | ||
| CDD | 12 | 148 | 137 | 2.26138E-54 | ||
| ProSitePatterns | 30 | 36 | 7 | - | ||
| TMHMM | 187 | 209 | 23 | - | – | |
| Phobius | 188 | 208 | 21 | - | – | |
| Gene3D | 208 | 329 | 122 | 1.0E-20 | – | |
| Phobius | 209 | 538 | 330 | - | – | |
| SUPERFAMILY | 229 | 503 | 275 | 7.86E-47 | ||
| ProSiteProfiles | 250 | 501 | 252 | 20.612 | ||
| Pfam | 254 | 395 | 142 | 2.7E-19 | ||
| Gene3D | 330 | 508 | 179 | 4.2E-26 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
| Molecular function | Carbohydrate binding | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates. |
Expression pattern of LotjaGi1g1v0127400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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