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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR019825
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We have found 50 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.089s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0088019.1
n.a. Lectin receptor-like kinase Tg-20 [Medicago truncatula] gi|357517167|ref|XP_003628872.1| chr0 35898490 35900862 -
2 domain predictions
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Lj0g3v0112109.1
n.a. Chain A, Lotus Tetragonolobus Seed Lectin (Isoform)gi|169404520|pdb|2EIG|B Chain B, Lotus Tetragonolobus Seed Lectin (Isoform)gi|169404521|pdb|2EIG|C Chain C, Lotus Tetragonolobus Seed Lectin (Isoform)gi|169404522|pdb|2EIG|D Chain D, Lotus Tetragonolobus Seed Lectin (Isoform)] gi|169404519|pdb|2EIG|A chr0 48759957 48760857 +
2 domain predictions
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Lj0g3v0134279.1
n.a. lectin [Robinia pseudoacacia] gi|4115547|dbj|BAA36415.1| chr0 61509135 61510872 +
2 domain predictions
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Lj0g3v0254769.1
n.a. lectin [Robinia pseudoacacia] gi|606720|gb|AAA80183.1| chr0 132291627 132292250 +
2 domain predictions
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Lj0g3v0254789.1
n.a. lectin-related polypeptide [Robinia pseudoacacia] gi|4115549|dbj|BAA36416.1| chr0 132296341 132297033 +
2 domain predictions
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Lj0g3v0298529.1
n.a. Chain A, Lotus Tetragonolobus Seed Lectin (Isoform)gi|169404520|pdb|2EIG|B Chain B, Lotus Tetragonolobus Seed Lectin (Isoform)gi|169404521|pdb|2EIG|C Chain C, Lotus Tetragonolobus Seed Lectin (Isoform)gi|169404522|pdb|2EIG|D Chain D, Lotus Tetragonolobus Seed Lectin (Isoform)] gi|169404519|pdb|2EIG|A chr0 155129678 155131217 +
2 domain predictions
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Lj0g3v0304439.1
n.a. RecName: Full=Seed lectin; AltName: Full=LECSJASG; Flags: Precursorgi|1755064|gb|AAB51441.1| lectin precursor [Sophora japonica] gi|3122340|sp|P93535.1|LECS_SOPJA chr0 158574399 158575780 -
2 domain predictions
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Lj0g3v0310929.1
n.a. n.a. chr0 162403467 162406443 +
2 domain predictions
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Lj0g3v0310949.1
n.a. PREDICTED: L-type lectin-domain containing receptor kinase S.4-like [Glycine max] gi|356496074|ref|XP_003516895.1| chr0 162403467 162406700 -
2 domain predictions
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Lj1g3v1814290.1
n.a. lectin protein, partial [Sophora japonica] gi|431837890|gb|AGA94529.1| chr1 21985713 21986788 +
2 domain predictions
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Lj1g3v2372440.1
n.a. PREDICTED: lectin-domain containing receptor kinase VI.3-like [Glycine max] gi|356566703|ref|XP_003551569.1| chr1 27925423 27927990 -
2 domain predictions
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Lj1g3v2372440.2
n.a. PREDICTED: lectin-domain containing receptor kinase VI.3-like [Glycine max] gi|356566703|ref|XP_003551569.1| chr1 27925423 27927990 -
2 domain predictions
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Lj1g3v5010640.1
n.a. PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Glycine max] gi|356546735|ref|XP_003541778.1| chr1 60901967 60904367 +
2 domain predictions
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Lj2g3v1467770.1
n.a. PREDICTED: agglutinin-2-like [Cicer arietinum] gi|502154472|ref|XP_004509711.1| chr2 23165539 23166345 -
2 domain predictions
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Lj2g3v1467800.1
n.a. PREDICTED: agglutinin-2-like [Cicer arietinum] gi|502154472|ref|XP_004509711.1| chr2 23171094 23171894 -
2 domain predictions
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Lj2g3v1573030.1
n.a. PREDICTED: probable L-type lectin-domain containing receptor kinase S.5-like [Cicer arietinum] gi|502161839|ref|XP_004512301.1| chr2 25004192 25008111 -
2 domain predictions
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Lj2g3v2196570.1
n.a. PREDICTED: probable L-type lectin-domain containing receptor kinase S.7-like [Glycine max] gi|356551830|ref|XP_003544276.1| chr2 32830957 32833849 -
2 domain predictions
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Lj2g3v2196580.1
n.a. PREDICTED: probable L-type lectin-domain containing receptor kinase S.7-like [Glycine max] gi|356551830|ref|XP_003544276.1| chr2 32831163 32834338 -
2 domain predictions
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Lj3g3v0339020.1
n.a. lectin protein, partial [Sophora japonica] gi|431837890|gb|AGA94529.1| chr3 2732301 2733704 -
2 domain predictions
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Lj3g3v2809410.1
n.a. PREDICTED: probable L-type lectin-domain containing receptor kinase VII.2-like [Glycine max] gi|356547003|ref|XP_003541908.1| chr3 34518533 34520736 -
2 domain predictions
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Lj4g3v0398310.1
n.a. Lectin receptor-like kinase Tg-20 [Medicago truncatula] gi|357476163|ref|XP_003608367.1| chr4 5124004 5126534 -
2 domain predictions
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Lj4g3v0408350.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357476151|ref|XP_003608361.1| chr4 5136049 5138256 -
2 domain predictions
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Lj4g3v0408400.1
n.a. Receptor-like protein kinase [Medicago truncatula] gi|357476149|ref|XP_003608360.1| chr4 5147425 5148161 -
2 domain predictions
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Lj5g3v0510930.1
n.a. PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Cicer arietinum] gi|502125091|ref|XP_004498794.1| chr5 5342746 5345213 +
2 domain predictions
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Lj5g3v1726050.1
n.a. Chain A, Lotus Tetragonolobus Seed Lectin (Isoform)gi|169404520|pdb|2EIG|B Chain B, Lotus Tetragonolobus Seed Lectin (Isoform)gi|169404521|pdb|2EIG|C Chain C, Lotus Tetragonolobus Seed Lectin (Isoform)gi|169404522|pdb|2EIG|D Chain D, Lotus Tetragonolobus Seed Lectin (Isoform)] gi|169404519|pdb|2EIG|A chr5 24902886 24903611 -
2 domain predictions
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Lj6g3v0393240.1
n.a. PREDICTED: L-type lectin-domain containing receptor kinase VIII.1-like [Glycine max] gi|356537842|ref|XP_003537433.1| chr6 3628195 3630683 -
2 domain predictions
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LotjaGi1g1v0127400.1
n.a. Receptor-like kinase; TAIR: AT3G55550.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|Q9M2S4|LRKS4_ARATH L-type lectin-domain containing receptor kinase S.4; TrEMBL-Plants: tr|A0A0L9V011|A0A0L9V011_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0127400 LjG1.1_chr1 20365274 20368771 +
2 domain predictions
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LotjaGi1g1v0376900.1
n.a. Lectin; TAIR: AT5G65600.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|P93535|LECS_STYJP Seed lectin; TrEMBL-Plants: tr|I3SRF2|I3SRF2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0376900 LjG1.1_chr1 85626144 85628827 +
2 domain predictions
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LotjaGi1g1v0377000.1
n.a. Lectin; TAIR: AT5G10530.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|Q39527|LECR_CLAKE Lectin-related protein; TrEMBL-Plants: tr|I3SCP3|I3SCP3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0377000 LjG1.1_chr1 85640332 85642491 +
2 domain predictions
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LotjaGi1g1v0377100.1
n.a. Lectin; TAIR: AT5G10530.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|Q41161|LCS2_ROBPS Seed agglutinin 2; TrEMBL-Plants: tr|L0H879|L0H879_STYJP Lectin protein; Found in the gene: LotjaGi1g1v0377100 LjG1.1_chr1 85673389 85674495 +
2 domain predictions
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LotjaGi1g1v0444700.1
n.a. Receptor-like protein kinase; TAIR: AT5G01550.1 lectin receptor kinase a4.1; Swiss-Prot: sp|Q9M020|LRK63_ARATH Lectin-domain containing receptor kinase VI.3; TrEMBL-Plants: tr|A0A0B2S8Y5|A0A0B2S8Y5_GLYSO Lectin-domain containing receptor kinase VI.3; Found in the gene: LotjaGi1g1v0444700 LjG1.1_chr1 94233064 94235511 -
2 domain predictions
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LotjaGi1g1v0785300.1
n.a. Lectin receptor kinase; TAIR: AT5G10530.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|Q9LXA5|LRK91_ARATH L-type lectin-domain containing receptor kinase IX.1; TrEMBL-Plants: tr|I1M2L5|I1M2L5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0785300 LjG1.1_chr1 135792583 135795019 +
2 domain predictions
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LotjaGi2g1v0157700_LC.2
n.a. Lectin; TAIR: AT5G10530.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|P19664|LEC_LOTTE Anti-H(O) lectin; TrEMBL-Plants: tr|D0VWW1|D0VWW1_LOTTE Lectin; Found in the gene: LotjaGi2g1v0157700_LC LjG1.1_chr2 55730085 55735505 -
2 domain predictions
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LotjaGi2g1v0157900.1
n.a. Lectin; TAIR: AT5G10530.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|P19664|LEC_LOTTE Anti-H(O) lectin; TrEMBL-Plants: tr|I3SL71|I3SL71_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0157900 LjG1.1_chr2 55778724 55781154 -
2 domain predictions
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LotjaGi2g1v0158100.1
n.a. Lectin; TAIR: AT5G10530.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|P19664|LEC_LOTTE Anti-H(O) lectin; TrEMBL-Plants: tr|D0VWW1|D0VWW1_LOTTE Lectin; Found in the gene: LotjaGi2g1v0158100 LjG1.1_chr2 55792648 55794278 -
2 domain predictions
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LotjaGi2g1v0329800.1
n.a. Lectin-like protein; TAIR: AT5G10530.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|Q39529|LEC2_CLAKE Agglutinin-2; TrEMBL-Plants: tr|K7L993|K7L993_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0329800 LjG1.1_chr2 80525082 80526008 -
2 domain predictions
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LotjaGi2g1v0329900_LC.1
n.a. Lectin; TAIR: AT5G10530.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|Q39529|LEC2_CLAKE Agglutinin-2; TrEMBL-Plants: tr|K7LF03|K7LF03_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0329900_LC LjG1.1_chr2 80543856 80544820 -
2 domain predictions
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LotjaGi2g1v0330000.1
n.a. Lectin-like protein; TAIR: AT5G10530.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|Q39529|LEC2_CLAKE Agglutinin-2; TrEMBL-Plants: tr|K7K1C5|K7K1C5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0330000 LjG1.1_chr2 80546716 80547704 -
2 domain predictions
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LotjaGi2g1v0351500.1
n.a. Receptor-like kinase; TAIR: AT5G06740.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|Q9FG33|LRKS5_ARATH Probable L-type lectin-domain containing receptor kinase S.5; TrEMBL-Plants: tr|G7K2N4|G7K2N4_MEDTR Lectin receptor kinase; Found in the gene: LotjaGi2g1v0351500 LjG1.1_chr2 82778318 82786760 -
2 domain predictions
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LotjaGi3g1v0029600.1
n.a. Lectin protein; TAIR: AT5G10530.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|Q41161|LCS2_ROBPS Seed agglutinin 2; TrEMBL-Plants: tr|L0H879|L0H879_STYJP Lectin protein; Found in the gene: LotjaGi3g1v0029600 LjG1.1_chr3 3232806 3234334 -
2 domain predictions
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LotjaGi3g1v0230100.1
n.a. Lectin receptor kinase; TAIR: AT3G55550.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|Q9M2S4|LRKS4_ARATH L-type lectin-domain containing receptor kinase S.4; TrEMBL-Plants: tr|V7AKE3|V7AKE3_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0230100 LjG1.1_chr3 35961739 35966068 +
2 domain predictions
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LotjaGi3g1v0445100.1
n.a. Lectin receptor kinase; TAIR: AT4G28350.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|O49445|LRK72_ARATH Probable L-type lectin-domain containing receptor kinase VII.2; TrEMBL-Plants: tr|I1LUH3|I1LUH3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0445100 LjG1.1_chr3 85834628 85846817 -
2 domain predictions
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LotjaGi4g1v0041100.1
n.a. Lectin receptor kinase; TAIR: AT5G10530.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|Q9LXA5|LRK91_ARATH L-type lectin-domain containing receptor kinase IX.1; TrEMBL-Plants: tr|G7JU30|G7JU30_MEDTR Lectin receptor kinase; Found in the gene: LotjaGi4g1v0041100 LjG1.1_chr4 4842840 4846774 -
2 domain predictions
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LotjaGi4g1v0041500.1
n.a. Lectin receptor kinase; TAIR: AT5G10530.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|Q9LXA5|LRK91_ARATH L-type lectin-domain containing receptor kinase IX.1; TrEMBL-Plants: tr|G7JU23|G7JU23_MEDTR L-type lectin-domain receptor kinase; Found in the gene: LotjaGi4g1v0041500 LjG1.1_chr4 4865916 4867928 -
2 domain predictions
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LotjaGi4g1v0172700.1
n.a. Lectin receptor kinase; TAIR: AT5G10530.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|Q9LXA5|LRK91_ARATH L-type lectin-domain containing receptor kinase IX.1; TrEMBL-Plants: tr|G7LII2|G7LII2_MEDTR Lectin receptor kinase; Found in the gene: LotjaGi4g1v0172700 LjG1.1_chr4 34329295 34331769 +
2 domain predictions
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LotjaGi5g1v0054000.1
n.a. Lectin receptor kinase; TAIR: AT5G10530.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|Q9LXA5|LRK91_ARATH L-type lectin-domain containing receptor kinase IX.1; TrEMBL-Plants: tr|I1MX00|I1MX00_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0054000 LjG1.1_chr5 9193255 9195891 +
2 domain predictions
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LotjaGi5g1v0257800.1
n.a. Lectin; TAIR: AT5G10530.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|Q41160|LCB3_ROBPS Putative bark agglutinin LECRPA3; TrEMBL-Plants: tr|I3SL71|I3SL71_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0257800 LjG1.1_chr5 56646812 56649422 +
2 domain predictions
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LotjaGi5g1v0257900.1
n.a. Lectin; TAIR: AT5G10530.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|Q41160|LCB3_ROBPS Putative bark agglutinin LECRPA3; TrEMBL-Plants: tr|I3SK58|I3SK58_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0257900 LjG1.1_chr5 56652168 56653170 +
2 domain predictions
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LotjaGi5g1v0266100.1
n.a. Lectin; TAIR: AT5G10530.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|P19664|LEC_LOTTE Anti-H(O) lectin; TrEMBL-Plants: tr|D0VWW1|D0VWW1_LOTTE Lectin; Found in the gene: LotjaGi5g1v0266100 LjG1.1_chr5 57781869 57783520 +
2 domain predictions
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LotjaGi6g1v0052800.1
n.a. Receptor-like kinase; TAIR: AT3G53380.1 Concanavalin A-like lectin protein kinase family protein; Swiss-Prot: sp|Q9LFH9|LRK81_ARATH L-type lectin-domain containing receptor kinase VIII.1; TrEMBL-Plants: tr|A0A0S3S5S3|A0A0S3S5S3_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0052800 LjG1.1_chr6 9428809 9431404 -
2 domain predictions
 –