Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi1g1v0129600.1

Overview

Field Value
Gene ID LotjaGi1g1v0129600
Transcript ID LotjaGi1g1v0129600.1
Lotus japonicus genome version Gifu v1.2
Description Receptor-like protein kinase; TAIR: AT4G21410.3 cysteine-rich RLK (RECEPTOR-like protein kinase) 29; Swiss-Prot: sp|Q8S9L6|CRK29_ARATH Cysteine-rich receptor-like protein kinase 29; TrEMBL-Plants: tr|G7KDB1|G7KDB1_MEDTR Cysteine-rich receptor-kinase-like protein; Found in the gene: LotjaGi1g1v0129600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:20774417..20781709) extracted from Lotus japonicus Gifu genome v1.2.

GCGGCCCTAAAAATGGTAATCAAAACTACATGAAGGAAAAGGTAATAAGTTGACTTCAACTAGTCTTGGTCATCATTCAA GTGGACAACACCCCCATTTAGCAATACATAGAATCTCTTCATTCATATTCAATCCTTCGTTTGTTGAGAGGACAATTACA TTCACAATGGTAGTTCTTCCTAGTAGGTTCCTTTGCTTTCAAAGCTTTCTCCTTCTCATGATAATGGTGTCTGATCAAGC CAGAGCCCAACCAAACTTCACTGCTTTTTGCATGAAAGACCAAGGCAACTACACCCTCAACAGCACCTACCACAACAACC TCAACACCCTCCTCTCCAATCTCCTTTCCAACACAGAAATCAACTATGGTTTCTACAATTCCTCCTATGGCCAAGGCATT GAAAAAGTTTCAGCCATAGCACTCTGTAGAGGAGACCTCAAACGTGACGAATGCCTCACCTGCCTCAACAACTCAAGGTT CAACCTCACACTGCATTGTCCCAACCAAAAAGAGGCAATTGGGTATATTGAAAGGTGCATGCTGAGGTACTCCAACAGGC AAATTTTTGGTGAGATGGAGAAGACTCCTACGATTCGCATGAGGAACTTCCGCAACAATGTGATAGATGTGGATGCGTTC AACAAGGTTCTGGGGAGCTTGTTGAACAGCCTGAAAATCAGGGCTGTGTCAGGGGACTCGCGCTTAAAGTACGCTACCGG AAACGTTTCTAGTCCAAATCTTCCAGACTTGTATGGCCTGGTGCAGTGCACGCCTGATCTTTCGAGCCAACAATGTGATT CGTGCTTGATCGGGGCTATTGGAGAGATACCATCATGTTGTGAAAGGAAGCTAGGTGGTAGAGTTATTAGACCAAGTTGT AATATGAGATATGAAGGCAGCCTCTTCTATGAGTATCAACCACCACCATCCTCACCACCACCACCAATTTCAACTTCCAA TAATCAGACTTCATCCGAAGGTACTATATATATTTATCACATTGAAGATAACACTAAAATGCAAGAATTGAAGTATGCTT CAAGTTTTGAATTCAGAGTGTTTTCTCTGTTTTCTTTTGGAGCCAACTTAGATACTAAGTGGTTATTATTAGAAATATTG ATTTATTAGTTAATTTCCTACTTAGGTGATTAGTTAGTTAGTGAGCTAGTTATTAGGTAGTTACTTTGCTCTATGCTAAC TCTTGTATCAGTACTTTGATTCTTCTGGTACTCTTGTTTCGGACCATGTGAAGGGAATTTACATTCCTTTTAGTTATTGA CATTAGCACTTAATTAAATTGTGTATGTTTGTGGGTTTATGTGGTTAATTACACAATATTCATTTTCATAAGAGTATATG TTGATGCATCAATCTTCCATTTTTAGTTTGTATACAAATAGGCTTTTATATTATGGACAATCCCACCAAGGATTTCTGAT TTGTACAGGGAAGAGTAACACATCTAAAATTGCCATAGCCATAGCAGTTCCAGTTGTATTGGTTGCATTGGTGCTCATTT CTATCTGCATCTATTCACGAGTGAAGAAGCCAAGTGAAAATTTTGAAAGTAAGTCCATGTTCAATATTGATTGTACTTAT CATATCTGAAAAGGACATTTCCTTTGTCTAACTCAATTTCCCATTACCTTCAAAAGGTGATGATTATGATGATGAAATTG AAACCAATGAGTCACTGCACTTCAACTTTGACACCATACGAGTTGCTACAAATGATTTTTCTGATTCTAATAAGATTGGA GAAGGTGGATTTGGTGCTGTTTACTCGGTAAGATAACATTGTTTCATCAAAACATTGCATAACATGCATGGCTGAGGAAG AACTTGTTGAGCATAATATATTGGTATATATTTTCAGGGTAAGCTAACCAATGGACAAGATATTGCTGTCAAAAGATTGT CAATGAATTCTGGCCAAGGAGATATGGAATTTAAGAATGAAGTGCTTCTAGTGGCCAAGCTTCAACATAGAAATTTAGTT AGGCTACTTGGTTTCAGTTTGAAAGGGAGAGAAAGGCTCCTTATCTATGAATTTGTTCCAAATAAAAGTCTTGACTACAT CATATTTGGTAAGCTAAAAACATTGCATTATTATCCTGTTGTTTTGTTACTTCAAGTAGAGAAGCTCCAATAAGTGATTC CAGCTTGTAACCGAACAATGACTAACTGGCTACTAACATAGCTTTAAAATTAATACAGATCCAACCAGGAAAGCGCAATT GGATTGGGAAATGCGCCACAAAATCATACATGGTATTGCTCGAGGCCTTCTTTACCTTCATGAGGATTCGCGATTGCGCA TTATACATCGCGATCTCAAAGCAAGCAATATTCTCCTAGACGACGAGCTGAATGCTAAGATAGCAGATTTTGGCATGGCA AGACTGATTGTTGTGGACCAAACACAAGAAAATACAAATAGAATTGTTGGAACCTAGTAAGTACTAGAATATGTGCCTAC CATTGTCATAAAAGCTAAATTTGAATCAACTAACAACTAATATTTGCTCTTACATTATCATTCAGTCATGATAAATAATT TTGTTAACTAAGAGAATTGGATGGACTGCATCCAAACTCTGTAACTAGTTGTTATAAGTGTCAAGCTCATTCAAAAAGAT CGAATAGCAACAATTACTTCTTCACCAACACAAAATCAGATATTGACAAAATGTAACCTTTAAAAGAGTCAAAGCATTTT TACTAATTAAGTTTGTTCATGTTGGCATGCAGTGGATATATGGCACCTGAGTATCTAATGTATGGACAATTTTCAGTAAA ATCAGATGTCTTCAGTTTTGGTGTACTAGTTCTTGAGATTATTAGTGGCCAAAAAAACAGTGGCGTTCGTCATGGGGAGA ATGTGGAAGATCTGCTGAGTTTTGTAAGTCTTCCTTTACATGAGAAATTGTATACAAGAGAAACTGAGTTTGTTTGTCTC TACTTATTTTGTGAAATTAAAACTTATTTAATCATTTATATATTATATGTTTGGGTATACTGTTGACAAAATTTTCTAAT TTCAGTAGACATATAGACATAGTTTGTCCCATACCCAGCTTCTATTGTGACTGTTGTTTCTTTCTTGCTGATGAAATGGA ACTGGTAGCCTCGTCTTATGGTTATCTATAACTAAGCAAATTCTTGCAGGCATGGAGAAACTGGAGGGAGGGGACACCTG CAAATATTATAGATCCGACATTAAACAACGGTTCACGAAATCAAATGATAAGATGTATTCACATTGGTTTACTTTGTGTT CAAGAAAACATCGCTAACAGACCACCTATGGCTACCATTGCACTCATGCTTAGCAGCTATTCTCTCAATCTTCCTGTGCC TTCAGAACCTGGATTTTTCATGGGTAGAACTAGAAGCCTCGAAGAGAATTCAGGGGAAACAAGATCAAGTGAATCCATCA ATAGATTACCTCAAGAATCAATAAATGAGGTTTCAATTACAGAGCTATACCCTCGTTAATTAGATTCTGGTCATTGGGGT GATGATAGTATTCACTTATATCATCAATGTTTCAACCAAAATAGAATGTCTTTTGATTTGGCCGGGCAAAGACTCAGTTA ATGGATCTGATTCAGTTGTTTGTTTAAAGTGAATTAGAAACTGTAATATAACATTCAATTTGATTTTGAAGTTTATGGTT TGGCTTTTAAGCCATGAGTGCCACTTGGTGCTCTTTCCACACTAGAGTATTCCGTTGGTGGTGTAAGAAATCTGGTATCT TATTGCATTTGTTTAATGTAAACAAGCTCAAAACTACCGTTTGTTTACTGGAGTTGAAACCATCTTTCTCAGACCCTTTT AGATGGCTAAACAACACTATTGTCCATTTTCATTGTAAATAGAAATTTATTCCTCCAGAACTTATATAGTCGATGGTTGG TGGAAAATATTGATATTAAGGGGGGGAAAACATTTCATGGAGTTTGATGGTTACCAGAAAAATCATCACGGTCTGGCATC AAATGCCATTCATCTGTTATCACCATGCCTTTTTATCCTTAATCCTTTGGAACAAGGACAAGGCCATGAAGTACTACAAA GCTATCTCACAACGGTTTCAAGATTCACCAGAACCCTTATGCCCATACCTACAGCTATCAAAGAATCAGATCTAGACTCG ATCTCTGCAGTGGAGCACAACCTAAGACTTGGAGGTTCTCCTTGGTCTCTAGAGTGGAGCACAACGGTCTTAGGTGCACG ATGAAGCTATTGGACCATGGCAAGGGTACTAGCAAAAGATACTCAGACGCTCAAGTCCAAAGGAAGCCTTTATAGAAGGG CTTCCGAGGGCAAGGTTGACTCTCATTGGTCATGCGCCCGCTCAAACACTAGACAAGCCAAGACAGGATATTCATTCATA AGTCATTCAAGCTTCCCTTATGACACATGCTTATGTGCAAGTTCTTTGAGTTGGCTAAGATGTTATTTGACTTCAATTTC GTAACCGGACAAAAAAGTTTCCAAAGTTCCCAAACTCAACCAAATCAGTACTTAAAAAAGATTGTGTATCCGAAGTTCCC AAACTCAACCAAACCAATCAACAAACAACCATACTTAAAAAGGAGATTGTGTACATGAGTACAGTCGAGATATATGGTAA AAAAGAAAATCACAGTGAAACTAAAATTATGGTAGCCAAAAGCAACTTTTTTTTTCACATGTTTGTCTAAATATCTTCTG AATTTGCATGAGATTAAAGTTATGTTCAAACTATATCCGATGCTGTTGTGGTTCTAATTGGCAAAGTGACTAATTAAAAT TCTACTTTTATTGATTACTGTTGAGGCAATAGCAGAGACATCGAGTAAACTACATTCAAACGAGTTCACCATATAGTGAG CAGACAAAACCTAATCAATGATCTGTAAATGCATACCACTTTATCTAGCAAGAATGCAAGATAGCAAAAGCAGTAGAAAA CTGTGACCGAATATTAGCTGAACAGCAATAGAATATCAAATGCTAAAGAGGAGAAACGGAAATTAGGTCCTTAACAAAAT ATAACACTAGATATCCAGGGTGGTTCGCAAAACCAAAAAGTAGACTCCATTAAGTTTAATATGTTCGGACAAAACAACAT CCAAATTCATTCTTACGAAACTATGATACTTCAAAACAGGCAGGTCTAGGCAGTTGCACTGGCAGCATCAATAAAGGCTC TTCCAGGTTGGCGGTTAGCCAATGGTCCATGGCATCCAAGAAGCTGCAAAACAGCAAGAAAATAATATAAGAGTCCAATC TTATCAATGAGTAGATAAGTGAAGAACTAAATGAATACACATGGAGTACTTCATTCTCAGATCAGAAAAAGCTCCAGATA TTACCATGATCCAAGTTTAGAATAATGTCCTCAACTATATGCAAATAAGTTACAATTACAGAATATTGCATTCACATTAC CTTTGCATTCACACCATCAGGCAAAATCCTGTTCTCTGATTTGTACCTCAGATAATCAGCACGAGAAAACTTGGTAAATC CCCTGAAAGTATATAAAACAATAATTAATAATTAGTGTTAAGTCATTACATACAATTACATGAAGCAAATCTACAATGGA TGTAAGGTATTATTCATCCTTCAAATCGGGGTGATGAGGAAAAGTAACCAGCCATGTTCAGGTGCCTAGGTGGCTTCCAA TTTAGAACAAATACATACCACTTCCTGCTGACAATGATCTTTTGACGACCAGGGAACTTGAACTTAGCACGGCGTAGGGC CTCCTGGGCATGATGGCTGTTACTGTCCTTGCAGCGGACTGAAAGAAGAACCTGCCCAATAGCAACCCTAGCACAGGTAC CCTGTGGCTTTCCAAAAGCACCTCTCATGCCAGTCTGAAGCCTATCAGCTCCAGCACATGAAAGCATCTTGTTGATCCGA AGGACATGGAATGGGTGGACCCTAACCCTCAAGTGGAAAGCGTCCTTGCCAGCAAACTTAGCCATGTACTTGTTGCAAGC AATCCTAGCAGCCTCAAGTGCCTCACTTGAGACATTTTCCTTCTCCCAACTAACCAGATGGACACAGAAAGGAAATTCAT CAACACCCTTCTTCTTCATACCAACATCATAGATCCTGATCTTGGGATCAGGAACACCACGACAGAAACGTGACTTAGGG TACGGCTTGTTTTTAATTTGGCGATAGCACCTTGCGGGTCCTGAATCACACAAAAGTTACAATTACCATCAGCACAATTG AAAGACAAAGAAACAAATGAAATCAATCTAAAACAATTTTCCAGAATTACAGGAAACAAAAAACTAAACATGAAATATTG ATAGTAATATACCAAAAAGTTCACAACATAAAACTTAAAGATAAGCACAAGTGATTGACAAACAAAAAAAGCCACTGCAT CAGAGAATCACAAGAGATTTCAAAGAATATGTAAAGCTCTGAAGACCCATTGAGTTCATGAAACCATCTATTAAGCAACC TTACAATCCAGACATCCCAATAATAATAAAAGATCCTTGTCCACCAATCTGAATAAATCTCAGGCTGAGCTAACAAAGAA ATAATGACTACAGCAAAAAAAACAAAGAATACAGCTCTAGTAAAAGATTATTCAAAACATCAAATAGTTTAAATCTGAAG TAATTTCTAAGCTTGATCAAATAAAAAATGGGTATAATCCCAGTTCATACAAGGTCTAAGAATCCAACAAGTATTCAATA CAAAATCATATCAACTTCTTTAAAACAAGATATAATAAACACATATTCCAACAAAACCCTTTGAGAATCAAATCCAAGGT AACACCAATCTCAAAGCTAATTCAATCAGCTATTACATCCATTTTGCAGCAACAACAAACCAACATGTAAAATACATCAA GTTTCAGCATAACCAATTCTCAACAAGCGAATAATAAAACCTAATCTTAGCATAAACAAGCTAAAATGGGTTCAATTGAA AACCGATCAAGAGAATCACGAAGTCATGTATAGCAGAAATGACGGTGGAAAAGAGATAGGGGTTGAGTGCTTACTCCTTC CCATGGCAGCGGCGCGGTCTCTCTCAGCTGCGCGTTGGGGATTGAATCTGTGGATGGAAGAAGAACGAAACCCTAGCAAT GCAGAACATTATATAGAGGCCGCAGCAGCAGTTTAGGGCTAAAGAGACGGGCTTTTGTTTTGGGCCCAATCCCCACATCT CTTGTTTGAAGATTTCTTCCTAGGGTGCTTGAATTGGACAAGATTTTTATGAAGAAAAATAACATAACGGGTAATTTTAG TTTCGCTGAGACT 

CDS sequence (LotjaGi1g1v0129600.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGTAGTTCTTCCTAGTAGGTTCCTTTGCTTTCAAAGCTTTCTCCTTCTCATGATAATGGTGTCTGATCAAGCCAGAGC CCAACCAAACTTCACTGCTTTTTGCATGAAAGACCAAGGCAACTACACCCTCAACAGCACCTACCACAACAACCTCAACA CCCTCCTCTCCAATCTCCTTTCCAACACAGAAATCAACTATGGTTTCTACAATTCCTCCTATGGCCAAGGCATTGAAAAA GTTTCAGCCATAGCACTCTGTAGAGGAGACCTCAAACGTGACGAATGCCTCACCTGCCTCAACAACTCAAGGTTCAACCT CACACTGCATTGTCCCAACCAAAAAGAGGCAATTGGGTATATTGAAAGGTGCATGCTGAGGTACTCCAACAGGCAAATTT TTGGTGAGATGGAGAAGACTCCTACGATTCGCATGAGGAACTTCCGCAACAATGTGATAGATGTGGATGCGTTCAACAAG GTTCTGGGGAGCTTGTTGAACAGCCTGAAAATCAGGGCTGTGTCAGGGGACTCGCGCTTAAAGTACGCTACCGGAAACGT TTCTAGTCCAAATCTTCCAGACTTGTATGGCCTGGTGCAGTGCACGCCTGATCTTTCGAGCCAACAATGTGATTCGTGCT TGATCGGGGCTATTGGAGAGATACCATCATGTTGTGAAAGGAAGCTAGGTGGTAGAGTTATTAGACCAAGTTGTAATATG AGATATGAAGGCAGCCTCTTCTATGAGTATCAACCACCACCATCCTCACCACCACCACCAATTTCAACTTCCAATAATCA GACTTCATCCGAAGGGAAGAGTAACACATCTAAAATTGCCATAGCCATAGCAGTTCCAGTTGTATTGGTTGCATTGGTGC TCATTTCTATCTGCATCTATTCACGAGTGAAGAAGCCAAGTGAAAATTTTGAAAGTGATGATTATGATGATGAAATTGAA ACCAATGAGTCACTGCACTTCAACTTTGACACCATACGAGTTGCTACAAATGATTTTTCTGATTCTAATAAGATTGGAGA AGGTGGATTTGGTGCTGTTTACTCGGGTAAGCTAACCAATGGACAAGATATTGCTGTCAAAAGATTGTCAATGAATTCTG GCCAAGGAGATATGGAATTTAAGAATGAAGTGCTTCTAGTGGCCAAGCTTCAACATAGAAATTTAGTTAGGCTACTTGGT TTCAGTTTGAAAGGGAGAGAAAGGCTCCTTATCTATGAATTTGTTCCAAATAAAAGTCTTGACTACATCATATTTGATCC AACCAGGAAAGCGCAATTGGATTGGGAAATGCGCCACAAAATCATACATGGTATTGCTCGAGGCCTTCTTTACCTTCATG AGGATTCGCGATTGCGCATTATACATCGCGATCTCAAAGCAAGCAATATTCTCCTAGACGACGAGCTGAATGCTAAGATA GCAGATTTTGGCATGGCAAGACTGATTGTTGTGGACCAAACACAAGAAAATACAAATAGAATTGTTGGAACCTATGGATA TATGGCACCTGAGTATCTAATGTATGGACAATTTTCAGTAAAATCAGATGTCTTCAGTTTTGGTGTACTAGTTCTTGAGA TTATTAGTGGCCAAAAAAACAGTGGCGTTCGTCATGGGGAGAATGTGGAAGATCTGCTGAGTTTTGCATGGAGAAACTGG AGGGAGGGGACACCTGCAAATATTATAGATCCGACATTAAACAACGGTTCACGAAATCAAATGATAAGATGTATTCACAT TGGTTTACTTTGTGTTCAAGAAAACATCGCTAACAGACCACCTATGGCTACCATTGCACTCATGCTTAGCAGCTATTCTC TCAATCTTCCTGTGCCTTCAGAACCTGGATTTTTCATGGGTAGAACTAGAAGCCTCGAAGAGAATTCAGGGGAAACAAGA TCAAGTGAATCCATCAATAGATTACCTCAAGAATCAATAAATGAGGTTTCAATTACAGAGCTATACCCTCGTTAA 

Protein sequence (LotjaGi1g1v0129600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MVVLPSRFLCFQSFLLLMIMVSDQARAQPNFTAFCMKDQGNYTLNSTYHNNLNTLLSNLLSNTEINYGFYNSSYGQGIEK VSAIALCRGDLKRDECLTCLNNSRFNLTLHCPNQKEAIGYIERCMLRYSNRQIFGEMEKTPTIRMRNFRNNVIDVDAFNK VLGSLLNSLKIRAVSGDSRLKYATGNVSSPNLPDLYGLVQCTPDLSSQQCDSCLIGAIGEIPSCCERKLGGRVIRPSCNM RYEGSLFYEYQPPPSSPPPPISTSNNQTSSEGKSNTSKIAIAIAVPVVLVALVLISICIYSRVKKPSENFESDDYDDEIE TNESLHFNFDTIRVATNDFSDSNKIGEGGFGAVYSGKLTNGQDIAVKRLSMNSGQGDMEFKNEVLLVAKLQHRNLVRLLG FSLKGRERLLIYEFVPNKSLDYIIFDPTRKAQLDWEMRHKIIHGIARGLLYLHEDSRLRIIHRDLKASNILLDDELNAKI ADFGMARLIVVDQTQENTNRIVGTYGYMAPEYLMYGQFSVKSDVFSFGVLVLEIISGQKNSGVRHGENVEDLLSFAWRNW REGTPANIIDPTLNNGSRNQMIRCIHIGLLCVQENIANRPPMATIALMLSSYSLNLPVPSEPGFFMGRTRSLEENSGETR SSESINRLPQESINEVSITELYPR 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SignalP_GRAM_POSITIVE 1 27 27 -
Phobius 1 27 27 -
SignalP_GRAM_NEGATIVE 1 27 27 -
Phobius 1 7 7 -
SignalP_EUK 1 27 27 -
Phobius 8 19 12 -
Phobius 20 27 8 -
Phobius 28 278 251 -
Gene3D 30 133 104 7.4E-21
ProSiteProfiles 30 133 104 17.367
Pfam 35 130 96 8.7E-19
PANTHER 44 628 585 9.5E-141
PANTHER 44 628 585 9.5E-141
ProSiteProfiles 139 247 109 20.164
Gene3D 141 247 107 6.7E-26
Pfam 154 243 90 1.5E-13
MobiDBLite 249 273 25 -
Phobius 279 300 22 -
TMHMM 279 301 23 -
Gene3D 301 414 114 5.9E-35
Phobius 301 664 364 -
SUPERFAMILY 327 626 300 3.1E-78
ProSiteProfiles 339 613 275 36.909
SMART 339 613 275 3.2E-29
Pfam 340 541 202 2.0E-45
CDD 345 609 265 3.10132E-88
ProSitePatterns 345 367 23 -
Gene3D 415 616 202 9.9E-57
ProSitePatterns 460 472 13 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.

Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0129600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…