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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0130500 |
| Transcript ID | LotjaGi1g1v0130500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like protein kinase; TAIR: AT4G21410.3 cysteine-rich RLK (RECEPTOR-like protein kinase) 29; Swiss-Prot: sp|Q8S9L6|CRK29_ARATH Cysteine-rich receptor-like protein kinase 29; TrEMBL-Plants: tr|G7KDB1|G7KDB1_MEDTR Cysteine-rich receptor-kinase-like protein; Found in the gene: LotjaGi1g1v0130500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:20948629..20954524) extracted from Lotus japonicus Gifu genome v1.2.
GTCTAATGGGACACCGGTCTAATTGGCTAATAACAAAATTACATGAATTGAAAAGTAGGAAATTGACTTCAATAAGTCTT GGTAATAAAGTGGAACATGACCCGGCCCCTGATTTAGCAATAGAAGCTCTTCATTCATATTCATTGTTTTATTGCTTATT CTGGTCATTGAGAGGAGCACAATCACAAGATTCACTATGGTAGTTCTTCCTTGCAGGTTCATTTGCTTTCAATGCTTTCT CCTTCTCATGATCATGGTGTCTGATCAAGCCAGAGCCCAGTCAGACATATCTCCCTTTTGCATGAATGACAAAGGCAACT ACACCCTCAACAGCACCTACCACAACAACCTCAACACCCTCCTCTCCAATCTCCTTTCCAACACAGAAATCAACTATGGT TTCTACAATTTCTCCTCTGGTCAAGGCATTGACAAAGTTTCAGCCATAGGACTCTGCAGAGGCGATCTCAAACCTGATGA TTGCCTCAGCTGCCTCAACAACTCAAGGGTCCTCCTCACACAAAAGTGTCCAAATCAAAAAGAGGCAATTGGGTTCGCTG AGAAGTGCATGGTGAGGTACTCAAACAGGTCCATCTTTGGCACCATGGAGACTCGTCCTGGGGTGTACTTGTGGAACGTT AACAATGCAACAAAGGTGTTCTCATGAATCAATTATCCTCAAAGTTTAAGTATTTATAAGTTATAACATGCCCTCTCACA TAATGATTCCATTGAGCTTAAGCGTAGCCAATACATAGGTTCACCTACCTTATGGAGAATTTTTCCTTTTATTAGAATAA TTAGAGGCTACTATGATCGAACTTTTGCCCACTTGAATCGACCATAGAATCTCTCTCTGATATCGTGTCATGATCCACTT ATTCCAAAAGCTTAAGCAGTTTGATAAATGTCATATGAATAATTTTGTATTATATTTTTTATTAGGCGGATGAGTTCAAC CAAGCGCTGAGGAACTTGATGTATAGTTTGAGAAACACGGCTAAGTCAGGGGACTCACGTTTAAAGTATGCTACTGGAAA TGTTTCTGGTCCAGATTTTCTAGATTTGTATGGTCTGGTGCAGTGCACTCCTGATCTGTCTAGCCTTCAATGTGATGACT GCTTGTCTGGGGCTGTTGGAGAGTTGCCAGGATGTTGTGATAGTAAGATAGGTGGGAGAGTTATTAGACCAAGTTGTAAT ATTAGATATGAAATCAGCCCGTTCTATGAAACGCCGCCACCACCACCACCACCGCCATCCTTATCAACACCGCCAACTTC AGCATCCACTAATAATACTACCTCAGAAGGTACTGTCTCATTTTATTCAATGTTGTAGTTAAATCTGGGCCACCCAAAAT GAACCAGGAGTTGACTTCATTCATGTTTTTGGATTGTATACAAAATTACAAATATCCCACCAAGGATTCTGATTTGTGCA GGGAAGAGCAACACATCTAAAATTATTGCAGTAGCCATAGCGGTTCCAGTTGTTGTTGTTGCTTTGCTGCTCATTTCTAT CTGCATCTATTTAAGAGTGAAGAAGCAAAGAGAAAATGTTCAAAGTAAGTCCAAGGCCTCCAAGCATGAATTTACTGTCA CTTGTCATGAACATAGTCTTATTAATTTTAAGGGATATACAATGACATAACTCATTTTGAGAACAAGTGTTGTTTGGATC AGCATTGTTAGAATTGATTGTTGACAGATATAACTCAGATAAAATTGATGATGGTAAAATTGAGTTTAAAATGAAGGAGA AGCAGGGATTTAATGACTTTTCCTTCTTGTTTCACATTTAGAAATTTTATCTTTCAATTTTCTTGTTTGGTTGTACTTAC CATATAAAAACTTATTTGTTTAACCCAATTTCACAGTTCCTTCACAAGATGATGATGGTTATGATGATGAAATCATAACC AATGACTCACTGCAATTCAAGTTTGACACCATACGAGTTGCTACGAATGACTTCTCGGATTCTAATAAGCTTGGAGAAGG CGGATTCGGAGCTGTTTACTGGGTAAGATAACATTGTTTCATTCAGATATATGTTCATCAAAACATAGCATAACATGCTT GGCTATGACAAAAATGTTGTACCTGATACAAATTTATGTTCAGGGTAAGCTATCTAATGGACAAGTTATTGCTGTCAAAA GATTGTCAATAAATTCTGGCCAAGGAGATACAGAGTTTAAGAATGAAGTGCTTCTAGTGGCTAAGCTTCAACACAGAAAT CTAGTTAGGCTACTTGGTTTCAGTCTGGAAGGGAGAGAAAGGCTCCTAATCTATGAATATGTTCCAAATAAAAGTCTTGA CTACATAATATTTGGTAAGTTAAAATATTGCATAGTTATATTGTTTTTCTATTACTAGCATGTTTGAGTTTGCGTTTCAT TCACTCAAAATCAATTTTACCTCTCGGAACCTACTAGAAGTAGCTTCTCCCCACCACTTCAGTAAAATTTGATTCTACTT AAATGTGGAAATCAAATGAAATTCCAAACATGCCAGTATACTTCAATTCTGGTTTCAAGACAAAGACTAACTACTTATAT AGCTTTAAAATTCACACGATTTTGGTGTACATGTAGATCCAACAAGGAAAGCACAACTGGATTGGGAAAGGCGCTACAAA ATCATACAGGGGATTGCTCGAGGCCTTCTCTACCTTCATGAGGATTCGCGATTGCGCATTATACATCGTGATCTCAAAGC AAGCAATATTCTCCTAGATGAAGAAATGAATGCTAAGATAGCAGATTTTGGCATGGCAAGACTGATTGTAGTGGATCAAA CACAAGGAAATACGGGTAGAATTGTTGGAACCTAGTAAGTGCTAGAATGTGTTAGAGCCTACTATTGTCATAAGAGCAAA ATTTGAATCAACTAACAACTTTTTTTTACATTATCACTCAGTCATGTATTGATACTTTTACACTAACATGAAATCAAAAT TAGAACTCTGCTATAAATACTATCTGTCACATGTGACAATTGAAATAGTTAAAAACTTAATCTTTTAACAGATCATAGCA TTTATTGTTTACTGATTAAGTTTGTCCATGTTGGCATGTAGTGGATATATGGCACCAGAGTATGTAATGTATGGACAATT TTCAGTAAAATCAGATGTCTACAGTTTTGGAGTGCTGGTTCTTGAGATTATATGTGGTCAAAAAAACAGTGGCATTCGTC ATGGCGAGAATGTGGAGGATCTCTTGAGTTTTGTAAGTCTTTCTTTTCTCACTGCTGTTTCTTCCTTGGCATTATGAATT AGAATATTAATGGCTCCTAAACATTAATATAGGACTGGGATACTTGACCTTCGCTTAATTAAGCGCTTATATGATAATAA ATACTTTAATTTATAAGCTAAGATGGAAATTTATCAAAATAAGCTCAAAAAAATGTATAGTGAGGTCATATGCTTAATCA AACACCAGCTTAAATGTTTTATGTTCAAATAAGTTTTTCTAAAAGCACCCTTAATAGTATACAGTTATTTATAAGTGAGA AAATTCTTGCAGGCCTGGAGAAACTGGAGGGAGGGGACACCTACAAATATTATAGATCCAACATTAAACAACAGTTCAAG AAGTGAAATGATAAGATGCATTCACATTGGTCTACTTTGTGTTCAAGAAAACATGGCCAATAGACCACCTATGGCTACCA TTGCACTCATGCTTAGCAGCTATTCTCTCACTCTACCAGTTCCTTCAGAACCTGGAAGTTTTATGGAGAGTAGAATTAGA AGCCTCCCAAACACCTCTTCGTCGGAAAATAATTCAGGGGCAACAAGATCAAGTGATTCCATGAATAAATCACCTCAAAA GTCAATAAATGAGGCTTCAATTACTGACCTGTACCCTCGTTAATTAGATTCTGGTCATTGGGGTGATGATAGTATTCACT TATCATCAATGTTTCATCCAAAGTAGGAATGTTTTGGGATTTGCTCGTGCAAAGACTTGGTTAAATAGACCATGGATCTT ATTTTTTGAAAGTGAATCAGAAACTGTAATAACATTCAATTGGTTTTGAAGTGTATGGTTTGAGAAGTTGGCTACGAGTT CCACTTTGTGTTCTTTCCACACTAATGTATTTCTTTATTGATGTAGAGTTCTGAGTTTGTGTTGCACCTGTTAGCAATTT GTTTACTTGAGTGGAAACCAACTTTCTCATACCTTTTTAATTAACTAAACTAACACCCTTGTTTTAAGGAGAAAGAACTG GTCTAAAATGAGCTTGGTTTATAACTGAGAAAGTAGTGCTGGAAACTCTGCTGTATCTCTGACTCCCAAGTGTTATACAA GGGGAAGTTACACCTATGAGGGACGACAACCAAAATTCGGCCAAAATTCAGGTACCAAAAACTGATTTAATCCAAAGTAA AATCATCATTATTATTTGCAAGTTGCAACCTACACCAGTTAGTCCACACCTCCAAATTCCAATGTTGAGAAGAAGGATCT TTAAAATTTGAGAAAAGTATCCTGAATCAACTGTCAGTAATGAGATCAAATATATATGTAATTTCATCTCGTGCGCTTGT TAAATTCTCAGGACCGCGTGAATGAAATGAGACCTAAGGAAGTTCATTTCTTGGAGACATTTGGCCATAAGAGAATCTGG GCATTGAGAGAGTCTCCACCCTTGTTTCGCAAGATCGTGGAGATTCATTGAAAACTGATTTTTATTCACAGCATGGAATT CAACACCAATTATCTTGTGTTGAAACTCCACAACAAAATGGTGTTGTGGAGAGAAAACATCAGCACATCCTGAATATTGC TAGGGCTCTTATGCTGCAATCTAACTTGACCCTTGAATTTTGGTCTTTTGCTGTGATTCATGCAGTATACTTAATGAATC TTTTACCAAGCAAGGTTTTATCTTACTCATCTCCTTTCATCATTTTGCATAACCTGAAACCAGACATTGAACACTTACGG GTTTTTGGTTCTTTATGTTATGCTACTTCCCTTACTGCACATAGAACAAAGTTTCAACCAAGAGCTAGGAAATGCATTGT TCTAGGACAGAAAGAAGGGGTCAAGGGATATCTTTTGTTTGATTTGAACACTAGAGAAGTTTTTCTTTCAAGAAATGTCA TTTTTTATGAAAATGTTTTTCCTTTTCAAGCAACTGACACAGTATCACTATCCTCTTTGTTCCCTGTTCCCTCACTCCCT ACTGATCTTAGTTCTTCCTCAGATGATTTCACTCCCCCACAGCCAGCTCAACTCGAGCCAGATACTACCATCATTTCTTC ACCCTTTTCATCACCCTTGTTACCACAGCCACCAGCCTTGAGACATTCCACTAGACAAACACAAAAACCTTCTTATCTCC AAGATTATCATTGTAACATAGCTCATACTTCTTCTCAGGCCTCTTCCTCTTCAGGTGTCTCTTATCCTATTTCAGATTAC ATATCCTATCACACACTCTCACCATCACATAGAAGGTTTGCTTTAGCTGTTTCTCAGGAAGTTGAACCTCATACATATAA TCAAGCAGTGAAGCATGAATGTTGGAGAAATGCCATGGACCTTGAAATTACTGCTCTAGAAAATACTCAGACTTGGGTTC TAACTGATTTACCACCTGGGAAACACCCTATTGGTTGCAAATGGGTTTTTAAGATCAAGAGACATGCAGATGGGAGCATT GAAAGGTACAAAGCTCGGTTAGTAGCCAAGGGTTACACTCAACAGCATGGTCTTGATTATTTTGAGACTTTTTCACCAGT GGTTAAGATGACCACAGTGAGATTAGTTCTTGCTATGGCAGCATCACATAACTGGCACTTGCAACAGCTGGATGTTAATA ATGCATTTCTGCATGGACATTTAGATGAAGAGGTCTACATGTCTCTTCCACCAGGA
CDS sequence (LotjaGi1g1v0130500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTAGTTCTTCCTTGCAGGTTCATTTGCTTTCAATGCTTTCTCCTTCTCATGATCATGGTGTCTGATCAAGCCAGAGC CCAGTCAGACATATCTCCCTTTTGCATGAATGACAAAGGCAACTACACCCTCAACAGCACCTACCACAACAACCTCAACA CCCTCCTCTCCAATCTCCTTTCCAACACAGAAATCAACTATGGTTTCTACAATTTCTCCTCTGGTCAAGGCATTGACAAA GTTTCAGCCATAGGACTCTGCAGAGGCGATCTCAAACCTGATGATTGCCTCAGCTGCCTCAACAACTCAAGGGTCCTCCT CACACAAAAGTGTCCAAATCAAAAAGAGGCAATTGGGTTCGCTGAGAAGTGCATGGTGAGGTACTCAAACAGGTCCATCT TTGGCACCATGGAGACTCGTCCTGGGGTGTACTTGTGGAACGTTAACAATGCAACAAAGGCGGATGAGTTCAACCAAGCG CTGAGGAACTTGATGTATAGTTTGAGAAACACGGCTAAGTCAGGGGACTCACGTTTAAAGTATGCTACTGGAAATGTTTC TGGTCCAGATTTTCTAGATTTGTATGGTCTGGTGCAGTGCACTCCTGATCTGTCTAGCCTTCAATGTGATGACTGCTTGT CTGGGGCTGTTGGAGAGTTGCCAGGATGTTGTGATAGTAAGATAGGTGGGAGAGTTATTAGACCAAGTTGTAATATTAGA TATGAAATCAGCCCGTTCTATGAAACGCCGCCACCACCACCACCACCGCCATCCTTATCAACACCGCCAACTTCAGCATC CACTAATAATACTACCTCAGAAGGGAAGAGCAACACATCTAAAATTATTGCAGTAGCCATAGCGGTTCCAGTTGTTGTTG TTGCTTTGCTGCTCATTTCTATCTGCATCTATTTAAGAGTGAAGAAGCAAAGAGAAAATGTTCAAATTCCTTCACAAGAT GATGATGGTTATGATGATGAAATCATAACCAATGACTCACTGCAATTCAAGTTTGACACCATACGAGTTGCTACGAATGA CTTCTCGGATTCTAATAAGCTTGGAGAAGGCGGATTCGGAGCTGTTTACTGGGGTAAGCTATCTAATGGACAAGTTATTG CTGTCAAAAGATTGTCAATAAATTCTGGCCAAGGAGATACAGAGTTTAAGAATGAAGTGCTTCTAGTGGCTAAGCTTCAA CACAGAAATCTAGTTAGGCTACTTGGTTTCAGTCTGGAAGGGAGAGAAAGGCTCCTAATCTATGAATATGTTCCAAATAA AAGTCTTGACTACATAATATTTGATCCAACAAGGAAAGCACAACTGGATTGGGAAAGGCGCTACAAAATCATACAGGGGA TTGCTCGAGGCCTTCTCTACCTTCATGAGGATTCGCGATTGCGCATTATACATCGTGATCTCAAAGCAAGCAATATTCTC CTAGATGAAGAAATGAATGCTAAGATAGCAGATTTTGGCATGGCAAGACTGATTGTAGTGGATCAAACACAAGGAAATAC GGGTAGAATTGTTGGAACCTATGGATATATGGCACCAGAGTATGTAATGTATGGACAATTTTCAGTAAAATCAGATGTCT ACAGTTTTGGAGTGCTGGTTCTTGAGATTATATGTGGTCAAAAAAACAGTGGCATTCGTCATGGCGAGAATGTGGAGGAT CTCTTGAGTTTTGCCTGGAGAAACTGGAGGGAGGGGACACCTACAAATATTATAGATCCAACATTAAACAACAGTTCAAG AAGTGAAATGATAAGATGCATTCACATTGGTCTACTTTGTGTTCAAGAAAACATGGCCAATAGACCACCTATGGCTACCA TTGCACTCATGCTTAGCAGCTATTCTCTCACTCTACCAGTTCCTTCAGAACCTGGAAGTTTTATGGAGAGTAGAATTAGA AGCCTCCCAAACACCTCTTCGTCGGAAAATAATTCAGGGGCAACAAGATCAAGTGATTCCATGAATAAATCACCTCAAAA GTCAATAAATGAGGCTTCAATTACTGACCTGTACCCTCGTTAA
Protein sequence (LotjaGi1g1v0130500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVVLPCRFICFQCFLLLMIMVSDQARAQSDISPFCMNDKGNYTLNSTYHNNLNTLLSNLLSNTEINYGFYNFSSGQGIDK VSAIGLCRGDLKPDDCLSCLNNSRVLLTQKCPNQKEAIGFAEKCMVRYSNRSIFGTMETRPGVYLWNVNNATKADEFNQA LRNLMYSLRNTAKSGDSRLKYATGNVSGPDFLDLYGLVQCTPDLSSLQCDDCLSGAVGELPGCCDSKIGGRVIRPSCNIR YEISPFYETPPPPPPPPSLSTPPTSASTNNTTSEGKSNTSKIIAVAIAVPVVVVALLLISICIYLRVKKQRENVQIPSQD DDGYDDEIITNDSLQFKFDTIRVATNDFSDSNKLGEGGFGAVYWGKLSNGQVIAVKRLSINSGQGDTEFKNEVLLVAKLQ HRNLVRLLGFSLEGRERLLIYEYVPNKSLDYIIFDPTRKAQLDWERRYKIIQGIARGLLYLHEDSRLRIIHRDLKASNIL LDEEMNAKIADFGMARLIVVDQTQGNTGRIVGTYGYMAPEYVMYGQFSVKSDVYSFGVLVLEIICGQKNSGIRHGENVED LLSFAWRNWREGTPTNIIDPTLNNSSRSEMIRCIHIGLLCVQENMANRPPMATIALMLSSYSLTLPVPSEPGSFMESRIR SLPNTSSSENNSGATRSSDSMNKSPQKSINEASITDLYPR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 27 | 27 | - | – | |
| SignalP_EUK | 1 | 27 | 27 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 27 | 27 | - | – | |
| Phobius | 1 | 27 | 27 | - | – | |
| Phobius | 1 | 7 | 7 | - | – | |
| Phobius | 8 | 19 | 12 | - | – | |
| Phobius | 20 | 27 | 8 | - | – | |
| Phobius | 28 | 281 | 254 | - | – | |
| ProSiteProfiles | 30 | 133 | 104 | 18.444 | ||
| Gene3D | 30 | 133 | 104 | 3.2E-22 | ||
| Pfam | 35 | 130 | 96 | 7.2E-20 | ||
| PANTHER | 44 | 631 | 588 | 8.1E-141 | – | |
| PANTHER | 44 | 631 | 588 | 8.1E-141 | – | |
| ProSiteProfiles | 139 | 246 | 108 | 22.165 | ||
| Gene3D | 141 | 246 | 106 | 3.0E-28 | ||
| Pfam | 150 | 242 | 93 | 2.1E-14 | ||
| MobiDBLite | 245 | 276 | 32 | - | – | |
| MobiDBLite | 246 | 262 | 17 | - | – | |
| Phobius | 282 | 305 | 24 | - | – | |
| TMHMM | 283 | 305 | 23 | - | – | |
| Phobius | 306 | 680 | 375 | - | – | |
| Gene3D | 310 | 423 | 114 | 9.4E-36 | – | |
| SUPERFAMILY | 336 | 650 | 315 | 3.1E-80 | ||
| SMART | 348 | 622 | 275 | 1.3E-27 | ||
| ProSiteProfiles | 348 | 622 | 275 | 37.361 | ||
| Pfam | 349 | 551 | 203 | 2.8E-45 | ||
| ProSitePatterns | 354 | 376 | 23 | - | ||
| CDD | 354 | 618 | 265 | 2.28157E-93 | – | |
| Gene3D | 424 | 625 | 202 | 1.1E-57 | – | |
| ProSitePatterns | 469 | 481 | 13 | - | ||
| MobiDBLite | 634 | 680 | 47 | - | – | |
| MobiDBLite | 638 | 673 | 36 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0130500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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