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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0196800 |
| Transcript ID | LotjaGi1g1v0196800.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | C2 and GRAM domain-containing protein; TAIR: AT5G50170.1 C2 calcium/lipid-binding and GRAM domain containing protein; Swiss-Prot: sp|Q9FGS8|C2GR2_ARATH C2 and GRAM domain-containing protein At5g50170; TrEMBL-Plants: tr|A0A0R0K9Z2|A0A0R0K9Z2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0196800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:39829436..39835755) extracted from Lotus japonicus Gifu genome v1.2.
CCAAAACCCATTCTCACTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTCTCCACCATGCCACTTTGCTTTT GGTTCTTGCATGCGTTTCAAGTTGAACCGAGTGTCGTTTATATAAGCGCGTGATGTTGAGGTTACATGTGTGTGTATTGG AAGCGAGAGACTTACCCGCCGTGAAGGACTCTTATTATTTTGTGAAGCTTAAACTTGGGAAATCCAAGTCCAAGACTTGT ATGGTATTGACGAACACGAACAACCCTGTTTGGAACGAGGAGTTTGTTTTCAAGGTGCGTGATCAGGACGTGCTTGTTGT CTCTGTTCTAAACAGTCATCATTTTCTTCTGGGTGAGGTGCGGATTCCTGTTAAGAAGCAATTAACCTTGCAGCCAACGT GGTTCTCCCTTCAGACTGACAAGTTTCTCAACAAGTATTGTGGTTTGTTCCCTTTTCTATGTTGCTTGCATTATTGCATT TATGAATTTTGATAGATTATATGATATATGCTGCTTCAAACTTCAAATACTCCTTGTACTATAATTGAGAATGTTTATGA GAAATTATTATCAAAGATTAGAAATAATGAACTGCATGCATTAAAGCCTGCTTTGCTTGGATTATTAGCTTGTTTTGAGG AAATAACTTCTTTCGCAGCTTCAACTTTTGAAAGAACAAAATAATTCTAAAAACTTAAGCTAAAACAAGAATGAATGTTA GTTGTATATATGTACAATGGAAGCAAGAACATATATGATCATTCCAGTACTTGGTTTCTGATAAAAATAAATTCCCATTT TTTGAATACGATTTAAGATTCTTTTACCCATTTAAATGTGATGATACTTCACTACACTGGTAGATCATATGATAGAGCAC TGCCTAACAGTGGCTGCATTTTAGCATTTAAGTTGCACGCTTTTATCATGTGAGAAACTGATCGAGATAAGCTGACGATA GCTTATAAGTAAGAATAAACTCTTATTTAACCGCTTATGAAAATAAGCTCAAAGCGGCCTATAGGTCTCAGAAACACTTG CATAGCTGCCCATGCACATGCAATAAGATAAACTCAAATAGGCTCTTACTTTTATTAGAAGGTCTATAATTTATGTATCT AAAGGTGTTTTACTGATAACGTGGTAAATTTCCAAATTAAGAGGACAAGTGATTCTGATGTTTTTTTTTTATAAGCAAGT GATTCTGATGTAACACTAAAGGAAAAGAAAAACCACACAGTAGTTATAATTTCCATCCCAAAATTATCATCAAGTCACTA ATAGTAGATTCTAAGAGGTTCAAATTCAATGGGAGATATACTGTTACTAAGGAACTCAAATTGGAAGTAATAATAAACGT GCCTTCAGGACAAAACTAATTGGTGCTGCATTTGGCACTCTAGTAATTTCAATTTTAAGTTGTACATTGTTTTGTTCCTC GTATTGTTTGCAATATTTTTTTCTCAATTTTGGGATTTCAACATATATTGAACTGACTTTATCTCAATGTGTTGGACTTG TATAATCAGGGAAAATTCTTCTTGCCATTTCTCTTTATGGTAAAAGCCACACTTCTTTAATCAATCATAAACATTCTCCA AATTCAAATATTTCAATTGAGGACTCTAAAGACTTCAAAGGTTTGAAGATTTTATCCAAGGCACCTTATTGCAAAATGGG TGAAGGCAAACAGTTGTTTAAGGTTATTGCTAATCGTCTTGACAGAATTTTCAATAAGAAAGAAGGAAACTCAGCAAAAC CAGGAGATTCTTCAGAAATATCCACTTCATTATCTGACTTTGAAGACATTGCACATGCAAATGAAAATTCATCCCCTTGC AGCTTTGAAGGAGCTATTGCGCAAATGGAATCGAGACATGACAAACAAGAAATGCCTGAAAATTTGCATGGTGGTGTATT AGTAGATCAGATCTACGCAGTGTCTCCTCACGATCTAAATGCCATTCTTTTCGCACCAGATTCACAGTTCAGGAAAGATT TAGCAGAACTACAAGGAACAAAAAATATGCAAGAGGGGCCTTGGACATGGAAAGATGGAGACATGTCTCGTTTGGCCCGA GTTGTTTCCTTTACAAAGGCTGCTACAAAGTTGTTTAAGGCTGTTAATGCCACTGAGGAACAAACCTACATTAGAGTGGC TAAAGAGGAATTTGCAGTACTTGTTAGTGTTAACACACCTGAAGTTCCATATGGGAACACATTTCAGGTTGAACTTCTTT ACAAGATAATGCCTGGAGGAGAGTTATCTGATGAAGAGGAATCCTCTCATCTTGTTATTTCATGGGGCATTATCTTCCTT CAAAGCACAATGATGAAAGGCATGATAGAATCTGGGGCTAAACAAGGATTGAAGGATAGTTTTGACCAGTTCTCAAACCT ACTTGCACAGAGATTCAAGGTGCTAGATAAGGCTGATTTATCAGACAAGAAACACTTGTTGGCAACTTTGCAAACAGAAG ACCAGTGGCATTGGTGGCAGGCAGCAACATATTTTTGGAATTTCACTTTTGTTTCAACCCTTTTAATGTTTTTGTATGTG TTGGTTCATATTTTGAGGTGTGGTCCAAGTCATCCTCAGGGCTTGGAATTTAGTGGGATTGAATTGCCCGATAGCTTTGG AGAGCTTGTTACAAGTGGAATTTTAATCATCCAGATGCAACGTGTATATAACATGATCTCTCACTTCGTGCAAGCTAGAT TTCAAATGGGTAAGCATATTATTTGAACCTACTAGCTGAGTGAACCCTCAAATTCGCCACAGTATCGGGCATGTTCCTTC TTGAAGAAGGAAATACTGTCAGAAGTCCTTGAATGTGTCAATCATCACTCAAGTTGGTCCTTCCATTACTTTTGGGCAAC TAATGTTAAATGACTTTTGAAGTGACGAGGGCCAACTTGACTAACAATCGACACACCATCAGAAGTCCCTGAATTTGGCA ATCGCCAGTCAAGTTGGTCCCTCCGTCACTTTTGGTTAACTAATTTATAATTTTTTGAATTGACGGACGCATCAACTTGG CTAATGATTTTTTGAAGGTATTTTCTTCTTTTAGGGATGATCCTGGCTGACACTATAGACGAATTTGAGGGTTCACTTCA CTCCGCAGTACCATGCTTAATATAATTTTTTAGTGACTTCACTTGAGTGTTTAGTTTTGACTTCATTCTCTTCTCACAGG ATCTGACCATGGCCTGAAAGCCCAAGGCGATGGATGGGTTGTAACTGTTGCTTTGATTGAGGGGACTGACCTGGCCTCCA TGGAGTCAACAGGTTTGTCAGATCCCTATGTGGTTCTCACCTGTAATGGACAGACAAGATCAAGCTCTGTCAAGCTTCAA ACATCCGATCCTCAATGGAATGGTCTGGATTTCTAACTTGCTACTTATCAGCAAAAAACAAAAAATTGTTTTGATATGAA CACATCTTTGTAGATATTATATGTTAGTTTTTTATACTATTATGCAGAGGTATTAGAGTTTGATGCTATGGAAGAACCAC CATCAGTTTTAGATGTGGAAGTCTTTGATTTTGATGGTCCATTTGACCAGGATGTTTCACTTGGACATGCCGAGATCAAT TTTCTGAAGCAAACATCAACAGAATTGGCAGACATGTGGGTCATGCTTGAAGGAAAGCTCGCTCAGTCTTCTCAATCAAA GTTGCATTTGAGAATTTTCTTAGACAATAACAAAGGTGTTGAAACAATCAAAGAGTATTTGGAGAAGAAGGAAAAGGAAG TAGGCAAAAAGGTGAGGAAATACATATCTTATTCACAATGCCTTGGTTTTATGCCCTTCAACCAATTTCTTGTTTCTCTC TTTGTGTCATAGAACATAACGAACTAACTAATTAATGGTTGAATGGAAGTTGAATCTTCGATCACCTCAAAGGAATTCTA CATTCCAGAAGTTGTTTGGGTTGCCTCCGGAGGAATTTCTAATCAAGGATTTCACATGTTCTCTGAAAAGAAAAATGCCT TTGCAGGTACTACATTGTTGACATATTTAAACACATTCTTTAATACTTCATTATGGAGAGTTGTTAGGATATGTTATGAA GAGCTAACATATAAAAATCTACTTTGTGAAATTTAAGTGATGAACTCCATAAACTAAATTTAAGATTCCTTTCTACTCAG GGTCGGCTATATCTATCGGCAAGGATTCTGGGGTTTTTTGCCAATTTGTTTGGACATAAAACTAATTTTTTCTTCCTTTG GGAAGATATTGAGGACATTCAAGTGCTTCCTCCATCATGGGCATCATTAGGAAGTCCTACATTGGTCATAATTCTTCGAG CAGGTCGAGGCATTGATGCAAGGCATGGTGCAAAGACTCAAGATGAAGAAGGGAGACTTAGGTTTCATTTTCAGTCATTT GTTTCATTTAGTGCTGCCTCCAGGTATTAGTGAGCATGCTTGTACTTCTAATCTATGTTGATGGTATATATGCACATTCA ACTGATCATAATTCTCTTGTCTACTATGCACATTAATTCAACTTACTTTTGTTTCTACAAAAGAATAATAATGGCCTTGT GGAGAACAAGAATGCTAAACCCGTATCAGAAAGAACAGCTCATAGAAGATCATGAGAGTCAAGAAGGCGTTGTAATTCCC GAAGATTCTGAATTAATCCTAGAGGATGAAGCAAAAATGTCCATCATTTACTCTGCAGAACTTCCAATTAACGTAAGCAA TCAATTACTAGTGTGACAATGAAATTGAAGATAAAATTTGATTGTTGTAATGTAATAGTAATTCTTTAATGTTTTGACAA TACATGATTGGATAATGTTTTAAATAAGTACTACGTTAAGAATATATCAAAATGATTCATAATTATATACATACCTCGAG ATTTCAGCAAGTCAATTTGGTAAAAAGGAGTTGTCAGATCTCCTTGGATGCAAATGACTAGTAGAGTGCAAGTTATCATA ACAGGTTTCATTTACAAATTAGCATTTATCGTATTTGAGAGAGGGCGAGCCTCGGTGCAATAGTAAGGTCGCCGCCATGT GGGTGGTCACAGACTCAAGCGGCCATGTGGGCGGTCACAGACTCAAGCCGTTGAATCAGTTTTTTGCAAAAATGCATAGT AAGGCTGCCTACATTACATTTACAAAGTGGATCCGGCCCTTCCCTGAACTTCATGCATAGCCCTTTATTTATTGTATTTG GTAGATATGGAACAGGGAACTTCCTTATGTGATGAATTTGTGATTACCTTCTTTCAGAACTAAGATTTTTGTGTACATAG CATTGAGTCTTTCTTTAATGCATTGTGTTACTCTTGCACAGATGAAGTCGGTGATGGGAATTTTTTGTGGAGGAAGCCTG GAGCATAAAATTATGAAGAGAACTGGATGTTTGAACTATGAAACCACAGCTTGGGAACAAGTAAAGCTCGGTGTCCTCGA AAGGCGTGTTTCATACCAAATCAATCTGCATGCTTCAGTTTTTGGTGAAGTCACATGTACACAACAAAAATTGCCAAATG CAAACACCGGAGGCTGGATTGTGAATGAAGTTATGACACTTCATGGTGTCCCATTTGCTGATCATTTTCGGGTATGGTAA ACTGAAAAATCAGCCTCAATTGTTTGTGTCATAAATCAGTGTTGTTGAGTGGAAAGCCAAAAATCTGCTATATCAAAGCC CGCAAAGCGGAATTAGTGGATAGCAGAGAGCCCTTAAAGCGCTATGCTATAGCCCTATAGCATGGCGATAACCACTATTT GATAGCACTGTCATAAATTGAATTAATCTAGTTTCATGGAAATTCTATCTTTGTCTGCAGATTCATTTTAGGTACGAAAT TGAGAAATCCGTTCTTGGTGACTGTGCTTGTAAGTGTGAAGTGTATAATGGAATCATGTGGCTTAGGAGCTCTAAGTTTC AACAAAGGATCAACCGGAACATAACAGCCAAGTTTAGCGTTAAGTTGAAGGAAACATTTGAACTGGTTCAGAAAGAGATT TTGTTGATGTCTCAGAACTCACATGGCTAACCTTTTTTGACAAACATGGCTAACGTTGAAAGGATAAAATTGTAGTAGGC ACACACAAAAATTGCATTATGTAGAGCAGTAGAAGCAAGATTACATTTGTGTAGAGCATTTAGGTTTATTAGTTATCAAT AAAAAGAAGAAAATTTTAATTTTTTTTTCCTACCATAGATGTCTCAATAACGGACAATACTAAGTTTTCTGGGTTCATGG AGCCGGCTCGTACTACTCAAATTGGTATATATCTCAAAATACAAAATTTATATTTTAATGCATTATTACTATTGGTATAG
CDS sequence (LotjaGi1g1v0196800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTGAAGGCAAACAGTTGTTTAAGGTTATTGCTAATCGTCTTGACAGAATTTTCAATAAGAAAGAAGGAAACTCAGC AAAACCAGGAGATTCTTCAGAAATATCCACTTCATTATCTGACTTTGAAGACATTGCACATGCAAATGAAAATTCATCCC CTTGCAGCTTTGAAGGAGCTATTGCGCAAATGGAATCGAGACATGACAAACAAGAAATGCCTGAAAATTTGCATGGTGGT GTATTAGTAGATCAGATCTACGCAGTGTCTCCTCACGATCTAAATGCCATTCTTTTCGCACCAGATTCACAGTTCAGGAA AGATTTAGCAGAACTACAAGGAACAAAAAATATGCAAGAGGGGCCTTGGACATGGAAAGATGGAGACATGTCTCGTTTGG CCCGAGTTGTTTCCTTTACAAAGGCTGCTACAAAGTTGTTTAAGGCTGTTAATGCCACTGAGGAACAAACCTACATTAGA GTGGCTAAAGAGGAATTTGCAGTACTTGTTAGTGTTAACACACCTGAAGTTCCATATGGGAACACATTTCAGGTTGAACT TCTTTACAAGATAATGCCTGGAGGAGAGTTATCTGATGAAGAGGAATCCTCTCATCTTGTTATTTCATGGGGCATTATCT TCCTTCAAAGCACAATGATGAAAGGCATGATAGAATCTGGGGCTAAACAAGGATTGAAGGATAGTTTTGACCAGTTCTCA AACCTACTTGCACAGAGATTCAAGGTGCTAGATAAGGCTGATTTATCAGACAAGAAACACTTGTTGGCAACTTTGCAAAC AGAAGACCAGTGGCATTGGTGGCAGGCAGCAACATATTTTTGGAATTTCACTTTTGTTTCAACCCTTTTAATGTTTTTGT ATGTGTTGGTTCATATTTTGAGGTGTGGTCCAAGTCATCCTCAGGGCTTGGAATTTAGTGGGATTGAATTGCCCGATAGC TTTGGAGAGCTTGTTACAAGTGGAATTTTAATCATCCAGATGCAACGTGTATATAACATGATCTCTCACTTCGTGCAAGC TAGATTTCAAATGGGATCTGACCATGGCCTGAAAGCCCAAGGCGATGGATGGGTTGTAACTGTTGCTTTGATTGAGGGGA CTGACCTGGCCTCCATGGAGTCAACAGGTTTGTCAGATCCCTATGTGGTTCTCACCTGTAATGGACAGACAAGATCAAGC TCTGTCAAGCTTCAAACATCCGATCCTCAATGGAATGAGGTATTAGAGTTTGATGCTATGGAAGAACCACCATCAGTTTT AGATGTGGAAGTCTTTGATTTTGATGGTCCATTTGACCAGGATGTTTCACTTGGACATGCCGAGATCAATTTTCTGAAGC AAACATCAACAGAATTGGCAGACATGTGGGTCATGCTTGAAGGAAAGCTCGCTCAGTCTTCTCAATCAAAGTTGCATTTG AGAATTTTCTTAGACAATAACAAAGGTGTTGAAACAATCAAAGAGTATTTGGAGAAGAAGGAAAAGGAAGTAGGCAAAAA GTTGAATCTTCGATCACCTCAAAGGAATTCTACATTCCAGAAGTTGTTTGGGTTGCCTCCGGAGGAATTTCTAATCAAGG ATTTCACATGTTCTCTGAAAAGAAAAATGCCTTTGCAGGGTCGGCTATATCTATCGGCAAGGATTCTGGGGTTTTTTGCC AATTTGTTTGGACATAAAACTAATTTTTTCTTCCTTTGGGAAGATATTGAGGACATTCAAGTGCTTCCTCCATCATGGGC ATCATTAGGAAGTCCTACATTGGTCATAATTCTTCGAGCAGGTCGAGGCATTGATGCAAGGCATGGTGCAAAGACTCAAG ATGAAGAAGGGAGACTTAGGTTTCATTTTCAGTCATTTGTTTCATTTAGTGCTGCCTCCAGAATAATAATGGCCTTGTGG AGAACAAGAATGCTAAACCCGTATCAGAAAGAACAGCTCATAGAAGATCATGAGAGTCAAGAAGGCGTTGTAATTCCCGA AGATTCTGAATTAATCCTAGAGGATGAAGCAAAAATGTCCATCATTTACTCTGCAGAACTTCCAATTAACATGAAGTCGG TGATGGGAATTTTTTGTGGAGGAAGCCTGGAGCATAAAATTATGAAGAGAACTGGATGTTTGAACTATGAAACCACAGCT TGGGAACAAGTAAAGCTCGGTGTCCTCGAAAGGCGTGTTTCATACCAAATCAATCTGCATGCTTCAGTTTTTGGTGAAGT CACATGTACACAACAAAAATTGCCAAATGCAAACACCGGAGGCTGGATTGTGAATGAAGTTATGACACTTCATGGTGTCC CATTTGCTGATCATTTTCGGATTCATTTTAGGTACGAAATTGAGAAATCCGTTCTTGGTGACTGTGCTTGTAAGTGTGAA GTGTATAATGGAATCATGTGGCTTAGGAGCTCTAAGTTTCAACAAAGGATCAACCGGAACATAACAGCCAAGTTTAGCGT TAAGTTGAAGGAAACATTTGAACTGGTTCAGAAAGAGATTTTGTTGATGTCTCAGAACTCACATGGCTAA
Protein sequence (LotjaGi1g1v0196800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGEGKQLFKVIANRLDRIFNKKEGNSAKPGDSSEISTSLSDFEDIAHANENSSPCSFEGAIAQMESRHDKQEMPENLHGG VLVDQIYAVSPHDLNAILFAPDSQFRKDLAELQGTKNMQEGPWTWKDGDMSRLARVVSFTKAATKLFKAVNATEEQTYIR VAKEEFAVLVSVNTPEVPYGNTFQVELLYKIMPGGELSDEEESSHLVISWGIIFLQSTMMKGMIESGAKQGLKDSFDQFS NLLAQRFKVLDKADLSDKKHLLATLQTEDQWHWWQAATYFWNFTFVSTLLMFLYVLVHILRCGPSHPQGLEFSGIELPDS FGELVTSGILIIQMQRVYNMISHFVQARFQMGSDHGLKAQGDGWVVTVALIEGTDLASMESTGLSDPYVVLTCNGQTRSS SVKLQTSDPQWNEVLEFDAMEEPPSVLDVEVFDFDGPFDQDVSLGHAEINFLKQTSTELADMWVMLEGKLAQSSQSKLHL RIFLDNNKGVETIKEYLEKKEKEVGKKLNLRSPQRNSTFQKLFGLPPEEFLIKDFTCSLKRKMPLQGRLYLSARILGFFA NLFGHKTNFFFLWEDIEDIQVLPPSWASLGSPTLVIILRAGRGIDARHGAKTQDEEGRLRFHFQSFVSFSAASRIIMALW RTRMLNPYQKEQLIEDHESQEGVVIPEDSELILEDEAKMSIIYSAELPINMKSVMGIFCGGSLEHKIMKRTGCLNYETTA WEQVKLGVLERRVSYQINLHASVFGEVTCTQQKLPNANTGGWIVNEVMTLHGVPFADHFRIHFRYEIEKSVLGDCACKCE VYNGIMWLRSSKFQQRINRNITAKFSVKLKETFELVQKEILLMSQNSHG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 278 | 278 | - | – | |
| PANTHER | 2 | 846 | 845 | 0.0 | – | |
| PANTHER | 2 | 846 | 845 | 0.0 | – | |
| ProSiteProfiles | 78 | 251 | 174 | 35.838 | ||
| Pfam | 82 | 231 | 150 | 1.2E-28 | ||
| Phobius | 279 | 300 | 22 | - | – | |
| Phobius | 301 | 548 | 248 | - | – | |
| Gene3D | 349 | 484 | 136 | 1.2E-26 | ||
| SUPERFAMILY | 364 | 488 | 125 | 1.13E-24 | – | |
| Pfam | 365 | 464 | 100 | 3.1E-16 | ||
| SMART | 365 | 463 | 99 | 7.1E-12 | ||
| CDD | 366 | 466 | 101 | 2.52453E-20 | – | |
| ProSiteProfiles | 366 | 448 | 83 | 12.913 | ||
| Gene3D | 514 | 583 | 70 | 2.2E-11 | ||
| SMART | 517 | 583 | 67 | 2.5E-21 | ||
| Pfam | 518 | 588 | 71 | 1.0E-12 | ||
| Phobius | 549 | 573 | 25 | - | – | |
| Phobius | 574 | 584 | 11 | - | – | |
| Phobius | 585 | 601 | 17 | - | – | |
| Phobius | 602 | 620 | 19 | - | – | |
| Phobius | 621 | 640 | 20 | - | – | |
| Phobius | 641 | 849 | 209 | - | – | |
| ProSiteProfiles | 678 | 848 | 171 | 29.388 | ||
| Pfam | 682 | 822 | 141 | 2.7E-21 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0196800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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