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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0282500 |
| Transcript ID | LotjaGi1g1v0282500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like kinase; TAIR: AT1G66920.2 Protein kinase superfamily protein; Swiss-Prot: sp|P93604|LRK10_WHEAT Rust resistance kinase Lr10; TrEMBL-Plants: tr|G7I982|G7I982_MEDTR Receptor-like kinase; Found in the gene: LotjaGi1g1v0282500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:68883248..68885886) extracted from Lotus japonicus Gifu genome v1.2.
TTAAAATTTCCACCAAGTATATTTTTTAATGCTTGGGATAAGGGGAGCTCAGAGTTGCAAATTCTTTTGAACCGAGACAG GTCCTTGCCCTGCACAGTGCCAACAGCTAAGAAAATGAGCATTTGTTTAGTAAAGATGTTCTCTTGTTTTGGATTGTTAT TGTTTATGCTTTGCTTCAATGTTGTTACTGTGGAGCTTGCACTTGGCAATGACATAGACACAGACATAGCTAACTGTCCA GATTTATCATGCGGAAATCAGGTGATCCGATTCCCTTTCCGAATCCTAGATCGCCATCCTACAACCTGTGGTTATCCGGG CTTTGATTTATCTTGTTCCTCTAAAAACAACACAGAGATTGAACTCCCTCACCCAGTGAAGCTCAACGTCAAAAACATTG ATTACAGACACCAAACAATTGAATTATCTGATCCATATGGCTGTCTTCCCAAGCAGCTCCAATACCTCGCTCCATCAGCC TCCCAATTCCAGTTCCAGCAAGGTGGCTATCATTTTTTCAATTGTTCAGTGACGAACAAAGGTTCACTTTTGGACTACTC CTATTTGGTTCCATGTCTCAACACCTTAGGCTCTCAAGTGTATGCCGTTCCATCCAGTACACTCATGGAGGACCTGCCCC TGTCGTTTTGCACAAAAATGTTTAATATTTCTTACAACCCTTTTGATTTTCAAACTGATCAGGACTATATTCTTCGCTTG ACATGGTCTAAGCCCAACTGTCAACAATGCGAATCAAAAGGGAGAAGATGTGTGTGGAACAATCATGCTGCAAACAATGG AATATATTGTTTTTCCGATCATAAAGGTATGTTGGTAACCTTTTCATTCTATACTATTTTGAGTCTTTTTTCTACGATCG GATAAGATCTCAAATCAACTAGGGTTTATAAAGCTTCAGCAATCCTTAACTTAGAAGCTAGTTTTTGGGGTTCGGTAAAG CTAAGCCCAAATTTAAGATGTTGCTAACATGTTTGCAGGTTCTTCAAAAGCTCTAGTGACTACAGGTCAGCTTTCAAGTT TAGTTTCGATTTCCTATCAGTATCAACCTGAAGAAGCAAGTAAATGATTATTTTCTTACAATTTAGTTTTCTTAGTGCAG GATCAGTCCTAGGATCCTTGTTCTTTATGCTCTTGACTGCTGCAGTGTACCACGTCTACGACATTTACAGACTGAGAAAA GAAAAAGAAGCAATGTTCGTAAAATTTCTACAAGACTATAGAGCTCTGAAGCCCACCAGATACTCTTATGTCGAAATTAA GAGAATCACCAAAAATTTTGAGCACAAGTTAGGAGAGGGAGCCTTTGGAACTGTGTTTAAAGGAAACATTTCGAAAGAAA TTTCTATTGCTGTGAAGATCTTGAACATTTCACACGGAAATGGGGAAGAATTCATTAATGAAGTTAGCACCATGGGTAGA ATCCACCATGTTAACATTGTTCGCATGGTGGGTTTCTGTGCTGATGGCTTTAATAGAGCTCTTGTATATGAATTCTTACC AAACGGTTCACTGCAGAAGTTCATCAATTCACCAGACAACAGGCAAAACTTCCTTGGTTGGAAAAGACTTTATGAAATTG CTTTAGGAATAGCCAAGGGAATTGAGTATCTTTACCAAGGTTGTAATCAGCGCATTCTCCACTTTGATATCAAGCCTCAA AATGTGTTGCTAGACCACAACTTTGCTCCAAAAATATGTGACTTTGGTCTAGCTAAATTGTGTTCAAGGGATCAGAGCAT AGTGTCAATGACTGCAGCTAGAGGAACTCTGGGGTACATTGCTCCTGAAGTATTCTCAAGAAACTTTGGTAATGTTTCTG ACAAGTCAGATGTTTATAGCTATGGAATGATGCTGCTTGAAACAATAGGAGGGAGGAAGATCACGGAAGACATGGAGGAA AATACTAGCCATGTTTACTACCCAGAATGGATTCATAATCTTTTAGAAGAACACGAGGAAATGAGAATCCATATTCAAGA AGAAGGGGATTCAAAAATTGCAAGGAAACTGGCTATTGTGGGACTCTGGTGCATCCAGTGGTATGCCATGAATCGACCTT CAATGCAAATGGTGGTTCAAATGTTAGAGGGAGATGTAGAGACAGCTCCAATACCTCCTAATCCTTTTACTTCTTCAGCA GGTGCACGACCAAGGAGAACAATTGCTATTATGGGAGTTGCTGCGAGACAACTAACCAAAGATTTAGATGTAATCCAAGA GTAAGAGTGACTCATAGCTTACAACTACATTGGTGAAACACTGAAATACATTTTAGTTTATTTTGTCTTTCATTTGTCTT AGATATAAAGTTACATGTAGCACAAAAAGCTTTAAATATTAGATTTTTATTGGACTGGCAATTAAACATGTGAATAGTCC TATCAGACATACTTTCGTGTTAGAATTCTTGGCAATCAGCTTAATAATAGTGCATCTCTAATCTATGTTCTTCCTGTAAA GTTTGTAGCCACGAAAATCAATTTGCCAAATAAACCATGAGCACCTTTTTTTTTGTCACTGCATTGTGACAAGTGCTTGT TTATTGACGTAAAACCTAGGAAAATGTTGTTTATGGAGAGCCTATTGGAGTCATCATTCAAGACTTGAACTCCAATTAA
CDS sequence (LotjaGi1g1v0282500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGCATTTGTTTAGTAAAGATGTTCTCTTGTTTTGGATTGTTATTGTTTATGCTTTGCTTCAATGTTGTTACTGTGGA GCTTGCACTTGGCAATGACATAGACACAGACATAGCTAACTGTCCAGATTTATCATGCGGAAATCAGGTGATCCGATTCC CTTTCCGAATCCTAGATCGCCATCCTACAACCTGTGGTTATCCGGGCTTTGATTTATCTTGTTCCTCTAAAAACAACACA GAGATTGAACTCCCTCACCCAGTGAAGCTCAACGTCAAAAACATTGATTACAGACACCAAACAATTGAATTATCTGATCC ATATGGCTGTCTTCCCAAGCAGCTCCAATACCTCGCTCCATCAGCCTCCCAATTCCAGTTCCAGCAAGGTGGCTATCATT TTTTCAATTGTTCAGTGACGAACAAAGGTTCACTTTTGGACTACTCCTATTTGGTTCCATGTCTCAACACCTTAGGCTCT CAAGTGTATGCCGTTCCATCCAGTACACTCATGGAGGACCTGCCCCTGTCGTTTTGCACAAAAATGTTTAATATTTCTTA CAACCCTTTTGATTTTCAAACTGATCAGGACTATATTCTTCGCTTGACATGGTCTAAGCCCAACTGTCAACAATGCGAAT CAAAAGGGAGAAGATGTGTGTGGAACAATCATGCTGCAAACAATGGAATATATTGTTTTTCCGATCATAAAGGTTCTTCA AAAGCTCTAGTGACTACAGGATCAGTCCTAGGATCCTTGTTCTTTATGCTCTTGACTGCTGCAGTGTACCACGTCTACGA CATTTACAGACTGAGAAAAGAAAAAGAAGCAATGTTCGTAAAATTTCTACAAGACTATAGAGCTCTGAAGCCCACCAGAT ACTCTTATGTCGAAATTAAGAGAATCACCAAAAATTTTGAGCACAAGTTAGGAGAGGGAGCCTTTGGAACTGTGTTTAAA GGAAACATTTCGAAAGAAATTTCTATTGCTGTGAAGATCTTGAACATTTCACACGGAAATGGGGAAGAATTCATTAATGA AGTTAGCACCATGGGTAGAATCCACCATGTTAACATTGTTCGCATGGTGGGTTTCTGTGCTGATGGCTTTAATAGAGCTC TTGTATATGAATTCTTACCAAACGGTTCACTGCAGAAGTTCATCAATTCACCAGACAACAGGCAAAACTTCCTTGGTTGG AAAAGACTTTATGAAATTGCTTTAGGAATAGCCAAGGGAATTGAGTATCTTTACCAAGGTTGTAATCAGCGCATTCTCCA CTTTGATATCAAGCCTCAAAATGTGTTGCTAGACCACAACTTTGCTCCAAAAATATGTGACTTTGGTCTAGCTAAATTGT GTTCAAGGGATCAGAGCATAGTGTCAATGACTGCAGCTAGAGGAACTCTGGGGTACATTGCTCCTGAAGTATTCTCAAGA AACTTTGGTAATGTTTCTGACAAGTCAGATGTTTATAGCTATGGAATGATGCTGCTTGAAACAATAGGAGGGAGGAAGAT CACGGAAGACATGGAGGAAAATACTAGCCATGTTTACTACCCAGAATGGATTCATAATCTTTTAGAAGAACACGAGGAAA TGAGAATCCATATTCAAGAAGAAGGGGATTCAAAAATTGCAAGGAAACTGGCTATTGTGGGACTCTGGTGCATCCAGTGG TATGCCATGAATCGACCTTCAATGCAAATGGTGGTTCAAATGTTAGAGGGAGATGTAGAGACAGCTCCAATACCTCCTAA TCCTTTTACTTCTTCAGCAGGTGCACGACCAAGGAGAACAATTGCTATTATGGGAGTTGCTGCGAGACAACTAACCAAAG ATTTAGATGTAATCCAAGAGTAA
Protein sequence (LotjaGi1g1v0282500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSICLVKMFSCFGLLLFMLCFNVVTVELALGNDIDTDIANCPDLSCGNQVIRFPFRILDRHPTTCGYPGFDLSCSSKNNT EIELPHPVKLNVKNIDYRHQTIELSDPYGCLPKQLQYLAPSASQFQFQQGGYHFFNCSVTNKGSLLDYSYLVPCLNTLGS QVYAVPSSTLMEDLPLSFCTKMFNISYNPFDFQTDQDYILRLTWSKPNCQQCESKGRRCVWNNHAANNGIYCFSDHKGSS KALVTTGSVLGSLFFMLLTAAVYHVYDIYRLRKEKEAMFVKFLQDYRALKPTRYSYVEIKRITKNFEHKLGEGAFGTVFK GNISKEISIAVKILNISHGNGEEFINEVSTMGRIHHVNIVRMVGFCADGFNRALVYEFLPNGSLQKFINSPDNRQNFLGW KRLYEIALGIAKGIEYLYQGCNQRILHFDIKPQNVLLDHNFAPKICDFGLAKLCSRDQSIVSMTAARGTLGYIAPEVFSR NFGNVSDKSDVYSYGMMLLETIGGRKITEDMEENTSHVYYPEWIHNLLEEHEEMRIHIQEEGDSKIARKLAIVGLWCIQW YAMNRPSMQMVVQMLEGDVETAPIPPNPFTSSAGARPRRTIAIMGVAARQLTKDLDVIQE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 29 | 29 | - | – | |
| SignalP_EUK | 1 | 31 | 31 | - | – | |
| Phobius | 1 | 29 | 29 | - | – | |
| Phobius | 1 | 9 | 9 | - | – | |
| TMHMM | 9 | 31 | 23 | - | – | |
| Phobius | 10 | 21 | 12 | - | – | |
| Phobius | 22 | 29 | 8 | - | – | |
| Phobius | 30 | 241 | 212 | - | – | |
| PANTHER | 39 | 618 | 580 | 1.0E-225 | – | |
| PANTHER | 39 | 618 | 580 | 1.0E-225 | – | |
| Pfam | 40 | 113 | 74 | 3.0E-9 | ||
| Phobius | 242 | 266 | 25 | - | – | |
| Phobius | 267 | 620 | 354 | - | – | |
| Gene3D | 280 | 378 | 99 | 9.9E-25 | – | |
| SUPERFAMILY | 289 | 576 | 288 | 1.86E-70 | ||
| ProSiteProfiles | 304 | 590 | 287 | 35.679 | ||
| SMART | 304 | 547 | 244 | 4.2E-20 | ||
| Pfam | 307 | 573 | 267 | 5.3E-47 | ||
| ProSitePatterns | 310 | 332 | 23 | - | ||
| Gene3D | 379 | 582 | 204 | 1.7E-50 | – | |
| ProSitePatterns | 425 | 437 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. | ||
| Molecular function | Polysaccharide binding | Interacting selectively and non-covalently with any polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically. |
Expression pattern of LotjaGi1g1v0282500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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