Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0329100 |
| Transcript ID | LotjaGi1g1v0329100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peptidyl-prolyl cis-trans isomerase; TAIR: AT2G15790.1 peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase; Swiss-Prot: sp|Q9C566|CYP40_ARATH Peptidyl-prolyl cis-trans isomerase CYP40; TrEMBL-Plants: tr|I3SXT9|I3SXT9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0329100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:78423081..78428115) extracted from Lotus japonicus Gifu genome v1.2.
TCATCATTCAATACAACAGGACTAAGAACAAGAGACAAAAAGGTCATAAATTTGGAGGCGTTTGAATACGGAAGGTGGCA ATGACGTGAGAGAGAGAGAAAGAGAGATCACTCTCTAGTCTCTATTACTACTATTATTATTAATGTATAATCATTATTTG TAGTTTTATTAATATAATCACTAAATTTTTGTCCTTTTTGTCATTTTTCACACTATGTCTATATGAAACTCCAAGAGACA CTACTTCAGGTTCAGGGTCTAGAGAGAGAGAGAGAGAGATGGGAAGAACAAGGTGCTTCTTGGACATCAGCATAGGTGAA GAGCTTGAAGGAAGGATATTGGTGGAGCTTTTCAACGATGTTGTACCCAAAACTTGTGAGAATTTCAGAGCTCTCTGCAC TGGAGAAAAAGGCATTGGTCCAAACACTGGTGTGCCTCTCCATTTCAAGGTTAACCATCATCCTCTATTTTCACTTTTTT CACTTTTTGGTCATGCCCACCATCTATTTGTATTAAGTTCTCCTTTCAGCTACCAAAGTTGATTCCTTTATGCTTTTTTA GGTCTTTTATTTATGATGTGATTTCTGCCCAAATTCATGGATTCTGAAATGACTGGTGTTTTAATGAAAAGGGTGTTGTT TATTCTGTTACTGGCTTCGCTGTGCACTTTCAAAATGAAACCTTTGTATTTGGAGCATTGATTTTGTGTCTTGTTGCTTT ATTTCAATGATCATAGGATCTGGATTTTGTAGTAATCCAAAATGTCTGTAGATACCTTCATTCTGAAAAAGACAGTTATG CCCCCTTCATTCTTCTACTCTGTAGATACTTTTTTTTTTTGCTACAAGAGGAAAGCATCTGTAGATGCTTTTTGATCACT CACTTTTGTTATATACCCGTATTCTTGCCAAATAGATTGTACAACTTGTATCAATGTTACTACTAGGATTTCTGTATTTT TCAATGTAAAAGTAAAATTTCATACGTTATTTGTATTTGATACCGAGCTATCAATCACTATAGCCCGCCCGACCTAGAGG ATGGGGGACAAGAAGCATTACATGGCTTAGGAGGACAACATGGCCTAGTCATATATGTGGAAGCCTATGATCCAGAGAAA CTATAACCGCCAAAATTAAATAGTCGTCTATAACCCTCCAATTAATTGATATACCAATGATTGTGAAACATTCAATAACT CAAGATGCAACCTCAGACCTATTTAAAACTTAGGGGAACTAGAGTTCCAGCATACTCACTCTAATGCCATTCCTCGACCT GCTTGGTATTCTGATCAGCTGAGCTTGGGAGTTTGGAGAAAACAACTGCGAATTATAATATCCCCAGAAATATGGCAACT TTCTGATAGTCTAGAATTTGGTTTTTAAAATGTTAGAGTCTATTGTCTGAGAATATAATCCCAGCAATGCAGATGGGGAA GGAAAAAAAGAAGTTAACAACAGATATCAGTAGCAGGGAATATTATATAGTAGTAGTTTAAACTCTGTAATTCATGTCAT ACCATGAGTTGACATTAGCTTCCTTGTATAAGACGTGTTCTTTGTTTATCTTGATTAAAGCCTGAAACAATTAGGGAACT ATTCTTTTGGTTTCTATTCTAAACTTGCTGCTTAGTACTTTCCTGTGACATGTGATTAACTGGATAGAACTTTACTCAAG CATCTATTATTTTGCTGGCTCTGTCGTGCTATGTTTTTTTGGATGCAGCTCTGAATCTGTTGGCTTTGGTACTGAGTGCA GTTTAGCGTAACATCAAATGATTGCTAATTATCATGCATGCTTCCTGGGTTCATGATAATTATATATTTGGATATGGTGA TCAATAACTCTCATCTATACTCTATAGGAGCGCTTTTGAATACACTCTCAATGATTGGTCTATTATTTAAAATGCCGATA CACTTGTAATATGGAGATTAGGTCTCACGGTGTGAATACCAACTTGTTATTTTCTTTATGTTACTTCAAGGTTAACTATT GAATTCACTTTATAATCTGTTGTATTTTCAGGGATCTTGCTTTCATCGTGTTATTAAAGGCTTTATGATCCAAGGAGGCG ATATATCTGCTGGAGATGGTACAGGAGGAGAATCTATATATGGACTTAAGTTTGAAGATGAAAATTTTGAGATGAAGCAT GAAAGGAAAGGGATGTTATCAATGGCAAACTCTGGTCCTGATACAAATGGGTCTCAATTTTTTATTAGCACTACCCGAAC GTCTCATCTAGATGGTAAGCATGTTGTGTTTGGGAAAATAGTCAAAGGAATGGGAGTGGTCCGTTCAATTGAGCATGTTA CGATCGATGGAGACCGTCCCGTTGTTGATGTTAAAATTGTGGATTGTGGAGAAATTCCTGACGGAGAAGATGATGGGACA TCTAACTTTTTCAAAGATGGTGATACTTATCCTGATTGGCCAGCAGACCTTGATGAGAGCCCTGATGAACTGGACTGGTG GATGAAATCTGTTGACTCAATTAAATCTTTTGGCAATGAGCATTTCAAGGTATTGGTGCTTCCCCATAGTCTATCTCACC ATGATTTTGACATATTATTTAATACTTTGAAAGGAGCTATATTTTTCTGAGGAGAATAAAAGAAATATTCCTGTTCTGCC AATTAATAGTGGTTCAGTGCTCATTACTGCTGCAGTCATCCCATTAGCAAATAAAACTAATTATTTTTGTCTGATAGAAA CAAGACTACAAAATGGCTCTAAGGAAGTATCGTAAGGCTTTACGCTACCTGGATATTTGTTGGGAGAAAGACGACATTGA TGAAGGTATGCGGCAGCTTGTTAGTATTTATTTCATTTAACTTATTTACTGTGCAATAGTGATTATACTACAATTGCACT TGACTTAACATGGTGTATTAATGATGCATTTGCAGAGAAAAGTTCGAGTATGAGGAAAACTAAGTCTCAGGTTTTTACAA ACAGCTCTGTAAGTTGGAAGTTACTGTGTTGTATTATAGTGTTGCAGCTAACTTAACTTATGTTACCTTTGCTTTTATAT TCCTTCTGTCCTGTTGCCATTCTGCATATATTAACTTCTTTTTCTTTTTCCTACTCTACTATTATGTTATGTCCTATTTT CCAGGCTTGTAAGTTGAAATTGGGAGATCTTAAAGGAGCATTATTGGATACAGAATTTGCAATCCGTGACGGAGACAACA ATGCCAAAGCTTTGTTCCGGCAAGGGCAGGTTGGTATCACGATTGAAGAGCTTACTTTGGGCTTCTTGTTGCTGGTATTT AATGTATCCTCATTTTTTTTCTGATATCTACTTTACTTCCAATTTATCAGACATACATGGCACTCCATGACATTGATGCT GCAGTTGAAAGCTTTAAGAAGGCACTAACCTTGGAGCCTAATGATGGTAAATCGTCAATATATTTTGGATCAGGCGCTTG TCACACACTATCCTGTGCTATAATTGCTGGGATGTATTAACTTCATAATTTATTAGTCAGATTTGAGAGTCAGATCCCTT TATATATAGATATATAAATGCACAAACATGCATAAAAGATGGGATAGCCATTTTCATGATACAAGCTGAAAAATAATATA TGAATGGTAGTAATAACTTAAATATTAATATTAATTTGGATTGTGAAGAAATCTGAGAGTCTGGGATGGGCAGGAAGGTA ATTTGGAGAGATATTGAACTTAAGGGTAATTTGTGAAGAACTGAAAATAGTGTGCTTATGCATTGAACCTATAATGTATA GTTCTGCAAGTTCTTAATATAAAGCTTCCTGTATCTTACTTGATATCTTCCCATGTTCAGTTGGAATAAAAAAGGAACTC GCTGCTGTTAGGAAGAAGGTAATGTATCTATCTAAATTGAACTAAGCATTTCATCCTTATGTACTTTGCTGGGAACCTAA TTGATTGTTGTTGCAGATATCTGATAGACGCGATCTAGAGAAAAAAGCATTTAGCAAGATGTTCCAATAGCAAATGTTTA CTCTCAAGCTCTCTGTTACACAGATACAGGTAATGACTGTGTCTATGTGTAGGCATATACTTATTAGCTATTACTTTACA ATGAAACTGTATAAAGTTTAATAGGTCAGCTATATTTATGCATCATTTTAGATTGATTTTCACTTTTCAATCATTTAAAG TTTTAAACTCTCCACTTTTGTTGACATGTGCTTCTTTGTATTTCCTCCTTTTCAGGTTTTATGTAAAAGGTTGAGGCTTG AACCCATTGTACTAAAATTCTTACAAATGAGGTTCAGATGATTCTAATTTACGTTTTGTTACGTGATGAAATTTTTAGCC AACAATTTTGTCAACTTCAAATTTTACCACGAACTCTCGAATCATTCTATTTTGTGGTGATTCTAGTGATTGAAATGCAG CTCAGATGTTGGACAACAGACAGTGCTGTGTGTGATTTTGATACTTATTATTTTGAACTTACACTCAGTTTATTTCTTAC AACCCAAATAACCACTCAGTGTGGTTGCAAGTTTAATTTCAAGACTTGGCTACTTGAAGCTGACTGTTAATCCCCAACTG TAGTATATTTGCTTCCTTTTTCGTAAAAATTCTGTTTTTTTTTTTTGTGTGTGTGTGTGTATATTTGCTTCCTAAAACAT TTTCTGACATGTATCAACTATAAACCAAAAGCACAGCTCATGACCAAAAATCTTAAAGCATTTACTTTACGTAAATTACT GAGTTTAGAAAGTATTAGCATATAGCGTATTAGCTAGTCATAAATTGATGGCTCTTCCAAAGGCAAGAATATGCTAGTCA CAACAACTAATGACATGCAAGAAACTTGTTTAGTTGTTAAGCAATGAACATTTGGGCTGAACAAACCTCTTCCTTTAGAA AGGTTAAGCTCCAATTTACAATAATTCAATCTTCTTACATTTGACCTCTCCATTACCCAAATCAAACCATTTACTAGCTT GAAGTAAGATCTTATTATTTCTGATGTGAGATTCCCATAATATTGGAGTGTACCAGCCAATGTCCAAGAGGACAC
CDS sequence (LotjaGi1g1v0329100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAAGAACAAGGTGCTTCTTGGACATCAGCATAGGTGAAGAGCTTGAAGGAAGGATATTGGTGGAGCTTTTCAACGA TGTTGTACCCAAAACTTGTGAGAATTTCAGAGCTCTCTGCACTGGAGAAAAAGGCATTGGTCCAAACACTGGTGTGCCTC TCCATTTCAAGGGATCTTGCTTTCATCGTGTTATTAAAGGCTTTATGATCCAAGGAGGCGATATATCTGCTGGAGATGGT ACAGGAGGAGAATCTATATATGGACTTAAGTTTGAAGATGAAAATTTTGAGATGAAGCATGAAAGGAAAGGGATGTTATC AATGGCAAACTCTGGTCCTGATACAAATGGGTCTCAATTTTTTATTAGCACTACCCGAACGTCTCATCTAGATGGTAAGC ATGTTGTGTTTGGGAAAATAGTCAAAGGAATGGGAGTGGTCCGTTCAATTGAGCATGTTACGATCGATGGAGACCGTCCC GTTGTTGATGTTAAAATTGTGGATTGTGGAGAAATTCCTGACGGAGAAGATGATGGGACATCTAACTTTTTCAAAGATGG TGATACTTATCCTGATTGGCCAGCAGACCTTGATGAGAGCCCTGATGAACTGGACTGGTGGATGAAATCTGTTGACTCAA TTAAATCTTTTGGCAATGAGCATTTCAAGAAACAAGACTACAAAATGGCTCTAAGGAAGTATCGTAAGGCTTTACGCTAC CTGGATATTTGTTGGGAGAAAGACGACATTGATGAAGAGAAAAGTTCGAGTATGAGGAAAACTAAGTCTCAGGTTTTTAC AAACAGCTCTGCTTGTAAGTTGAAATTGGGAGATCTTAAAGGAGCATTATTGGATACAGAATTTGCAATCCGTGACGGAG ACAACAATGCCAAAGCTTTGTTCCGGCAAGGGCAGACATACATGGCACTCCATGACATTGATGCTGCAGTTGAAAGCTTT AAGAAGGCACTAACCTTGGAGCCTAATGATGTTGGAATAAAAAAGGAACTCGCTGCTGTTAGGAAGAAGATATCTGATAG ACGCGATCTAGAGAAAAAAGCATTTAGCAAGATGTTCCAATAG
Protein sequence (LotjaGi1g1v0329100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGRTRCFLDISIGEELEGRILVELFNDVVPKTCENFRALCTGEKGIGPNTGVPLHFKGSCFHRVIKGFMIQGGDISAGDG TGGESIYGLKFEDENFEMKHERKGMLSMANSGPDTNGSQFFISTTRTSHLDGKHVVFGKIVKGMGVVRSIEHVTIDGDRP VVDVKIVDCGEIPDGEDDGTSNFFKDGDTYPDWPADLDESPDELDWWMKSVDSIKSFGNEHFKKQDYKMALRKYRKALRY LDICWEKDDIDEEKSSSMRKTKSQVFTNSSACKLKLGDLKGALLDTEFAIRDGDNNAKALFRQGQTYMALHDIDAAVESF KKALTLEPNDVGIKKELAAVRKKISDRRDLEKKAFSKMFQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 360 | 360 | 4.5E-188 | – | |
| Gene3D | 1 | 172 | 172 | 1.3E-82 | ||
| PANTHER | 1 | 360 | 360 | 4.5E-188 | – | |
| SUPERFAMILY | 3 | 177 | 175 | 1.21E-73 | ||
| CDD | 5 | 170 | 166 | 5.87909E-101 | – | |
| ProSiteProfiles | 7 | 171 | 165 | 43.42 | ||
| Pfam | 8 | 170 | 163 | 8.8E-50 | ||
| PRINTS | 24 | 39 | 16 | 1.2E-36 | ||
| ProSitePatterns | 56 | 73 | 18 | - | ||
| PRINTS | 61 | 73 | 13 | 1.2E-36 | ||
| PRINTS | 104 | 119 | 16 | 1.2E-36 | ||
| PRINTS | 119 | 131 | 13 | 1.2E-36 | ||
| PRINTS | 132 | 147 | 16 | 1.2E-36 | ||
| Gene3D | 207 | 360 | 154 | 9.0E-40 | ||
| SUPERFAMILY | 208 | 355 | 148 | 4.38E-27 | ||
| ProSiteProfiles | 211 | 244 | 34 | 6.844 | ||
| SMART | 211 | 244 | 34 | 2.9 | ||
| ProSiteProfiles | 211 | 244 | 34 | 6.802 | ||
| ProSiteProfiles | 263 | 330 | 68 | 15.796 | ||
| ProSiteProfiles | 297 | 330 | 34 | 13.806 | ||
| SMART | 297 | 330 | 34 | 1.3E-7 | ||
| Pfam | 297 | 330 | 34 | 3.4E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Protein peptidyl-prolyl isomerization | The modification of a protein by cis-trans isomerization of a proline residue. | ||
| Molecular function | Peptidyl-prolyl cis-trans isomerase activity | Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0). | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. |
Expression pattern of LotjaGi1g1v0329100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…