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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0376500 |
| Transcript ID | LotjaGi1g1v0376500.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pentatricopeptide repeat-containing protein, putative; TAIR: AT4G31850.1 proton gradient regulation 3; Swiss-Prot: sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850, chloroplastic; TrEMBL-Plants: tr|A0A0B2PH40|A0A0B2PH40_GLYSO Pentatricopeptide repeat-containing protein, chloroplastic; Found in the gene: LotjaGi1g1v0376500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:85544355..85551111) extracted from Lotus japonicus Gifu genome v1.2.
GAAAAATGTCCAAAATGGGACATGGTGGGTTGGCAGCAAAATTATCCAAAATCAAAACTTGATGATAGCGTTGGCCGTAT CTGTGTCTCTCATTAGCGATTACACTATCCATCTTCGCTCACTCTAACACTCTTTTACGTACGGACACAGACACAGGTTA GCACATTCGATTTGCTATCTTCTGCAGTTCAATGTGGTTATTCTAAATTTCAGTCGCTACTTTTGTTCATCATTGCTGCA TTTTTTTGCGTTTCAATGACCGTCTTAGTTCTCTGCTCCTCAACCGCTTGTTGTAGCAGCAGCAGCAGCAGTATGTCATC TTGTTACGCTTTGGCTGATACTAATTTCTCTGTTCTAAGCAATAATGGGTTCTTAGGAGGGAAGAATTTTGTCAAAATGA AGAATTTATCAAAAGGGTGTTGTTTAAAATGGAAGAAAAATGGAAGAAGACAAATGGGTCATCGTGGTTTTAGGCTAAGA TGTGCCCATGAGGTTGTTGTGGTGAATGGCAGCAAGAGCAAAATAAGTGTGTCACCTGAGGAAGTTATTGGCGTTTTGAA GTCTATTTCGGATCCGAGTTCGAGTCTTTCGTACTTGAAATCGGTTGCCCAGTTGCCGAGTCTTGTGCTCACGACTGACG CGTGCAATTACATGCTTGAGTTATTGGGGGCTCACAGGAGGGTTGAGGATATGGTTGTTGTTTTTAATTTGATGCAAAAG CATGTTATTTACAGGAATTTGAATACCTACCTGACTATTTTCAAGGCTCTCTCAGTTAAAGGTGGGATTCGACAGGCACC GTTTGCGCTTGGAAGGATGAGGCAAGCTGGGTTTGTGTTGAATGCGTATTCATATAATGGACTGATTCATTTGGTAGTCC AACCTGGCTTCTGTATTGAGGCTTTGAAGGTTTACAGAAGAATGATCTCAGAAGGGATGAAGCCTAGCATGAAGACGTAC TCAGCATTAATGGTGGCATTGGGGAGGAGAAGGGAAACTGGAATCGTTATGAGTTTATTGGAAGAGATGGAAACTTTGGG TTTGAAGCCAAATATCTACACATATACCATATGCATTAGAGTGCTTGGGAGGGCAGGGAGAATTGATGATGCTTGTGGGA TTTTGAAGAAAATGGATAATGAAGGATGCGGGCCTGATGTTGTCACTTATACGGTTCTAATTGATGCTCTTTGTACTGCA GGGAAACTTGATAAGGCCAAGGAGTTATATATAAAGATGAGAGGTAGCAGTCACAAACCTGACCGGGTAACATATATTAC TTTGATGGACAAGTTTAGTAACTGTGGCGACTTGGAGATGGTGAAAAAATTCTGGAGTGAGATGGAGGCTGATGGTTATG CTCCTGATGTGGTTACCTACACTATACTTGTTGAGGCTTTATGCAAGTCCGGGAATGTTGATCATGCATTTGCTATGTTA GACGTGATGAGAACAAAAGGGATTTTTCCAAATCTTCATACGTACAACACATTGATCTCTGGACTTTTGAAGTTGAGAAG ATTAGATGAGGCATTAGAACTCTTTGAAAATATGGAATCTTTGGGTGTTGGACCTACTGCTTATTCGTATGTTCTTTTCA TCGACTATTATGGAAAGTCTGGTGATACTGGAAAAGCTCTTGGCACCTTTGAAAAAATGAAAAGAAGAGGCATTGTGCCT AGTATAGTAGCGTGTAATGCATCTTTATATACTCTTGCAGAAATGGGTAGGATCAGAGAAGCAAAAGATATATTCAATGA TCTTCACAATTGTGGGCTTTCACCAGATTCAGTAACCTATAATATGATGATGAAGTGCTACAGCAAAGCAGGGCAAATAG ACAAAGCAATCGGGCTTTTGGCTGAGATGATGAGCAATGGGTATGAACCAGATGTTATTATAGTTAATTCTTTAATTGAC ACACTTTACAAGGATGATCGAGTTGATGAGGCGTGGCAAATGTTCCGAAGACTGGAGGATTTGAAGCTAGCTCCTACAGT TGTGACATACAACATTTTACTTACCGGTTTGGGGAAGGAGGGGAAAATCCCAAAGGCCCTTGAATTATTTGGGAGTATGT CAGTGTCTGGGTGCCCTCCAAACACCGTAACATTTAACGCACTCCTTGATTGTCTTTGCAAGAATGATGCAGTTGATTTG GCCTTGAAGATGTTCTGTAGAATGACAGCGATGAACTGTAGTCCTGATGTTCTGACATATAACACTGTTATCCATGGCTT GATCAAAGAAGGCAGAACTGATTATGCATTCTGGTTTTTCCATCAAATGAAGAAATTTCTCGCCCCTGATCATGTAACTT TGTGCACCCTCCTTCCCGGTATTGTGAGGTATGGAAGGGTTGAGGATGCAATCAAGATTGTTGTAGAATTTGTCCATCAG GCAGGTTCACATACAGACAAACAATTCTGGGGAGAGTTGATAGAATGTATTTTAGTTGAAGCAAAAATTGAAGAGGCCAT TGCATTTGCTGAAAGATTGGTGTTCGATGCTAGTTGCCAAGATGACCATGTAATGTTACCTCTAATCAGAGTTCTGTGTA AGCGGAAGAAGGCCCTTGATGCTCAAAATTTATTTGACAAATTCACCAAAACTTTAGGAGTTCACCCAACCCTGGAATCA TATAATTGCTTGATGGATGGGCTTCTTGCATGCAATGTCACTGAAAAGGCTTTAGAACTTTTTGTGGAGATGAAGAATGC TGGTTGTCACCCAAACATCTTCACTTACAACTTGTTGCTTGATGCTCATGGTAAATCTAGGAGGATTGCTGAACTTTTTG AATTGTACAATGAGATGCTGTGTAGGGGATGCAAGCCTAATGCTGTAACTCAAAATATTATCATCTCTGCCCTTGTGAAA TCTAATAGCCTAAATAAGGCATTAGATTTATATTATGAACTCATTAGTGGTGATTTCTCTCCCACTCCCTGCACATATGG CCCTCTTATAGATGGTCTTTTAAAGGCTGAAAGATGTGATGAAGCACTGAAGTTTTTTGAGGAGATGTTGGACTATCAAT GCAAGCCCAACTCTGCTATTTACAATATTCTCATCAATGGATTTGGGAAAGCAGGTAAAATTGATATTGCTTGTGATTTT TTCAAAAGGATGGTTAAGGAAGGAATAAGGCCAGACTTGAAATCCTACACCATTCTTGTAGAATGCCTGTGCATGACTGG TAGAGTTGATGAAGCTGTGCACTACTTTGAGGAACTAAAGTTAACTGGCCTTGATCCTGATACAGTTTCTTACAATCTTA TGATCAATGGGCTTGGAAAATCACGTCGGTTGGAGGAAGCTCTTTCTCTTTTCAGTGAAATGAAGAATAAGGGAATTTCT CCCGATCTTTATACTTATAATGCATTGATTCTCCATCTTGGAATTGCTGGAATGATAGACCAAGCTGGAAAAATGTATGA GGAACTGCAACTGGTGGGTCTTGAACCTAATGTCTTCACTTATAATGCTCTCATTCGCGGTCACAGTATGTCTGGAAATA AAGACCAAGCCTTTTCTGTATTCAAGAACATGATGGTTGGGGGGTTTAGCCCCAATGCGGAAACATATGCTCAACTGCCT AATAAAGGTTGATTCTGCTGAGTTATCTCATGGGGTCATTTCTTATTTCTTGTTTCAGTCTCTGATCTCAAAAGGGAGGC ATGAAGGTAATTCTTAATGTTTTACTAAAAATAATTTTATGGAAGTCTACTTAATTTTACTTGATAATTATTTTATTATC TTTTGATCGTTGTTGTTTCTTCAGGGACACTTGGCCCTGTTGCCTACACAATGTCAGAGACTGGAGATGTATTTAATGAC CAACACACATTGTGAGTATATCGGGTGTTAAATATATTTTATGGTTCCTTGACAATTTGTTTTTTTCAATTCTTAGTCTT TTTTTTTTGCTGATTGCAGGCGTCAGCAGCTCCCTACTATACAGATGGAGCCTTTACCTCCCTAGGGATATAGAAAGGAG GTGGGAATGTACATGGGAGAAGGATTAAAAAAGAAATGGTGTGATGGGATCACACCAAGATATCAAACCAATAATGTGTA AAATATATGAGCATACTTTAGGCGATGGCTAATGTACCTTTGGAAATAGGCCATGTACGGATACCATAAATTTTTACTGG TTATCAGAAGGTATGCAGAAGTGTACTTATGAGTTCTGTTGTTCATATAATCAAGTTTTATTACAATTTTTTTTCCTCCT GATTTTTGCGGCTTTGAAGTTTCAAGTAAGATGCTTTCTTTGCAATATCAAATGTATTTTTTGTTGTGCTGTTCTGATTG TTGTTACATTTTAATAATACCATTTCTCTAGCATTTCAATTCATTGGCTGTACAAAGAAGTTGCTTTTCTTTTCTTTTGT TTTCTTTTCCAAAAGTATGAGAGTTAAGAGTGTGAATGAGATCCTCTTCTTTACCTGCAGGGACTTCTGAGAAAAATATG ATCATGAGATGAAATGAAATCTAGTCTTGAAAACATGAGTTGTCTCTCTATATAACTTTTAGCTAATGCATCATTTGTCA ACTGATTTTTACGGTTCCAGCCCCTTGATCAACATATGCTATTTGCTATATACTCACTTCTTAGCATATAGCTTTTCCAT TTTTCCACGATCAAGCAATTGCTTAGAAACACTGCCCATTTCAGAAACCTTTGTGTATTCCAGAAACCTTGCCTTCAGGA AGGTGGGTGGCTGAGATCAAAGACTCCTCTCAGCATGTAGGGTTATGGCTGGGAACCTTTGACACACCAGAAGAGGCAGC AAGGGCTTATGATGAAGCAGCTAGAACCAACTTTGCATCACCAGAAAACCAACAAAACCAGGCTCTGATGATGCCCTTTC GTATGATGGAAAGCATAGTGGGTTAAGCTTTGCTTCCTTGAAAGCCAAGTTAAGCAGAAATCTGCAGAGCATCAAGGACA GGGTCAGTGATTGCAACTCATCAAAGAGCAGGGTTAGTCACCGTCTCACTTTGCTAGTAATTCCCCTGCCCTATCACATC ACTATAGATTCATCTAAATTAGAAACAAGTGGTCATTGGTGTGTAACTGTGTGTCTGTGATCTCTGGTTTTTAAACATTG AAAGACAAGCCATTTTTTCTCCATTTTGTCAGTCTGTTTCAATTTTAGTTGGTATAATCCATATTGTTGATTATCATCTG ACAAGATTGATGATTGCCCATTATTTGATTGATTGTCTGATACACCAAGCTGACTGACCTTTTCATAAATTAGATACTCT AATTTTATAATATTTTATTTCTCTAAGCTCCATGGCTAAAGTATTTACATTTTGCTCATCCCTTTGAGTTTGACTACTTC TGCTAGACTAATATGAATGTGAAGCCTTTGTGCAGCTTGGTACCAGGGATCACCGTTTGGCTTGTTCCCTGTGTGAGATT TTGTTCCATTGCAAACTCATTAGCTGCTTCACGGGAGTGCCATTTTCTCGCTGTCTTCAACTTTGGGGACTCCAATTTTG ACGCCGGAGGCCCAGTATGCAAAAAGCCACGAGATGCACCAGCTGTGATCAAGTGGCACATATCTACTCTTTGTGATGCA TCATCTGTGATTAAGTATGTAAAAAGCCATAAGAAGTCTACAGCCAGCATCAAATTTCAGCAAACATTTTTTGCAATGAA GTTAGCACTAAGTGCTGCTTAATACACTTCACGAGGTCCTTCATTCCTAAATCCTGACATGATGGTACCTGGTTATGGAG TTCTTGCCTAACTACGATCTTATGTCCGGAACATCCATGGCATTCCCTCATGCTTCTGATGTGATTGTTCTTCTGAAGGC TGCACACCATGAATGGAGACCAAACAATATAGGGTTCTGCACTAGTAATCATAGCTAGTCTTTTGGATAGTTCTCAAAAT CCAATTTGGAGCTATAGGAATATTCTGAAGGTTTGTTATTTTGAAGCCTTTTGATGATGAAGGTTGGCAATGGTTCCGTG CTCCAGAAGAAACTTGGTAGAGGAGCCAGACTGTATGGAAGAATACAAAGTCGGATGACAACTACAACCGCGAGAGCAAG ACAATGGAAGGACGCACTGCAGATTTCAAAACAGGTGTGGGTAGAGGTGGGAGGATGCATTGATGCTTACAGATCACAAT GGGGCATTAGGATTCAGTTTTAATTTTAATTTTTGAATTTTAATTCAAATTAATGATGTGGCAAAATACTGTAATATACA AGGATGACAGTGTAAAGAGCATTGCATAACACTTAAGCTCTTAGAAAAAAAACTAGTTATGTATGTTTTACTATGCTTTT TCTGTATAGTTGCATATTTTCATCGCATTACCATAAAACTACGGAAGGTATGTAATTTAATGCCAGAGATCATATCACAA AATTGGTACTTTTTGTGTGTGATCAGAGTAACTGTTCTGGTATAATGTTCGATGAACGGAAAATGGCCATTTAGATGTAT TATAAGCACTGAGTGGTGCACATTATACATATGTATGTGTATACGTATATGTAAGATACATATTTTCACTGTTGCTGCGG AGTGCACATTAAATTGAACTTCTTTCTGGTTTTGGTTCAGATTCAGGTGATGAGGATTGCTCTTGTGCTGGTGCACTGGA CTGTGGTCTTTTGAACTGCACCAAGATCATGGTCATGTTATCACATCCCTCGCCAGTAGCAGTTGATGGTGCTAAACACC GGTCAAGCACTCTTTCACACACTGCTGAAAGTTTCGT
CDS sequence (LotjaGi1g1v0376500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACCGTCTTAGTTCTCTGCTCCTCAACCGCTTGTTGTAGCAGCAGCAGCAGCAGTATGTCATCTTGTTACGCTTTGGC TGATACTAATTTCTCTGTTCTAAGCAATAATGGGTTCTTAGGAGGGAAGAATTTTGTCAAAATGAAGAATTTATCAAAAG GGTGTTGTTTAAAATGGAAGAAAAATGGAAGAAGACAAATGGGTCATCGTGGTTTTAGGCTAAGATGTGCCCATGAGGTT GTTGTGGTGAATGGCAGCAAGAGCAAAATAAGTGTGTCACCTGAGGAAGTTATTGGCGTTTTGAAGTCTATTTCGGATCC GAGTTCGAGTCTTTCGTACTTGAAATCGGTTGCCCAGTTGCCGAGTCTTGTGCTCACGACTGACGCGTGCAATTACATGC TTGAGTTATTGGGGGCTCACAGGAGGGTTGAGGATATGGTTGTTGTTTTTAATTTGATGCAAAAGCATGTTATTTACAGG AATTTGAATACCTACCTGACTATTTTCAAGGCTCTCTCAGTTAAAGGTGGGATTCGACAGGCACCGTTTGCGCTTGGAAG GATGAGGCAAGCTGGGTTTGTGTTGAATGCGTATTCATATAATGGACTGATTCATTTGGTAGTCCAACCTGGCTTCTGTA TTGAGGCTTTGAAGGTTTACAGAAGAATGATCTCAGAAGGGATGAAGCCTAGCATGAAGACGTACTCAGCATTAATGGTG GCATTGGGGAGGAGAAGGGAAACTGGAATCGTTATGAGTTTATTGGAAGAGATGGAAACTTTGGGTTTGAAGCCAAATAT CTACACATATACCATATGCATTAGAGTGCTTGGGAGGGCAGGGAGAATTGATGATGCTTGTGGGATTTTGAAGAAAATGG ATAATGAAGGATGCGGGCCTGATGTTGTCACTTATACGGTTCTAATTGATGCTCTTTGTACTGCAGGGAAACTTGATAAG GCCAAGGAGTTATATATAAAGATGAGAGGTAGCAGTCACAAACCTGACCGGGTAACATATATTACTTTGATGGACAAGTT TAGTAACTGTGGCGACTTGGAGATGGTGAAAAAATTCTGGAGTGAGATGGAGGCTGATGGTTATGCTCCTGATGTGGTTA CCTACACTATACTTGTTGAGGCTTTATGCAAGTCCGGGAATGTTGATCATGCATTTGCTATGTTAGACGTGATGAGAACA AAAGGGATTTTTCCAAATCTTCATACGTACAACACATTGATCTCTGGACTTTTGAAGTTGAGAAGATTAGATGAGGCATT AGAACTCTTTGAAAATATGGAATCTTTGGGTGTTGGACCTACTGCTTATTCGTATGTTCTTTTCATCGACTATTATGGAA AGTCTGGTGATACTGGAAAAGCTCTTGGCACCTTTGAAAAAATGAAAAGAAGAGGCATTGTGCCTAGTATAGTAGCGTGT AATGCATCTTTATATACTCTTGCAGAAATGGGTAGGATCAGAGAAGCAAAAGATATATTCAATGATCTTCACAATTGTGG GCTTTCACCAGATTCAGTAACCTATAATATGATGATGAAGTGCTACAGCAAAGCAGGGCAAATAGACAAAGCAATCGGGC TTTTGGCTGAGATGATGAGCAATGGGTATGAACCAGATGTTATTATAGTTAATTCTTTAATTGACACACTTTACAAGGAT GATCGAGTTGATGAGGCGTGGCAAATGTTCCGAAGACTGGAGGATTTGAAGCTAGCTCCTACAGTTGTGACATACAACAT TTTACTTACCGGTTTGGGGAAGGAGGGGAAAATCCCAAAGGCCCTTGAATTATTTGGGAGTATGTCAGTGTCTGGGTGCC CTCCAAACACCGTAACATTTAACGCACTCCTTGATTGTCTTTGCAAGAATGATGCAGTTGATTTGGCCTTGAAGATGTTC TGTAGAATGACAGCGATGAACTGTAGTCCTGATGTTCTGACATATAACACTGTTATCCATGGCTTGATCAAAGAAGGCAG AACTGATTATGCATTCTGGTTTTTCCATCAAATGAAGAAATTTCTCGCCCCTGATCATGTAACTTTGTGCACCCTCCTTC CCGGTATTGTGAGGTATGGAAGGGTTGAGGATGCAATCAAGATTGTTGTAGAATTTGTCCATCAGGCAGGTTCACATACA GACAAACAATTCTGGGGAGAGTTGATAGAATGTATTTTAGTTGAAGCAAAAATTGAAGAGGCCATTGCATTTGCTGAAAG ATTGGTGTTCGATGCTAGTTGCCAAGATGACCATGTAATGTTACCTCTAATCAGAGTTCTGTGTAAGCGGAAGAAGGCCC TTGATGCTCAAAATTTATTTGACAAATTCACCAAAACTTTAGGAGTTCACCCAACCCTGGAATCATATAATTGCTTGATG GATGGGCTTCTTGCATGCAATGTCACTGAAAAGGCTTTAGAACTTTTTGTGGAGATGAAGAATGCTGGTTGTCACCCAAA CATCTTCACTTACAACTTGTTGCTTGATGCTCATGGTAAATCTAGGAGGATTGCTGAACTTTTTGAATTGTACAATGAGA TGCTGTGTAGGGGATGCAAGCCTAATGCTGTAACTCAAAATATTATCATCTCTGCCCTTGTGAAATCTAATAGCCTAAAT AAGGCATTAGATTTATATTATGAACTCATTAGTGGTGATTTCTCTCCCACTCCCTGCACATATGGCCCTCTTATAGATGG TCTTTTAAAGGCTGAAAGATGTGATGAAGCACTGAAGTTTTTTGAGGAGATGTTGGACTATCAATGCAAGCCCAACTCTG CTATTTACAATATTCTCATCAATGGATTTGGGAAAGCAGGTAAAATTGATATTGCTTGTGATTTTTTCAAAAGGATGGTT AAGGAAGGAATAAGGCCAGACTTGAAATCCTACACCATTCTTGTAGAATGCCTGTGCATGACTGGTAGAGTTGATGAAGC TGTGCACTACTTTGAGGAACTAAAGTTAACTGGCCTTGATCCTGATACAGTTTCTTACAATCTTATGATCAATGGGCTTG GAAAATCACGTCGGTTGGAGGAAGCTCTTTCTCTTTTCAGTGAAATGAAGAATAAGGGAATTTCTCCCGATCTTTATACT TATAATGCATTGATTCTCCATCTTGGAATTGCTGGAATGATAGACCAAGCTGGAAAAATGTATGAGGAACTGCAACTGGT GGGTCTTGAACCTAATGTCTTCACTTATAATGCTCTCATTCGCGGTCACAGTATGTCTGGAAATAAAGACCAAGCCTTTT CTGTATTCAAGAACATGATGGTTGGGGGGTTTAGCCCCAATGCGGAAACATATGCTCAACTGCCTAATAAAGGTTGA
Protein sequence (LotjaGi1g1v0376500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTVLVLCSSTACCSSSSSSMSSCYALADTNFSVLSNNGFLGGKNFVKMKNLSKGCCLKWKKNGRRQMGHRGFRLRCAHEV VVVNGSKSKISVSPEEVIGVLKSISDPSSSLSYLKSVAQLPSLVLTTDACNYMLELLGAHRRVEDMVVVFNLMQKHVIYR NLNTYLTIFKALSVKGGIRQAPFALGRMRQAGFVLNAYSYNGLIHLVVQPGFCIEALKVYRRMISEGMKPSMKTYSALMV ALGRRRETGIVMSLLEEMETLGLKPNIYTYTICIRVLGRAGRIDDACGILKKMDNEGCGPDVVTYTVLIDALCTAGKLDK AKELYIKMRGSSHKPDRVTYITLMDKFSNCGDLEMVKKFWSEMEADGYAPDVVTYTILVEALCKSGNVDHAFAMLDVMRT KGIFPNLHTYNTLISGLLKLRRLDEALELFENMESLGVGPTAYSYVLFIDYYGKSGDTGKALGTFEKMKRRGIVPSIVAC NASLYTLAEMGRIREAKDIFNDLHNCGLSPDSVTYNMMMKCYSKAGQIDKAIGLLAEMMSNGYEPDVIIVNSLIDTLYKD DRVDEAWQMFRRLEDLKLAPTVVTYNILLTGLGKEGKIPKALELFGSMSVSGCPPNTVTFNALLDCLCKNDAVDLALKMF CRMTAMNCSPDVLTYNTVIHGLIKEGRTDYAFWFFHQMKKFLAPDHVTLCTLLPGIVRYGRVEDAIKIVVEFVHQAGSHT DKQFWGELIECILVEAKIEEAIAFAERLVFDASCQDDHVMLPLIRVLCKRKKALDAQNLFDKFTKTLGVHPTLESYNCLM DGLLACNVTEKALELFVEMKNAGCHPNIFTYNLLLDAHGKSRRIAELFELYNEMLCRGCKPNAVTQNIIISALVKSNSLN KALDLYYELISGDFSPTPCTYGPLIDGLLKAERCDEALKFFEEMLDYQCKPNSAIYNILINGFGKAGKIDIACDFFKRMV KEGIRPDLKSYTILVECLCMTGRVDEAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNKGISPDLYT YNALILHLGIAGMIDQAGKMYEELQLVGLEPNVFTYNALIRGHSMSGNKDQAFSVFKNMMVGGFSPNAETYAQLPNKG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 15 | 15 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 27 | 27 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 27 | 27 | - | – | |
| Phobius | 1 | 2 | 2 | - | – | |
| Phobius | 1 | 25 | 25 | - | – | |
| Phobius | 3 | 13 | 11 | - | – | |
| Phobius | 14 | 25 | 12 | - | – | |
| Phobius | 26 | 1118 | 1093 | - | – | |
| PANTHER | 100 | 245 | 146 | 3.1E-221 | – | |
| ProSiteProfiles | 126 | 156 | 31 | 6.347 | ||
| ProSiteProfiles | 161 | 195 | 35 | 6.928 | ||
| Pfam | 188 | 244 | 57 | 9.8E-7 | ||
| ProSiteProfiles | 196 | 230 | 35 | 10.457 | ||
| Gene3D | 213 | 331 | 119 | 5.3E-32 | ||
| ProSiteProfiles | 231 | 265 | 35 | 9.558 | ||
| TIGRFAM | 234 | 267 | 34 | 0.001 | ||
| PANTHER | 251 | 384 | 134 | 3.1E-221 | – | |
| Pfam | 262 | 293 | 32 | 9.1E-7 | ||
| ProSiteProfiles | 266 | 300 | 35 | 11.213 | ||
| TIGRFAM | 268 | 302 | 35 | 2.4E-8 | ||
| Pfam | 300 | 347 | 48 | 1.0E-12 | ||
| ProSiteProfiles | 301 | 335 | 35 | 12.627 | ||
| TIGRFAM | 303 | 336 | 34 | 1.1E-7 | ||
| Gene3D | 332 | 435 | 104 | 4.5E-30 | ||
| ProSiteProfiles | 336 | 370 | 35 | 10.928 | ||
| TIGRFAM | 338 | 372 | 35 | 8.4E-5 | ||
| PANTHER | 367 | 574 | 208 | 3.1E-221 | – | |
| Pfam | 370 | 419 | 50 | 5.9E-15 | ||
| ProSiteProfiles | 371 | 405 | 35 | 12.891 | ||
| TIGRFAM | 373 | 406 | 34 | 1.2E-8 | ||
| ProSiteProfiles | 406 | 440 | 35 | 13.482 | ||
| TIGRFAM | 408 | 441 | 34 | 3.6E-9 | ||
| SUPERFAMILY | 417 | 649 | 233 | 2.88E-9 | – | |
| Gene3D | 436 | 504 | 69 | 1.2E-11 | ||
| ProSiteProfiles | 441 | 475 | 35 | 11.027 | ||
| TIGRFAM | 443 | 476 | 34 | 7.3E-7 | ||
| Pfam | 444 | 473 | 30 | 2.6E-4 | ||
| ProSiteProfiles | 476 | 510 | 35 | 9.131 | ||
| TIGRFAM | 479 | 512 | 34 | 0.0017 | ||
| Gene3D | 505 | 574 | 70 | 5.1E-19 | ||
| Pfam | 510 | 547 | 38 | 1.3E-9 | ||
| ProSiteProfiles | 511 | 545 | 35 | 13.954 | ||
| TIGRFAM | 513 | 547 | 35 | 8.5E-12 | ||
| ProSiteProfiles | 546 | 580 | 35 | 10.052 | ||
| TIGRFAM | 550 | 581 | 32 | 0.0012 | ||
| Pfam | 550 | 575 | 26 | 0.11 | ||
| PANTHER | 568 | 742 | 175 | 3.1E-221 | – | |
| Gene3D | 575 | 643 | 69 | 1.6E-20 | ||
| Pfam | 580 | 629 | 50 | 1.9E-15 | ||
| ProSiteProfiles | 581 | 615 | 35 | 12.364 | ||
| TIGRFAM | 583 | 617 | 35 | 3.4E-9 | ||
| ProSiteProfiles | 616 | 650 | 35 | 11.805 | ||
| TIGRFAM | 618 | 652 | 35 | 5.9E-8 | ||
| Gene3D | 644 | 716 | 73 | 2.7E-15 | ||
| Pfam | 646 | 679 | 34 | 3.8E-9 | ||
| ProSiteProfiles | 651 | 681 | 31 | 10.435 | ||
| TIGRFAM | 654 | 680 | 27 | 2.1E-4 | ||
| ProSiteProfiles | 685 | 720 | 36 | 6.675 | ||
| Gene3D | 751 | 876 | 126 | 9.8E-33 | ||
| ProSiteProfiles | 756 | 791 | 36 | 6.665 | ||
| PANTHER | 762 | 919 | 158 | 3.1E-221 | – | |
| SUPERFAMILY | 776 | 992 | 217 | 2.88E-8 | – | |
| ProSiteProfiles | 792 | 826 | 35 | 11.115 | ||
| TIGRFAM | 795 | 828 | 34 | 4.7E-8 | ||
| Pfam | 795 | 824 | 30 | 1.1E-4 | ||
| Pfam | 826 | 875 | 50 | 2.2E-13 | ||
| ProSiteProfiles | 827 | 861 | 35 | 12.189 | ||
| TIGRFAM | 829 | 863 | 35 | 9.3E-9 | ||
| ProSiteProfiles | 862 | 896 | 35 | 9.46 | ||
| TIGRFAM | 864 | 897 | 34 | 3.5E-5 | ||
| Gene3D | 877 | 996 | 120 | 1.1E-32 | ||
| PANTHER | 894 | 1064 | 171 | 3.1E-221 | – | |
| ProSiteProfiles | 897 | 931 | 35 | 11.049 | ||
| TIGRFAM | 899 | 932 | 34 | 5.8E-7 | ||
| Pfam | 900 | 928 | 29 | 1.3E-4 | ||
| Pfam | 931 | 979 | 49 | 3.1E-14 | ||
| ProSiteProfiles | 932 | 966 | 35 | 13.154 | ||
| TIGRFAM | 935 | 967 | 33 | 9.2E-10 | ||
| ProSiteProfiles | 967 | 1001 | 35 | 11.586 | ||
| TIGRFAM | 970 | 1003 | 34 | 1.3E-6 | ||
| Gene3D | 997 | 1066 | 70 | 2.6E-20 | ||
| Pfam | 1001 | 1045 | 45 | 7.5E-17 | ||
| ProSiteProfiles | 1002 | 1036 | 35 | 14.546 | ||
| TIGRFAM | 1004 | 1037 | 34 | 2.7E-11 | ||
| ProSiteProfiles | 1037 | 1071 | 35 | 10.271 | ||
| TIGRFAM | 1039 | 1073 | 35 | 8.6E-4 | ||
| PANTHER | 1061 | 1113 | 53 | 3.1E-221 | – | |
| Gene3D | 1067 | 1116 | 50 | 1.5E-9 | ||
| Pfam | 1071 | 1111 | 41 | 1.2E-9 | ||
| ProSiteProfiles | 1072 | 1106 | 35 | 11.948 | ||
| TIGRFAM | 1074 | 1108 | 35 | 3.4E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0376500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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