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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0412800 |
| Transcript ID | LotjaGi1g1v0412800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor protein kinase, putative; TAIR: AT5G49660.1 Leucine-rich repeat transmembrane protein kinase family protein; Swiss-Prot: sp|Q9SGP2|HSL1_ARATH Receptor-like protein kinase HSL1; TrEMBL-Plants: tr|K7KJ03|K7KJ03_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0412800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:90407253..90411370) extracted from Lotus japonicus Gifu genome v1.2.
CATTTTTATTCTACATCCTGTACAGGAGGATATATGAGTATAAAGTATACTCTGCATTAATGTTATTCTCTACATGAGCT AGTGGTAGTGGAGTATAAATGTAAAGCCTCTTTCCCAAAGATAGATGTTCACAATTCACTTCACCCACCCAGTAGTACTA CAACAACAAGAACCTGCTTTTTCATCACCAAGCCTTTGTCACCCCAAAGTGATCCACTCAACCATTCCATCTTATATACA TCTCTTTCTCATCTCAACGTTTATACTAACCACAAACATCATAACCTCTATCTCCTTCCCCTCTATCCCCTCCTCTCTCA GAATGAGTCATTCATTCTTCGTCTCTGTTATTATTGGAGTCATCATTTCCATGACTAGCATATCACATGTTATGAGCAGT ACCAACCAGTCTCAGTTTTTTTCTCTGATGAAGGAGTCTCTATCAGGGAACTTCCCTCTGGATTGGGATTACAGAGTTGG GAAACCATTCTGCAACTTCACAGGAGTTGCCTGCAACAGCAAAGGTGATGTTATCAATCTAGACTTTTCAGGCTGGTCAC TTTCAGGGAACTTCCCTTCAGATTTCTGCTCTTACCTTCCAGAGCTGAGAGTTCTTAAACTCAGCCATACCAGGTTCAAG TTCCCTGCACACAGCATAGTCAACTGTTCCCACTTGGAAGTGCTTGACATGAATCACATGTTTCAGACCACCACACTCCC CAACTTCTCTCCTTTGAAATCTCTCAGGATTCTTGACCTATCCTACAACCTCTTCACTGGTGAATTCCCCATGTCAGTTT TCAACCTGACAACTCTGGAGGTGCTCAACTTCAATGAAAACCAAGGCTTCAAATTCTGGCAGCTCCCAGCAAGATTTGAC AGGCTGCAAAATCTCAAAACCATGGTGCTGACAACATGCATGTTGCATGGCCAAATCCCAGCATCCATAGGAAACATGAC TTCTCTTATTGATCTTGAATTGAGTGGGAATTTCCTCTCAGGGAAAATTCCCGCAGAGCTTGGATTGCTGAAGAACTTGC AACTGCTTGAGCTTTACTATAACTACCATCTAGTTGGGAACATACCAGAGGAGCTGGGAAATCTCACTGAGCTCATAGAC CTGGACATGTCGGTGAACAAGCTGACAGGGACCATCCCAGAATCCATATGTCGCCTTCCCAAGCTTCAAGTTCTGCAGCT TTACAACAACAGCCTCTCAGGAGAAATCCCAGGTGCGATTGAGAACTCAACAGCCTTGAGCACCCTATCTCTCTACGACA ACTTCCTGGGAGGACATATTCCCAAGAAGCTGGGACAGTTCTCAGGAATGGTGGTTCTGGACCTGTCTGAAAACAGATTG ACTGGTCCATTGCCAACAGAAGTTTGCAAAGGAGGTAAGCTGCAATACTTCCTTGTCTTGGATAACATGTTTTCTGGTGA GATACCAGAGAGTTATGCAAACTGCATGCAGCTGTTGAGGTTTAGAGTCAGCAATAACCGTTTGGAGGGCACAGTTCCCA AGGGACTCCTTGGTCTACCATACGTTTCAATCATTGATTTGAGTAGTAATAATTTGACTGGTCCAATTCCCGAGATTAAT GGGAACTCTAGAAACTTGTCTGAACTGTTCCTACAGAGGAACAAGATATCAGGACTCATACCTCATACAATCTCTAGAGC TTTTAGCCTTGTCAAGATTGATTTCAGCTATAATCTTCTCTCAGGTCCAATCCCTTCTGAGATTGGCAACCTGGGAAGGC TGAATTTACTCATGTTACAAGGGAACAAGCTGAGTTCTTCAATCCCAAGTTCACTCTCCTCCTTGAAGTCCCTCAACCTT CTTGATCTCTCCAACAACCTCTTAACTGGGACCATCCCTGAAAGCCTCGCTGTGCTGCTACCCAATTCCATTAACTTCTC TCAAAATTTGCTTTCTGGTCCAATTCCTCCCAAGTTAATCAAAGGGGGTTTAATTGAAAGCTTTTCAGGCAATCCAGGTT TGTGTGTGCTGCCAGTATATGCTAATTCATCTGATCAAAAGTTCCCCCTATGTTCACACGCCAACAAGAGCAAGAGGATA AACACCATCTGGGTAGCTGGGGTATCAGTGGTTTTGATCTTTATTGGAGCTGTCTTGTTCCTCAAACGTAGGTGCAGCAA GGACACAGCTGTTATGGAACATGAGGACACACTGTCTTCTTCATTCTTCTCTTATGATGTTAAGAGCTTTCACAAGGTTA CTTTCGACCAAAGGGAGATCGTTGAATCCATGGTGGATAAGAACATCCTGGGGCATGGAGGGTCTGGCACAGTGTACAAG ATTGAGCTGAGAAGCGGTGATATTGTTGCAGTCAAGAGGCTTTGGAGTAGAAAATCCAAGGATTCAACTCCAGAGGATCG GTTGTTTGTGGACAAGGCATTGAAAGCTGAGGTGGAGACACTGGGGAGTATAAGACACAAGAACATAGTCAAACTCTACT GCTGCTTCACCAGTTTGGACTGCAGCTTGTTGGTCTATGAATACATGCCAAATGGTACTCTATGGGATTCTCTGCACAAA GGTTGGGTCCTTTTGGATTGGCCTACTCGTTATAGAATTGCACTGGGGATTGCACAGGGTCTAGCATACCTCCACCATGA TTTGGTTTTTCCCATCATTCATAGAGATATCAAGTCAACTAACATCCTATTGGATGTTGATTACCAGCCCAAAGTTGCAG ACTTTGGGATCGCCAAGGTTTTGCAAGCAAGAAGCGGGAAGGATTCCACAACAACTGTTATTGCAGGAACATATGGTTAC TTGGCCCCAGGTAATTATTTCTATAACCAAACTATAAAGTATATCATTCATATCTGGAGAAATAATTCAATTTACTCTAT TACTATCATTTGTTTTTAGAAAACGATAAATGTTTATTTCAATATAGAGTAATTGTTTACAACAATCAGTCTTTAAGTAC TGATATATCTATCTGTTGCACACACAAATAATCAGTGTCATGTGGTATTGTGGTAACTCCCCTATCATCTAGTATCTTTG ATTAATATTTATTCAACTTGTTTTCATGACTGTTACAGAATATGCATATTCACCAAGGCCCACCACCAAGTGTGATGTGT ACAGTTTTGGGGTGATTTTGATGGAGTTGTTGACTGGGAAGAAGCCTGTTGGGGCAGAATTTGGAGAGAACAGAAACATA GTCTTTTGGGTTTCAAACAAAGTAGAAGGCAAGGATGGGGCTAGACCAAGTGAGGCACTTGATCCAAGACTATCATGTTC ATGGAAGGATGACATGATTAAAGTGCTGCGGATTGCCATTCGCTGCACCTACAAAGCCCCAGCTAGTAGACCAACCATGA AAGAGGTTGTTCAGCTTCTGATTGAGGCAGAGCCACGAAATTCTGATTCTTGCAAGTTGTCAACCAAAGATGCATCAAAT GTCACTATAATAAAGAAGCCATTTGAATTGTAATTAACTAAGTAGCATAAAGGGGTGAGAGGGAGCATAAGACAACTTAG ATAAACAGTCTCTCTTGAGATAACTGAGAGGCTCACTGTATAGTAGAGAACAAACTACTATAATCTTTTTTCTAGACAAG CAAATATGTAGATTTTATCTTTGACTCTGGTTCTTTTTACTATTGCTACCTGATATATACTATTTTGACTTTTGTAAAAA ATTGAAATCACTTTGTGGACTGTCCCGCCCAAAATGAACAATAAACTATTGAAGATAGCCATGGCGGGAAGTGCGACACA ACGAGCTTCATTGCCCTCCCTTAGATGATGGACCCACAAGCCAGCTGGAAGATTCCTTTGGATTTGTCTTATATGTACAG GGATTTGGGCCCTGATTGTCAGGCCCACATTTAGGAAAAGTCCATGTCATGACTTCACCCTCTATAAAAGGGAAGGTCAT CAGCTTGTACAACTTAACCTTTAAAAAACATTTAATGAGAATATTCCTTTTGTGATATTTTTAGTACTCTGCTAGGGTTT ACTTTCTGTCAGTTTCCGACGTCAGATCTCCCTAGTACAGAACATTGGCGCCGTCTGTGGGTCTTACTTTGATCTACTAC TTGACATAGAGGGTGCGTTTTAAGATCCATGGAAACTC
CDS sequence (LotjaGi1g1v0412800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCACAATTCACTTCACCCACCCAGTAGTACTACAACAACAAGAACCTGCTTTTTCATCACCAAGCCTTTGTCACCC CAAAGTGATCCACTCAACCATTCCATCTTATATACATCTCTTTCTCATCTCAACGTTTATACTAACCACAAACATCATAA CCTCTATCTCCTTCCCCTCTATCCCCTCCTCTCTCAGAATGAGTCATTCATTCTTCGTCTCTGTTATTATTGGAGTCATC ATTTCCATGACTAGCATATCACATGTTATGAGCAGTACCAACCAGTCTCAGTTTTTTTCTCTGATGAAGGAGTCTCTATC AGGGAACTTCCCTCTGGATTGGGATTACAGAGTTGGGAAACCATTCTGCAACTTCACAGGAGTTGCCTGCAACAGCAAAG GTGATGTTATCAATCTAGACTTTTCAGGCTGGTCACTTTCAGGGAACTTCCCTTCAGATTTCTGCTCTTACCTTCCAGAG CTGAGAGTTCTTAAACTCAGCCATACCAGGTTCAAGTTCCCTGCACACAGCATAGTCAACTGTTCCCACTTGGAAGTGCT TGACATGAATCACATGTTTCAGACCACCACACTCCCCAACTTCTCTCCTTTGAAATCTCTCAGGATTCTTGACCTATCCT ACAACCTCTTCACTGGTGAATTCCCCATGTCAGTTTTCAACCTGACAACTCTGGAGGTGCTCAACTTCAATGAAAACCAA GGCTTCAAATTCTGGCAGCTCCCAGCAAGATTTGACAGGCTGCAAAATCTCAAAACCATGGTGCTGACAACATGCATGTT GCATGGCCAAATCCCAGCATCCATAGGAAACATGACTTCTCTTATTGATCTTGAATTGAGTGGGAATTTCCTCTCAGGGA AAATTCCCGCAGAGCTTGGATTGCTGAAGAACTTGCAACTGCTTGAGCTTTACTATAACTACCATCTAGTTGGGAACATA CCAGAGGAGCTGGGAAATCTCACTGAGCTCATAGACCTGGACATGTCGGTGAACAAGCTGACAGGGACCATCCCAGAATC CATATGTCGCCTTCCCAAGCTTCAAGTTCTGCAGCTTTACAACAACAGCCTCTCAGGAGAAATCCCAGGTGCGATTGAGA ACTCAACAGCCTTGAGCACCCTATCTCTCTACGACAACTTCCTGGGAGGACATATTCCCAAGAAGCTGGGACAGTTCTCA GGAATGGTGGTTCTGGACCTGTCTGAAAACAGATTGACTGGTCCATTGCCAACAGAAGTTTGCAAAGGAGGTAAGCTGCA ATACTTCCTTGTCTTGGATAACATGTTTTCTGGTGAGATACCAGAGAGTTATGCAAACTGCATGCAGCTGTTGAGGTTTA GAGTCAGCAATAACCGTTTGGAGGGCACAGTTCCCAAGGGACTCCTTGGTCTACCATACGTTTCAATCATTGATTTGAGT AGTAATAATTTGACTGGTCCAATTCCCGAGATTAATGGGAACTCTAGAAACTTGTCTGAACTGTTCCTACAGAGGAACAA GATATCAGGACTCATACCTCATACAATCTCTAGAGCTTTTAGCCTTGTCAAGATTGATTTCAGCTATAATCTTCTCTCAG GTCCAATCCCTTCTGAGATTGGCAACCTGGGAAGGCTGAATTTACTCATGTTACAAGGGAACAAGCTGAGTTCTTCAATC CCAAGTTCACTCTCCTCCTTGAAGTCCCTCAACCTTCTTGATCTCTCCAACAACCTCTTAACTGGGACCATCCCTGAAAG CCTCGCTGTGCTGCTACCCAATTCCATTAACTTCTCTCAAAATTTGCTTTCTGGTCCAATTCCTCCCAAGTTAATCAAAG GGGGTTTAATTGAAAGCTTTTCAGGCAATCCAGGTTTGTGTGTGCTGCCAGTATATGCTAATTCATCTGATCAAAAGTTC CCCCTATGTTCACACGCCAACAAGAGCAAGAGGATAAACACCATCTGGGTAGCTGGGGTATCAGTGGTTTTGATCTTTAT TGGAGCTGTCTTGTTCCTCAAACGTAGGTGCAGCAAGGACACAGCTGTTATGGAACATGAGGACACACTGTCTTCTTCAT TCTTCTCTTATGATGTTAAGAGCTTTCACAAGGTTACTTTCGACCAAAGGGAGATCGTTGAATCCATGGTGGATAAGAAC ATCCTGGGGCATGGAGGGTCTGGCACAGTGTACAAGATTGAGCTGAGAAGCGGTGATATTGTTGCAGTCAAGAGGCTTTG GAGTAGAAAATCCAAGGATTCAACTCCAGAGGATCGGTTGTTTGTGGACAAGGCATTGAAAGCTGAGGTGGAGACACTGG GGAGTATAAGACACAAGAACATAGTCAAACTCTACTGCTGCTTCACCAGTTTGGACTGCAGCTTGTTGGTCTATGAATAC ATGCCAAATGGTACTCTATGGGATTCTCTGCACAAAGGTTGGGTCCTTTTGGATTGGCCTACTCGTTATAGAATTGCACT GGGGATTGCACAGGGTCTAGCATACCTCCACCATGATTTGGTTTTTCCCATCATTCATAGAGATATCAAGTCAACTAACA TCCTATTGGATGTTGATTACCAGCCCAAAGTTGCAGACTTTGGGATCGCCAAGGTTTTGCAAGCAAGAAGCGGGAAGGAT TCCACAACAACTGTTATTGCAGGAACATATGGTTACTTGGCCCCAGAATATGCATATTCACCAAGGCCCACCACCAAGTG TGATGTGTACAGTTTTGGGGTGATTTTGATGGAGTTGTTGACTGGGAAGAAGCCTGTTGGGGCAGAATTTGGAGAGAACA GAAACATAGTCTTTTGGGTTTCAAACAAAGTAGAAGGCAAGGATGGGGCTAGACCAAGTGAGGCACTTGATCCAAGACTA TCATGTTCATGGAAGGATGACATGATTAAAGTGCTGCGGATTGCCATTCGCTGCACCTACAAAGCCCCAGCTAGTAGACC AACCATGAAAGAGGTTGTTCAGCTTCTGATTGAGGCAGAGCCACGAAATTCTGATTCTTGCAAGTTGTCAACCAAAGATG CATCAAATGTCACTATAATAAAGAAGCCATTTGAATTGTAA
Protein sequence (LotjaGi1g1v0412800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFTIHFTHPVVLQQQEPAFSSPSLCHPKVIHSTIPSYIHLFLISTFILTTNIITSISFPSIPSSLRMSHSFFVSVIIGVI ISMTSISHVMSSTNQSQFFSLMKESLSGNFPLDWDYRVGKPFCNFTGVACNSKGDVINLDFSGWSLSGNFPSDFCSYLPE LRVLKLSHTRFKFPAHSIVNCSHLEVLDMNHMFQTTTLPNFSPLKSLRILDLSYNLFTGEFPMSVFNLTTLEVLNFNENQ GFKFWQLPARFDRLQNLKTMVLTTCMLHGQIPASIGNMTSLIDLELSGNFLSGKIPAELGLLKNLQLLELYYNYHLVGNI PEELGNLTELIDLDMSVNKLTGTIPESICRLPKLQVLQLYNNSLSGEIPGAIENSTALSTLSLYDNFLGGHIPKKLGQFS GMVVLDLSENRLTGPLPTEVCKGGKLQYFLVLDNMFSGEIPESYANCMQLLRFRVSNNRLEGTVPKGLLGLPYVSIIDLS SNNLTGPIPEINGNSRNLSELFLQRNKISGLIPHTISRAFSLVKIDFSYNLLSGPIPSEIGNLGRLNLLMLQGNKLSSSI PSSLSSLKSLNLLDLSNNLLTGTIPESLAVLLPNSINFSQNLLSGPIPPKLIKGGLIESFSGNPGLCVLPVYANSSDQKF PLCSHANKSKRINTIWVAGVSVVLIFIGAVLFLKRRCSKDTAVMEHEDTLSSSFFSYDVKSFHKVTFDQREIVESMVDKN ILGHGGSGTVYKIELRSGDIVAVKRLWSRKSKDSTPEDRLFVDKALKAEVETLGSIRHKNIVKLYCCFTSLDCSLLVYEY MPNGTLWDSLHKGWVLLDWPTRYRIALGIAQGLAYLHHDLVFPIIHRDIKSTNILLDVDYQPKVADFGIAKVLQARSGKD STTTVIAGTYGYLAPEYAYSPRPTTKCDVYSFGVILMELLTGKKPVGAEFGENRNIVFWVSNKVEGKDGARPSEALDPRL SCSWKDDMIKVLRIAIRCTYKAPASRPTMKEVVQLLIEAEPRNSDSCKLSTKDASNVTIIKKPFEL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 36 | 36 | - | – | |
| TMHMM | 36 | 58 | 23 | - | – | |
| Phobius | 37 | 58 | 22 | - | – | |
| Phobius | 59 | 69 | 11 | - | – | |
| TMHMM | 70 | 92 | 23 | - | – | |
| Phobius | 70 | 90 | 21 | - | – | |
| PANTHER | 80 | 1004 | 925 | 0.0 | – | |
| PANTHER | 80 | 1004 | 925 | 0.0 | – | |
| Phobius | 91 | 654 | 564 | - | – | |
| Gene3D | 94 | 243 | 150 | 5.8E-28 | ||
| SUPERFAMILY | 137 | 414 | 278 | 2.75E-51 | – | |
| SMART | 158 | 181 | 24 | 260.0 | ||
| SMART | 204 | 228 | 25 | 73.0 | ||
| Gene3D | 244 | 305 | 62 | 3.6E-12 | ||
| SMART | 278 | 302 | 25 | 300.0 | ||
| Gene3D | 315 | 637 | 323 | 2.4E-86 | ||
| SUPERFAMILY | 315 | 635 | 321 | 3.57E-48 | – | |
| SMART | 351 | 375 | 25 | 39.0 | ||
| SMART | 399 | 423 | 25 | 210.0 | ||
| SMART | 543 | 566 | 24 | 190.0 | ||
| SMART | 567 | 591 | 25 | 130.0 | ||
| TMHMM | 654 | 673 | 20 | - | – | |
| Phobius | 655 | 673 | 19 | - | – | |
| Phobius | 674 | 1026 | 353 | - | – | |
| Gene3D | 690 | 800 | 111 | 7.5E-21 | – | |
| SUPERFAMILY | 703 | 996 | 294 | 4.86E-74 | ||
| SMART | 716 | 1003 | 288 | 1.2E-37 | ||
| ProSiteProfiles | 716 | 1003 | 288 | 38.096 | ||
| Pfam | 718 | 994 | 277 | 1.2E-46 | ||
| ProSitePatterns | 722 | 744 | 23 | - | ||
| Gene3D | 801 | 1021 | 221 | 3.3E-58 | – | |
| ProSitePatterns | 844 | 856 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0412800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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