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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0443800 |
| Transcript ID | LotjaGi1g1v0443800.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pyruvate decarboxylase; TAIR: AT4G33070.1 Thiamine pyrophosphate dependent pyruvate decarboxylase family protein; Swiss-Prot: sp|O82647|PDC1_ARATH Pyruvate decarboxylase 1; TrEMBL-Plants: tr|Q84V95|Q84V95_LOTCO Pyruvate decarboxylase 1; Found in the gene: LotjaGi1g1v0443800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:94152778..94156764) extracted from Lotus japonicus Gifu genome v1.2.
GAAAGATTTATTATAAGTGATATCTGAGTCTCGAAAGAATTTGCCTCAGCCGATCGGTTTTGAATACCTTAAAAAAAAAA AAGTGGGAAACACTGAAACAGCAAACCGCCCCTGGTATCTATCTTTCTTTCCCATTTCCAAACACCTCCACTGGGTTTCC ATTACCGCTTACCCCTCTTCCAAGGCACAGTTCACACACAGAACTTTCCAGTATATAATAACTCTCCTCATTTCTACACA CTTCCCATTCATCAAAATTTTCCTCTCTTCATATTCCCTCTGTTTCACTCTACTATCTCATTTTTTCTTTCCTTCCATTT TCCACTAAACCATGGACGTAAAGTTAGGTTCTCTCGACACAACCAAGCCAGCAAGCAACGACGTCGTTTCATGCGCCACC GCCAACCACACCACGGCGATCCAGTCCTCGATCCCATCAACGGCGGTGTCCACCTGCGACGCCACGCTCGGCCGCCACCT CGCGCGCCGCCTAGCTCAGATCGGCGTCACCGACGTGTTCTCCGTCCCCGGCGACTTCAACCTCACGCTGCTCGACCACC TCATCGCTGAACCGCAGCTCAACCTCGTCGGCTGCTGCAACGAGCTCAACGCTGGGTACGCCGCTGACGGCTACGCTCGA GCACGCGGCGTCGGCGCCTGCGTCGTGACGTTCACCGTCGGTGGACTCAGCGTGCTCAACGCTATTGCTGGAGCTTACAG TGAGAACTTGCCCCTCATTTGCATCGTTGGTGGGCCGAACTCCAACGACTATGGAACCAGCAGGATCCTTCATCATACCA TTGGGTTGCCGGATTTCACACAGGAGTTGAGGTGTTTTCAGACTGTTACTTGCTTTCAGGTACCAAATCTCAAACTGGGT CTCTTTCTTTTTTCTGTATTTGGAATGTTGGGTTTGGTTATGAATTTCCTTTTTTGCTAGTTCTTGATGTGAGAATTGAT GGTTAATTTGAGGTTTATTCAATGATATAGTTTATATCATGAGGGTTTAACTTTTAAGCATAAGATTATTTATATAAACT CACTTGAGGAACTTATTGAACTAAATAAGCTTATAAGCTTAATCAAATAAGGCCCAATTTGGAACAACTTATTTGAGCTT ATCTGATATAGCATAAGCGCTTGTGTAAGTGTTTGAGAGAGCTTATGCAAACCGCTTATGAGCTTATGCAAACAGCTCAG GATAGCTTATGAATAAGCGAAGAACTTAATTAAGTTGTTTTTCCAACGCTTAATTGTAAGATAAAGCACAAATAAGCTCT TGAAAAGCTCTTCTAATAACCCATTTGATGTCACTTTAAGTTTGTTGTAGTGGTGGGTTTGTATTTCTGTGTTGTGAATT TGATGAGATGTTTGTTTAATGGGTTTTGGTAATTTGTTGGTTGGTTTGGTTGTAGGCTGTGGTGAATAATTTGGAGGATG CTCATGAGCAGATTGATACAGCAATCTCAACTGCACTGAAAGAGAGCAAGCCTGTGTATATAAGCATTAGCTGTAACTTG CCTGGGATTCCTCATCCTACTTTCAGCCGCGATCCTGTTCCTTTTTCATTGTCTGCCAAGTATGTCATTTTTTTTTGTCC ATTATTAACTGGTTTGTGGAGAATCCAGTTATGGGAAATATTGATTTTTAACTATTTTGGTTTGGGTGGTTTGCAGATTG AGTAACCAGATGGGGTTGGAGGCAGCAGTAGAGGCAACTGCGGAGTTCCTTAACAAGGCTGTGAAACCAGTACTTGTGGG TGGTCCTAAACTGAGGGTTGCAAAAGCATCTGATGCCTTTGTTGAACTAGCTGATGCAAGTGGTTATGCTCTTGCTGTGA TGCCATCAGCTAAAGGGCAAGTTCCAGAGCACCATCCCCATTTCATTGGAACTTATTGGGGTGCTGTGAGCACTGCATTC TGTGCTGAGATTGTGGAGTCTGCTGATGCGTATTTGTTTGCTGGTCCCATTTTCAATGACTACAGCTCTGTGGGGTACTC ACTTCTTCTCAAGAAAGAGAAGGCAATCATTGTGCAGCCTGATCGCGTTGTGATTGCCAATGGGCCTGCATTTGGGTGTG TGCTGATGAAGGACTTCCTCAAGGCACTTGCGAAGCGTCTCAAACACAACAATGCTGCATATGAAAACTACCACAGGATA TTCGTCCCTGAAGGGAAGCCTTTGAAGTCTGCACCGAAAGAACCTTTGAGGGTTAATGTTATGTTCCAGCATATACAAAA GATGCTGTCTGGTGAAACAGCTGTGATTGCTGAGACAGGGGACTCATGGTTTAACTGCCAAAAGCTGAAATTGCCAAGAG GGTGTGGGTAAGTATCTGAGAGAATGTGATTTGTTGTGTTTCTCATGTTTTTCATGATGTTTATAGTATTGATAAAAATA ATATTGATAGGTATGAGTTTCAAATGCAATATGGCTCAATTGGATGGTCTGTTGGTGCAACCCTTGGCTATGCACAGGCA GTCCCTGAGAAGCGAGTGATTGCTTGCATTGGTGATGGAAGCTTTCAGGTTTGTCATGCATAACTACTTATAGCATATGT TTGGATCAACTTATTTTTCTCTGAATCAATTCTGATACCCTGAAGCTACTCATAGAAGCTTCTTCTCAGAATTCATTTTG GCTTCAAATCATACACTTAAAGCATGATTTCAATCAAAATGCAATTTATTTTTGTTTCGGTGTTTTAAAGTTTCTCTTAA TCTTCACTTCTAGACAATGCTTGAACTGAACATTGTGTTTTTATCTTTCTTTAAACTGCTTTGCAGGTGACTGCTCAGGA TGTATCGACAATGCTGCGATGCGGTCAAAACACCATCATCTTCCTGATAAACAATGGTGGATACACCATCGAGGTTGAAA TTCATGATGGGCCATACAATGTGATTAAGAACTGGAACTACACTGGGCTGATTGAAGCAATCCACAATGGTGAAGGGAAA TGCTGGACTTCCAAGGTGAGTTTCTTGACATGGTTTAATCCTCTCAAACTACGCTTCTGTAACATGGAGAAGAAGTGCTG ATCTTGTATCTATTCATGGATTATTCATTTCAGGTCTTCTGTGAAGAGGAGCTAGTTGAAGCAATTGCAACTGCAACAGG ACCAAAGAAAGATTGCTTATGCTTCATTGAGGTGATTGTTCACAAGGATGATACCAGCAAAGAGTTGCTTGAATGGGGCT CCAGGGTCTCTGCTGCCAATGGTCGTCCTCCCAATCCTCAGTAAACTTCAGACCCTGCCTGTTACTTACATTGCTGAAAT TGCCCTTTTACTCTGAAGAATTGAGAACCCTTCTTCGTTAGAATTGAGAACCCTCAAGATTTGTACTTCCACGGAATTTG CTTTTCTTATTGTCTTGCTCGTTTATGTAACTTTGTCCACCGTTTTGTATAAATGCATTCAATTGAGATCAAAAGCATCC ATCACCTTGTTTATCTCGTAATAATGCTTATAGTTACTTCAAGATTCTTATGTTGAGCATCACTTTTTTTTCTTTCTAGG TGCATTATGTTAAAGAATCATTTTACAGACGTTAATTAATGGATTTCACTCAAAATGTTCCCAGCATAAATATGAAAAAA CACCTGAATACAAGTAGAAATATTTCCAATCCAAAATTCATCAAGACTTTATGGCCATTGCTTCTGCAAAACCTGCACCC ATATACGCATTCTAAGACTAAGTTCCAGCGGCAAGAGCTTCACCATTCTGATCTCTAATGACCGCCGTCGTCCCAAATCA ACCTGCTGCATCAGTATTGAGCTTTGCACAAATTGCAGAGTCCATCCCCTTATTGAACCAGCAGAGCCATTTGCAGCAGA AAAATCAACATGTTAAAGAATCATTACTTGGGTTGTGAGGTGTCAATGGAAGACATGCGGCTGAATTTGAACCAAACAAC ATAGTTGTTTTAAAAAACAAACAATCCCCCTCTAATCAATACTATGTAAAAACTAGGTGTAGACCCG
CDS sequence (LotjaGi1g1v0443800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACGTAAAGTTAGGTTCTCTCGACACAACCAAGCCAGCAAGCAACGACGTCGTTTCATGCGCCACCGCCAACCACAC CACGGCGATCCAGTCCTCGATCCCATCAACGGCGGTGTCCACCTGCGACGCCACGCTCGGCCGCCACCTCGCGCGCCGCC TAGCTCAGATCGGCGTCACCGACGTGTTCTCCGTCCCCGGCGACTTCAACCTCACGCTGCTCGACCACCTCATCGCTGAA CCGCAGCTCAACCTCGTCGGCTGCTGCAACGAGCTCAACGCTGGGTACGCCGCTGACGGCTACGCTCGAGCACGCGGCGT CGGCGCCTGCGTCGTGACGTTCACCGTCGGTGGACTCAGCGTGCTCAACGCTATTGCTGGAGCTTACAGTGAGAACTTGC CCCTCATTTGCATCGTTGGTGGGCCGAACTCCAACGACTATGGAACCAGCAGGATCCTTCATCATACCATTGGGTTGCCG GATTTCACACAGGAGTTGAGGTGTTTTCAGACTGTTACTTGCTTTCAGGCTGTGGTGAATAATTTGGAGGATGCTCATGA GCAGATTGATACAGCAATCTCAACTGCACTGAAAGAGAGCAAGCCTGTGTATATAAGCATTAGCTGTAACTTGCCTGGGA TTCCTCATCCTACTTTCAGCCGCGATCCTGTTCCTTTTTCATTGTCTGCCAAATTGAGTAACCAGATGGGGTTGGAGGCA GCAGTAGAGGCAACTGCGGAGTTCCTTAACAAGGCTGTGAAACCAGTACTTGTGGGTGGTCCTAAACTGAGGGTTGCAAA AGCATCTGATGCCTTTGTTGAACTAGCTGATGCAAGTGGTTATGCTCTTGCTGTGATGCCATCAGCTAAAGGGCAAGTTC CAGAGCACCATCCCCATTTCATTGGAACTTATTGGGGTGCTGTGAGCACTGCATTCTGTGCTGAGATTGTGGAGTCTGCT GATGCGTATTTGTTTGCTGGTCCCATTTTCAATGACTACAGCTCTGTGGGGTACTCACTTCTTCTCAAGAAAGAGAAGGC AATCATTGTGCAGCCTGATCGCGTTGTGATTGCCAATGGGCCTGCATTTGGGTGTGTGCTGATGAAGGACTTCCTCAAGG CACTTGCGAAGCGTCTCAAACACAACAATGCTGCATATGAAAACTACCACAGGATATTCGTCCCTGAAGGGAAGCCTTTG AAGTCTGCACCGAAAGAACCTTTGAGGGTTAATGTTATGTTCCAGCATATACAAAAGATGCTGTCTGGTGAAACAGCTGT GATTGCTGAGACAGGGGACTCATGGTTTAACTGCCAAAAGCTGAAATTGCCAAGAGGGTGTGGGTATGAGTTTCAAATGC AATATGGCTCAATTGGATGGTCTGTTGGTGCAACCCTTGGCTATGCACAGGCAGTCCCTGAGAAGCGAGTGATTGCTTGC ATTGGTGATGGAAGCTTTCAGGTGACTGCTCAGGATGTATCGACAATGCTGCGATGCGGTCAAAACACCATCATCTTCCT GATAAACAATGGTGGATACACCATCGAGGTTGAAATTCATGATGGGCCATACAATGTGATTAAGAACTGGAACTACACTG GGCTGATTGAAGCAATCCACAATGGTGAAGGGAAATGCTGGACTTCCAAGGTCTTCTGTGAAGAGGAGCTAGTTGAAGCA ATTGCAACTGCAACAGGACCAAAGAAAGATTGCTTATGCTTCATTGAGGTGATTGTTCACAAGGATGATACCAGCAAAGA GTTGCTTGAATGGGGCTCCAGGGTCTCTGCTGCCAATGGTCGTCCTCCCAATCCTCAGTAA
Protein sequence (LotjaGi1g1v0443800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDVKLGSLDTTKPASNDVVSCATANHTTAIQSSIPSTAVSTCDATLGRHLARRLAQIGVTDVFSVPGDFNLTLLDHLIAE PQLNLVGCCNELNAGYAADGYARARGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTSRILHHTIGLP DFTQELRCFQTVTCFQAVVNNLEDAHEQIDTAISTALKESKPVYISISCNLPGIPHPTFSRDPVPFSLSAKLSNQMGLEA AVEATAEFLNKAVKPVLVGGPKLRVAKASDAFVELADASGYALAVMPSAKGQVPEHHPHFIGTYWGAVSTAFCAEIVESA DAYLFAGPIFNDYSSVGYSLLLKKEKAIIVQPDRVVIANGPAFGCVLMKDFLKALAKRLKHNNAAYENYHRIFVPEGKPL KSAPKEPLRVNVMFQHIQKMLSGETAVIAETGDSWFNCQKLKLPRGCGYEFQMQYGSIGWSVGATLGYAQAVPEKRVIAC IGDGSFQVTAQDVSTMLRCGQNTIIFLINNGGYTIEVEIHDGPYNVIKNWNYTGLIEAIHNGEGKCWTSKVFCEEELVEA IATATGPKKDCLCFIEVIVHKDDTSKELLEWGSRVSAANGRPPNPQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 606 | 606 | 0.0 | – | |
| PANTHER | 1 | 606 | 606 | 0.0 | – | |
| Gene3D | 20 | 218 | 199 | 4.5E-67 | – | |
| PIRSF | 40 | 601 | 562 | 4.5E-211 | ||
| SUPERFAMILY | 45 | 223 | 179 | 2.24E-44 | ||
| Pfam | 45 | 212 | 168 | 1.8E-35 | ||
| CDD | 48 | 209 | 162 | 1.82919E-91 | – | |
| Gene3D | 231 | 394 | 164 | 7.5E-65 | – | |
| SUPERFAMILY | 231 | 384 | 154 | 5.02E-32 | ||
| Pfam | 242 | 358 | 117 | 8.0E-19 | ||
| Gene3D | 400 | 588 | 189 | 1.6E-53 | – | |
| SUPERFAMILY | 407 | 599 | 193 | 3.23E-41 | ||
| CDD | 407 | 589 | 183 | 3.16059E-87 | – | |
| Pfam | 452 | 577 | 126 | 4.6E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Magnesium ion binding | Interacting selectively and non-covalently with magnesium (Mg) ions. | ||
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Carboxy-lyase activity | Catalysis of the nonhydrolytic addition or removal of a carboxyl group to or from a compound. | ||
| Molecular function | Thiamine pyrophosphate binding | Interacting selectively and non-covalently with thiamine pyrophosphate, the diphosphoric ester of thiamine. Acts as a coenzyme of several (de)carboxylases, transketolases, and alpha-oxoacid dehydrogenases. |
Expression pattern of LotjaGi1g1v0443800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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