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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0501400 |
| Transcript ID | LotjaGi1g1v0501400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Leucine-rich repeat receptor-like protein kinase family protein, putative; TAIR: AT4G08850.1 Leucine-rich repeat receptor-like protein kinase family protein; Swiss-Prot: sp|Q8VZG8|MIK2_ARATH MDIS1-interacting receptor like kinase 2; TrEMBL-Plants: tr|A0A151UBJ2|A0A151UBJ2_CAJCA Putative LRR receptor-like serine/threonine-protein kinase At4g08850; Found in the gene: LotjaGi1g1v0501400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:101826318..101829017) extracted from Lotus japonicus Gifu genome v1.2.
TCTCTGTTACAAAAAAAATAAAGTGGTTTATGTACCCTTTTGAATTAAATTGATATTTTTTTCGATGCCATCTTTAGTAG TCACTAACTTATTTTACACAATGCTAAATAATTTGAAGGTACTAAAATCCACCCATTTGATAAGGTACTGGCCTTAGTTG ACTTGTAATGAAGTGTGGTTCGTGAGTACTTACATTACTTAATAAGTTGGGTTTCATATCAGACATCTCTGCAGTAGTGC AGTCTGCACATTTCTCTGATTGATTGCATTCATCAAAAAATAATAATAATGCAGTACTCTTTTCTTTCTAGTAATTTTTA TGGACCGGTCCTCCTCCTCATTATTTCTTGTGTGATCATGATTTTTATGGACCCGTCGCTGTCAGTGGTATAGCATCGAT TGCAACAAGGCTGGGAGCATAACAGGAATTTACTCTCCCTACTTTCCGGGAGGAGAGCTTCATTTCGCAAAACTCAACCT CTCTGCTTTCCCGAACTTAGAAAGGCTTGTTGTTCGTGGAAGTAATCAGCGAGGGAGTATCCCACCACAAATTGGTATTC TCTCCAAACTCACTTATCTTGTTTTGTCAAACAATTCTCTTGAAGGCTCCATTCCTTGGGAGTTAGGTTCCCTCAAAAAT CTAAAAACATTGTCTCTATCTAGAAACAGAATCAACGGGACCATGCCTGCTTCACTTGCAAATCTCACTCAATTAGAATA TCTTGACATTTCCAACAATCTACTAGTTGGTTCACTTCCTTCTTATTTTGGCCAATTAACCAACTTGCAATGGTTGCAAC TAGGTAGCAACTCTATCAATGGGACATTGCCTACTTTTCTTTCAAATCCCACCCTGTTGGAACACCTTGACATTTCCAAC AATCTACTGGTTGGCTCCCTTCCTTCTAATTTTGGCCAGTTAACCAACTTGCAAGAGTTGTGGCTTCATAACAACTCCAT CAATGGGACATTGCCTTCTTCCCTTACAAATCTCACCCTGTTGGTAGACCTTGACATTTCCCAAAATCTACTGGTTGGTT CCCTTCCTCCTAATTTTGGCCAATTAAACAACTTGCAGAGGTTGCAACTAAGAAGTAACTTCATAACTGGTGATATACCA CCACAGCTTGGATATTTGCGTAACTTAGTCTATTTGGATCTAAGCCACAATAACCTCAATGGAACCATTCCCGGTTCTCT CCCTCAGATCATTTTCGTGAACGTGTCCTACAATTATTTGAAGGGTCCTATTCCGATTGGATTCACAGGATACGATCTAT TAGGGAACAAGGATGTGTGCAGTGATCTTTTGGATTACCAAATTAACTTTAAATTCCAACCTTGTCCACATGACAAACAC ACCAGTGACAAAATAAGCAAGATAAGTGACAAAGTAAAGCACAAACTAGTCATAGTTCTTCCAATCCTCGGTGTTTTAAT CTTGGCCTTCTCACTACTTTTGTGTCTTAGTAAACATCATATCACTACAAATCATAACAAACGTGCAAACACTACGACAG CTAAGAGTGGGGATTTGTTTTGCATATGGAATTTCGACGGAAATATGGCATATGAAGACATTACTAGAGCAACAGAAGAC TTTGACTTGAAATTTTGCATTGGGACAGGAGCATATGGGAGTGTTTATAAAGCACAATTACCTAGTGGCAAGGTCGTTGC CTTGAAGAAGCTCCATGGCTTTGAAGCAGAGGTTCCAGCTTTGGATGCATAATCCATACATATATCAGGTAGGTGCATTA GTTAATAATACTAGTTTATGCAAATTTTATACTTCCTTTAATCCATTTAATTTTCAGCCAGTTTTCCTTTGGATCATTTA ACTTGACCTTGTGGAATCGATCAATGCAGAGCTTGCATACACTATGGTTGTGAGTGAAAAGTGTGATGTTTATAGCTTTG GAGTTGTGGCACTTGAAACTTTAGTGGGAAGCCATCCTAAGGAAATACTGTCATCACTTCAATCAGCATCAACTGAAGAC ATCAAATTATGTGAAATATTGGACCCGCGCCTTCTGTTTCCAGGCAGGGCTGTTTTGCTTGACATACTTCAGGTTGCAAT AGTGACATTATCATGCTTAAATCCAAATCCTTGCTCGAGACCAACAATGAAATGTGTGTCTCAATACTTCCTCAGACCAC TAGCACCACTACACATTCCTGCCCGTGGAATTTCACTGCACCAGCTCATGAGTCAAGAACTCAGCATGACTTAAAACTCT GAACCCTTGAAATTGAAACTTCAAACTGATGTTGGTGTTATCAGAATTTAGTGCAAACTTATGACCAGGTTTATCTAATT ATTATGTTGCTTCATAAAGTTATATTTATCACTTATGTATCATTGGTAAACACTCCATTGGGATTAGTATCACCAGATCA TTTGTGTATTCATGTGTTGGACAAAACTGTTCAGAATGTTTGTTTGATGATTTCTCTCAAAGACTAGACAAAATTTGAAC GGATGGAATGAATCTAGTTTATCCTCTAATGGAGGTGAATGACTCAAAAATGGAACAACTAGATGTAATTTTCTAATTTC AAGGCTCTATTACCATTCAGGATTTTGTGAACGACTCATTGTGCCGTAGCTTTCATGAGGGTACCTCCTTAGTTATCTCC CTAACTCTCATGAGGGTTCCTTGTTACTTATTTTTTTCCCCTCTTATTAGGCCACTTTAC
CDS sequence (LotjaGi1g1v0501400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCTGCTTCACTTGCAAATCTCACTCAATTAGAATATCTTGACATTTCCAACAATCTACTAGTTGGTTCACTTCCTTC TTATTTTGGCCAATTAACCAACTTGCAATGGTTGCAACTAGGTAGCAACTCTATCAATGGGACATTGCCTACTTTTCTTT CAAATCCCACCCTGTTGGAACACCTTGACATTTCCAACAATCTACTGGTTGGCTCCCTTCCTTCTAATTTTGGCCAGTTA ACCAACTTGCAAGAGTTGTGGCTTCATAACAACTCCATCAATGGGACATTGCCTTCTTCCCTTACAAATCTCACCCTGTT GGTAGACCTTGACATTTCCCAAAATCTACTGGTTGGTTCCCTTCCTCCTAATTTTGGCCAATTAAACAACTTGCAGAGGT TGCAACTAAGAAGTAACTTCATAACTGGTGATATACCACCACAGCTTGGATATTTGCGTAACTTAGTCTATTTGGATCTA AGCCACAATAACCTCAATGGAACCATTCCCGGTTCTCTCCCTCAGATCATTTTCGTGAACGTGTCCTACAATTATTTGAA GGGTCCTATTCCGATTGGATTCACAGGATACGATCTATTAGGGAACAAGGATGTGTGCAGTGATCTTTTGGATTACCAAA TTAACTTTAAATTCCAACCTTGTCCACATGACAAACACACCAGTGACAAAATAAGCAAGATAAGTGACAAAGTAAAGCAC AAACTAGTCATAGTTCTTCCAATCCTCGGTGTTTTAATCTTGGCCTTCTCACTACTTTTGTGTCTTAGTAAACATCATAT CACTACAAATCATAACAAACGTGCAAACACTACGACAGCTAAGAGTGGGGATTTGTTTTGCATATGGAATTTCGACGGAA ATATGGCATATGAAGACATTACTAGAGCAACAGAAGACTTTGACTTGAAATTTTGCATTGGGACAGGAGCATATGGGAGT GTTTATAAAGCACAATTACCTAGTGGCAAGGTCGTTGCCTTGAAGAAGCTCCATGGCTTTGAAGCAGAGGTTCCAGCTTT GGATGCATAA
Protein sequence (LotjaGi1g1v0501400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPASLANLTQLEYLDISNNLLVGSLPSYFGQLTNLQWLQLGSNSINGTLPTFLSNPTLLEHLDISNNLLVGSLPSNFGQL TNLQELWLHNNSINGTLPSSLTNLTLLVDLDISQNLLVGSLPPNFGQLNNLQRLQLRSNFITGDIPPQLGYLRNLVYLDL SHNNLNGTIPGSLPQIIFVNVSYNYLKGPIPIGFTGYDLLGNKDVCSDLLDYQINFKFQPCPHDKHTSDKISKISDKVKH KLVIVLPILGVLILAFSLLLCLSKHHITTNHNKRANTTTAKSGDLFCIWNFDGNMAYEDITRATEDFDLKFCIGTGAYGS VYKAQLPSGKVVALKKLHGFEAEVPALDA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 92 | 92 | 5.1E-26 | ||
| PANTHER | 1 | 123 | 123 | 2.9E-79 | – | |
| Phobius | 1 | 241 | 241 | - | – | |
| PANTHER | 1 | 123 | 123 | 2.9E-79 | – | |
| SUPERFAMILY | 2 | 197 | 196 | 4.08E-48 | – | |
| SMART | 8 | 31 | 24 | 37.0 | ||
| Pfam | 10 | 69 | 60 | 5.0E-8 | ||
| PRINTS | 11 | 24 | 14 | 2.9E-5 | – | |
| SMART | 32 | 56 | 25 | 62.0 | ||
| SMART | 80 | 103 | 24 | 32.0 | ||
| Gene3D | 93 | 219 | 127 | 6.9E-31 | ||
| SMART | 104 | 128 | 25 | 140.0 | ||
| PANTHER | 122 | 198 | 77 | 2.9E-79 | – | |
| PANTHER | 122 | 198 | 77 | 2.9E-79 | – | |
| Pfam | 130 | 170 | 41 | 5.6E-7 | ||
| PRINTS | 152 | 165 | 14 | 2.9E-5 | – | |
| SMART | 152 | 180 | 29 | 13.0 | ||
| PANTHER | 226 | 345 | 120 | 2.9E-79 | – | |
| PANTHER | 226 | 345 | 120 | 2.9E-79 | – | |
| Phobius | 242 | 262 | 21 | - | – | |
| TMHMM | 243 | 262 | 20 | - | – | |
| Phobius | 263 | 349 | 87 | - | – | |
| Gene3D | 265 | 346 | 82 | 8.8E-12 | – | |
| SUPERFAMILY | 291 | 338 | 48 | 2.63E-8 | ||
| ProSitePatterns | 313 | 335 | 23 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Expression pattern of LotjaGi1g1v0501400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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