Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi1g1v0534600 |
Transcript ID | LotjaGi1g1v0534600.1 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Pentatricopeptide repeat-containing protein family; TAIR: AT1G12700.1 RNA processing FACTOR; Swiss-Prot: sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial; TrEMBL-Plants: tr|A0A072VJ30|A0A072VJ30_MEDTR Pentatricopeptide (PPR) repeat protein; Found in the gene: LotjaGi1g1v0534600 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:106279851..106286884) extracted from Lotus japonicus Gifu genome v1.2.
AGAGAAGCTAGATGGAGAGGATTCAAATCCGTAAAATAAACAACCCCAAATGCACCTCACAGAGCAGCGTAGTGGTAGTC AAGCCGCATTGGCAAATTGAAGCTGAAAACGGCCTCAGAGAATCTCAATTGCTGCAATGTCTTCCTTGTTCAGATTAAAG AGATTTCCCTTTCTTGCTAACCCCACTTTTCTTCTTTCATTTCACTCCCATTTTCATTATGTACCCTCTTCCATTCACAA TGTTGATGATGCTGTCTCACACTTCAACCGCTTGCTCCAAATGCATCCTACCCCTTTCATCATCGAATTTAGTATGATTT TATCTTCCCTACTGAAGATGAAGCATTACTCCACCGCTATATCCCTTTCTCACCAAATGGAACTTAAGGGAATTGCGCCA AACTTTATTACTCTCAGCATATTGATCAACTGTTACTGCCATCTAGGTCAAATCACTTTCGCATTTTCTGTATTGGCCAA CATTCTCAAGAGGGGTTATCACCCAAATACAATCACCTTAAATACACTTATCAAAGGTCTCTGTCTTAAAGGCAAGGTTC GAAGAGCGCTTCGATTTCATGACGATTTGGTGGCACAGGGATTTCGGTTGGATCAATTTAGTTACGCGATCTTGATCAAT GGGTTATGCAAAATGGGAGAAACAAGTGCTGCATTGGAATTGCTTAGAAGGCAATTGGTTAAGCCTGATGTGGTAATGTA CACTACAATCATTGATAGCTTGTGTAAAGATAAACTTGTAAGTGATGCATATGACTTATATTCTGAAATGGTTGCCAAGA GAATTCCACCTAATGCTGTGACTTATACTTCATTGATATATGGCTTTTGCATTGTTGGTCAATTGCAACAAGCGGTTGGT TTGTTAAACGAAATGATTTTGAAACGCATGGACGTGGAAGTTCATACTTTTAATATATTGGTTGATGCTTTATGTAAGGA AGGAAATGTGAAAGAAGCAAAAAATGTGTTTGCTGTGATGATGAAAGAAGGCGTGAAACCTAATATTGTTAGTTATAGTT CTTTGATGGATGGGTATTGTCTAGTTAAGGAAGTAAACAAGGCCAAAGATATATTCAACTTAATGGTCCAAAGGGGAGTG AGTCCTGATGTTCAGAGCTACACTATCGTAATTAATGGTTTGTGTAAGATTAAAATGGTGGATGAAGCCTGGAAACTTTT AGATGAAATGCATTCCGAAAAGATAATTGCTGATACAATATGCTACAATTCTCTTATTGATGGTTTGTGCAAATTAGGGA GAATCTCTGATGCTTGGAAGCTTGTTAATGAGATGCATCATAGAGGTACACCACCTGATGTTATCACTTACAACCCTTTA CTTGATGTTTTATGCAAAAGCCATAATGTTGACAAGGCAATTGCATTAATCAAGGAAATTCAAGATCAGGGTATTAAGCC AGATGTCTTTACATACACTATACTAATTGATGGACTATGCAAAGTAGGAAGACTTAAGGATGCTCAGGAGATTTTTCAGG ATATTTTAATAAAAGGCTACAATGTAACTGTCCAGGCATACACAGTTATGATCAATGGGTATTGCAAAGAGGGCTTGTGT GATGAAGCATTGGCATTGATTTCAAAAATGGAAAGCAGCGGTCGTATGCCTGATGCTGTAACTTATGAAATAATTATTCG AGCTCTTTTTGAAAAAGGTGAGAATGATAAGGGAGAGAAGCTTCTTCGTGAAATGGTTGCTAGAGGTTTACTTTACAACT AGGTAAGTTTCTTTCTAGTTCCATATTAAATTATTTGAAACTTGATTTTCTCCATTCAATCTGTAATTTTTTCAATGATT GTTACACATAAGAAAGAAGATGCCCTACGACTCTCATTTTAGTTTTAATTAAATTTATGTGTTGTTATGTTCCTCTTGCT ATTGCAATGATAACAATGGTCAGTTATTTTAGCCTTGACATGAGTCACATAACTATCCTTTTTCTTCTCAATCTACTGTT GATCTGCTCCCTATATGTATTTTTTTTTTCAGTTGGTGGTCATTGTCAGTTTCTCAGATAACAAACCAAGCTGAAACTGA TTTGATTGTTTGGAATTCTTTACCTCTTACACTTTACTCTATTAATTATCCAAATTAATGATAGTTGAAGTGTATTTTTG TGTTGATGTTTATTTCTTGTTTGTTTGTGCTGATTTAGCTTGTTATCCTTGTGCATGAGCTGTTTTTGGCTTCTGGATCT TCTTATCACTGGTAGAAGTGATTACTTTGGGGAAGCGGTAGGGAGGGAGGTTATTTGCAATGAACATGTTTAGTTTGTCT TATTTTGGGGTTCTGTTGTGGTCGGTGCAAGTTTTATTGTCACTGTTTTGCAGATCAGCTGGAAAATAGGGAGAATGGTG GTCCTAGGTCATGACTTGTTCAGATTTGTCATATGAGCCTTACCTAACAACTTAAGGTTTTGGGATAATTGGTTGTTTGA CATGGTATCAGAGTCTCTGACTAAATGGTCTAGAGTTCGATCCTTTGCCGCCCCCATTATTTAAGTGAAATTTGAGCTCA TGGTAGGTGGACTTGTGCATTGTTCACGCTTCAAGCCCAAGTAGGCTCTTGTGTGAGGGCGCATTTTAGAAATATAGTAT AGAACCATTCATATGGCCCTTTCCCTACAACTTAAGTTTTTGGGATAATTGGTTGTTTGACAAGATTCATGGTATCATGT GCCTTACGAAAATTTCCTTCATCAAATATCAGTGTCATTAAGCTTCTTCAAGTACTATGACTTTGAAATGGATGGTTATG GCCTGCAAACTAATTGCTAAAGATAGGTTGGTTTCTTTGGATGATCTGAGGAGTGTAAAGGCTGAGATTGAGATAATGAG TAGGCTTTCTTGGCACCCAATTGTTGTAGATCTCATGGAACGTTGAAAGAGGAAGGTTTTGTTCTTTAGTATCTTTGTGA GGCAGGAGTGCCATTTCATAGATTAGAGAAGCATGGGCAGTTTTCTGAAATTTGAGCCAGGGTTCACTTTAGGAACCTAA TTTTTTGTCATGCAGATGAGGGGTTTTCATAAAGATTTGATTCTATTTGCTTCATATTATTGATAGTTGAACTTGACTTT TCTTTTGTAGTTTTGTCCTTAGGGGTTTGTGCTGTTTTCACTTGTTATTTTTGTATATGTCCTGTTTTTGGCTTCTGGGT CGTGCTGTTTTTGTAATTTTTAAGTTTATTAAGGATCATTGGTGCCTGTTCACTAGTGTGGTGCAGATTGGAGTTTGTGA CATAAAAATTTATCTTTTTTTTTTTGTTTTCCATTTGAGTTTCTAGTGCAAACATCTTTGCAGAAGCAAGCTTGTCAAAG TTTCTTTTTCTGCCAGATTTTCCCCTTTGCGTTGGACATGATGTTAAACTACTATGTGAGAGTACATGAATGGTTTTAAA TCTAATATGCCCCATCGCACCTGTGGTCTCCTTTCAAAGGGAAGAGTGAAAAACACATGCACATTTTTGTTTGAATCATC TGATTTGTCTTATGTGTTGAAGTTGCTAATATTTCCTTTTTCTATGACTACGGTTTATTTTGGTAGTGAACATTTTAAGA GACTGTTTTCTTGTGATCGTTTAAAATTGACATTCATAAAATAATGAATAAAAGAAATATAAGAAATGTGGATTATCCAA AAGGCTCAGATTTCATTTCTCTTGTTTAGTTATGATTATGATCATTTATAGTCCCTCATTGGAATTGCACTATAAAGATA ATCAGTATTATAACTTTTGAATTATTTACTTGTGCTCTTTTTGAAAGAAAAAAAAAAGCGATAAGGCAAAGCAACTTTTC ATCAAATGGTTGCTCGAAGCTTGCTGAAAGGAAAAAAGAAGATAAACAACTTTAGTGCCATATAAAATACCTGTTTCTGT CACTGTTGAACTTTTATGGTTGGTTTGCATATTTTGTATCTGCTGGGTCAGAGTAATTAAGCTTTATAATGGCCTCACTG CTTCTTATGTTTTGGATGTCTTATGTTTTTTAATTAATTTTGTACTTGATATGGTTGCCATCCTTCACCCCAGGGTAGTT TCAATATTATCTGTTGACTCTTATAATGTTCTTTCCATTTTTTGTTTATAGGGTTAGTGTCTTGATAGTTGCTTTAGTTT GGAGTTCTTGGTTTGTTTCATATGAGATGGTATATTGTCTCTTTTTTAATGAAACAAGCCCAACAAAAATTAAATAGATT GTTACAATTGATTTTATTTCCAGCATTGCTGATCCATTCTGTGATTTTATAACCAATAATAATCCCCATAATCTGGTTTT TGATTGAGCTCAATGGCGTAGGGTGACCCATAAAGCGACCTTACATGGTGGGATAAGACTTTTGTTGTTGTATTGCTGAT CCATTCTGAAGTTAAATGGTTTTTATTTCTACTTACAAACAGATCCAGTCACTAAAATGCCTTCTTTATTACATACTAAA GATTTTTCTGTAACACCTGATATTTCTCTTAACAAAACTTAGTGTTTAAATCAATTTCTTTAGATCAGCTAAAACTTTCG ATTGTCTCAACCAGTTGATGTTTTCATTGCTGCATGCTCCTGAGTTGTAAATTTTGGAAATTTCACTTGATGAAATATTT TTAAAATTATAAAATCAAAAGACTATTCTTCTGACAGTTTTCTGTTTAAACTTAGATGAATTTTCTAAATACAACATGAC ATAGAGTCTACTACTACTATCCCTATAAAAACATGATGAAAAAACCATTATTATCAAACCTAGTTTAGAGTTTTGGTGTC AACAACAGGGAACCACTGTCTTTTAAATTATGGTATTCTCTAGTTCTAATTGCAGATTACACGATCTTTCATCAGTATTT TTAATTTCTTCTCTGCATTTTTATGGCTCTTGTTGTGTTTAGAAAGGATGAAAGGTAAAACACTTCTTTTCGCCTTTGCA GTTACATTTGAATATGAAAGGAATGGTGGTGACAAGGAGAGTATATAATCAATTGGTTAGTTTAAGCTGGTTGTTACTTG TTACCACCTGGAAGAGAAGGCACTGATCTGGAATTTTTCTCAGTTTTTTGCATTTGAAATATTTTTTGTTGCAATTGTCC ACTGTAACTAGAGCTTTGTTCTTTAAAATGCCCCATCATTATTATAATAATTTTAGTTCTTAGTTCCTACCATTCTCCTT CCTCTTGAATATGCTATAACTACGTGGTAAAGTGTAAAATGTTTCAATGACTTCTTTGGTTCAGATTAAGCGTTTAGGTA CAGGACTATTGTCAAAATTGTATACTATGTTGGAGTTACTTTATTTTGCATAGAAGCTCAGGAGGTTCTTATCTTTTATT CGGTTGAATTTACAAATTGATATCGCAATATTATTATATTAGAAAGAGCGAATTTATCTTTAAATTGCTATAGCAATTTT CAAATTGTTGCTATAGTCATTTTTTGAATTCAAGATGTGTTTCTATGAAATATATTTATTTTCAGATATAAGCTAGTTGT GCACATCATTGCATCTTCATTTTTTCTCACTTTCATCATTGATTTTCCCCAACAATATAGTGATTGATGGAATGTGTCGA GCTGGGAAACTGAATGATGCATGAGAGCTCGTCTTCTAGCTAAATGGTTACAAATTAATGTTTATAATTATACTTATATA CCATGGTCAATTTAAAAGGACTATTAGATGATACTGAAAACCTAGACTTGTGAATGTGGATGAGAATTGCCGCTGTCTTC TAAATGCACTTATCATGTCTGTGTTCAAGGATTTCTGATATATGCTTGGCATGACTTGGTTAAAGATTTGAATAAGGAAG TGCTGTGTACAAAACCTTCTCTAAAGCTCACTGCCCCGGAGGTTTTAGGTAAGTTTACTTCTTTTTCTTTTTTCCCCACC CCCACTGTCAATGACCCATTTGCTTGAGAGAGAACTGATCATTTAACTGTTGAATGAGCTTGAGCTTCTGAATGAAGGAA ATCGCTTCTGGTGATGATTTCATCCGCATTGATCAACATATAAATAAATAATCCAGAGTTAGAAAGCACCAAAAGTGAAG GATCACATTTGCAAGTAGTGAACTCCAAGTGAATTAGAGCTGTTGTCAACCTTTCAAAACAGGTCCGAGGAGCCTGTTTT GTTTTAGGCCATAAAGAGCCTTATGCAACTTACAAACCATGCTCTTGTCAGTTTCACCATTGCATGTATACTTCTTCCTC AAGAATGCCATTTGAAAAGGCATTGTTGACATCCAGCTGCTGTATAGGCCATTGTTGTGTTAAAGCAAGGGTGAGAACAA CCTGAACAATAATAGGTTTGGTAACTGTACTAAAAGTTTCAGTATAGTCAAACTCGTGTTGTTGATGAAACCCTTTTGCA ACAAGATGAGACTTGTATTTATTGACTGATCCATCGGGAATTTCCTTAATCTTGAATTCCCACTTGCATCGATCTAATAG CCTCTCTAAGTGGAGGAAGAGAATCTAATGACCAAGTCTTGTTATTAATCAATGCATCATACTCACTTTTCATAGCTGCA ACCCATTGGGGATGAGCAAGAGTCTGTTTCACAGTAGCAGGTTCTATTTGAGCATTTAAGAGTGTGGGGGTGAAGTATGG AAACAATTCCAAACTTGGACATAGTTTGCATTGGATGATTATTTAAAACAGGAACCAGGTGAGTCGAAGGGGCACAGTCC CAATATCTAGTAGGCATAGAAGCATGAGCAAGCAAAGATAAATACAATTCTACAATATGTCTATGCTTGCGTTCACATTT TGTTGATGAGTATAAGGACAAATTAGCCTGTGTGATATGCCAAAATTCTTGAGAACTCTCCCCCTCCCCCAATCTGTTTG TACGGATTTAATTTTAGTGTTTAATTGCAGCTCAAAAGAAGATTTAATCTCTTACCCTTAAATGCGAGTCATCGCCACAT TACCATATTCCCTCTACGGAAGTACTGATGTTATCCATACTTGTAGCGTCGTTCGCTTCACCGTGTCAACGAGA
CDS sequence (LotjaGi1g1v0534600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTTCCTTGTTCAGATTAAAGAGATTTCCCTTTCTTGCTAACCCCACTTTTCTTCTTTCATTTCACTCCCATTTTCA TTATGTACCCTCTTCCATTCACAATGTTGATGATGCTGTCTCACACTTCAACCGCTTGCTCCAAATGCATCCTACCCCTT TCATCATCGAATTTAGTATGATTTTATCTTCCCTACTGAAGATGAAGCATTACTCCACCGCTATATCCCTTTCTCACCAA ATGGAACTTAAGGGAATTGCGCCAAACTTTATTACTCTCAGCATATTGATCAACTGTTACTGCCATCTAGGTCAAATCAC TTTCGCATTTTCTGTATTGGCCAACATTCTCAAGAGGGGTTATCACCCAAATACAATCACCTTAAATACACTTATCAAAG GTCTCTGTCTTAAAGGCAAGGTTCGAAGAGCGCTTCGATTTCATGACGATTTGGTGGCACAGGGATTTCGGTTGGATCAA TTTAGTTACGCGATCTTGATCAATGGGTTATGCAAAATGGGAGAAACAAGTGCTGCATTGGAATTGCTTAGAAGGCAATT GGTTAAGCCTGATGTGGTAATGTACACTACAATCATTGATAGCTTGTGTAAAGATAAACTTGTAAGTGATGCATATGACT TATATTCTGAAATGGTTGCCAAGAGAATTCCACCTAATGCTGTGACTTATACTTCATTGATATATGGCTTTTGCATTGTT GGTCAATTGCAACAAGCGGTTGGTTTGTTAAACGAAATGATTTTGAAACGCATGGACGTGGAAGTTCATACTTTTAATAT ATTGGTTGATGCTTTATGTAAGGAAGGAAATGTGAAAGAAGCAAAAAATGTGTTTGCTGTGATGATGAAAGAAGGCGTGA AACCTAATATTGTTAGTTATAGTTCTTTGATGGATGGGTATTGTCTAGTTAAGGAAGTAAACAAGGCCAAAGATATATTC AACTTAATGGTCCAAAGGGGAGTGAGTCCTGATGTTCAGAGCTACACTATCGTAATTAATGGTTTGTGTAAGATTAAAAT GGTGGATGAAGCCTGGAAACTTTTAGATGAAATGCATTCCGAAAAGATAATTGCTGATACAATATGCTACAATTCTCTTA TTGATGGTTTGTGCAAATTAGGGAGAATCTCTGATGCTTGGAAGCTTGTTAATGAGATGCATCATAGAGGTACACCACCT GATGTTATCACTTACAACCCTTTACTTGATGTTTTATGCAAAAGCCATAATGTTGACAAGGCAATTGCATTAATCAAGGA AATTCAAGATCAGGGTATTAAGCCAGATGTCTTTACATACACTATACTAATTGATGGACTATGCAAAGTAGGAAGACTTA AGGATGCTCAGGAGATTTTTCAGGATATTTTAATAAAAGGCTACAATGTAACTGTCCAGGCATACACAGTTATGATCAAT GGGTATTGCAAAGAGGGCTTGTGTGATGAAGCATTGGCATTGATTTCAAAAATGGAAAGCAGCGGTCGTATGCCTGATGC TGTAACTTATGAAATAATTATTCGAGCTCTTTTTGAAAAAGGTGAGAATGATAAGGGAGAGAAGCTTCTTCGTGAAATGG TTGCTAGAGGTTTACTTTACAACTAG
Protein sequence (LotjaGi1g1v0534600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSSLFRLKRFPFLANPTFLLSFHSHFHYVPSSIHNVDDAVSHFNRLLQMHPTPFIIEFSMILSSLLKMKHYSTAISLSHQ MELKGIAPNFITLSILINCYCHLGQITFAFSVLANILKRGYHPNTITLNTLIKGLCLKGKVRRALRFHDDLVAQGFRLDQ FSYAILINGLCKMGETSAALELLRRQLVKPDVVMYTTIIDSLCKDKLVSDAYDLYSEMVAKRIPPNAVTYTSLIYGFCIV GQLQQAVGLLNEMILKRMDVEVHTFNILVDALCKEGNVKEAKNVFAVMMKEGVKPNIVSYSSLMDGYCLVKEVNKAKDIF NLMVQRGVSPDVQSYTIVINGLCKIKMVDEAWKLLDEMHSEKIIADTICYNSLIDGLCKLGRISDAWKLVNEMHHRGTPP DVITYNPLLDVLCKSHNVDKAIALIKEIQDQGIKPDVFTYTILIDGLCKVGRLKDAQEIFQDILIKGYNVTVQAYTVMIN GYCKEGLCDEALALISKMESSGRMPDAVTYEIIIRALFEKGENDKGEKLLREMVARGLLYN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Phobius | 1 | 11 | 11 | - | – | |
Phobius | 12 | 29 | 18 | - | – | |
Phobius | 30 | 48 | 19 | - | – | |
Gene3D | 31 | 185 | 155 | 3.4E-32 | ||
PANTHER | 33 | 184 | 152 | 8.3E-193 | – | |
PANTHER | 33 | 184 | 152 | 8.3E-193 | – | |
SUPERFAMILY | 35 | 465 | 431 | 3.57E-10 | ||
Phobius | 49 | 66 | 18 | - | – | |
ProSiteProfiles | 54 | 88 | 35 | 7.278 | ||
Pfam | 58 | 102 | 45 | 1.8E-7 | ||
Phobius | 67 | 86 | 20 | - | – | |
Phobius | 87 | 114 | 28 | - | – | |
ProSiteProfiles | 89 | 123 | 35 | 9.778 | ||
TIGRFAM | 92 | 125 | 34 | 3.3E-5 | ||
Phobius | 115 | 541 | 427 | - | – | |
Pfam | 123 | 172 | 50 | 2.7E-12 | ||
ProSiteProfiles | 124 | 158 | 35 | 10.567 | ||
TIGRFAM | 126 | 159 | 34 | 3.7E-5 | ||
ProSiteProfiles | 159 | 189 | 31 | 8.649 | ||
TIGRFAM | 161 | 185 | 25 | 2.0E-4 | ||
Gene3D | 186 | 255 | 70 | 2.0E-20 | ||
PANTHER | 187 | 360 | 174 | 8.3E-193 | – | |
PANTHER | 187 | 360 | 174 | 8.3E-193 | – | |
Pfam | 190 | 238 | 49 | 2.9E-17 | ||
ProSiteProfiles | 191 | 225 | 35 | 11.718 | ||
TIGRFAM | 193 | 227 | 35 | 1.9E-8 | ||
ProSiteProfiles | 226 | 260 | 35 | 9.756 | ||
TIGRFAM | 228 | 255 | 28 | 1.1E-4 | ||
PANTHER | 245 | 414 | 170 | 8.3E-193 | – | |
PANTHER | 245 | 414 | 170 | 8.3E-193 | – | |
Gene3D | 256 | 323 | 68 | 3.1E-20 | ||
Pfam | 261 | 288 | 28 | 2.6E-8 | ||
ProSiteProfiles | 261 | 295 | 35 | 12.978 | ||
TIGRFAM | 263 | 297 | 35 | 4.7E-10 | ||
Pfam | 295 | 344 | 50 | 8.2E-17 | ||
ProSiteProfiles | 296 | 330 | 35 | 12.057 | ||
TIGRFAM | 298 | 332 | 35 | 1.1E-9 | ||
Gene3D | 324 | 395 | 72 | 4.4E-24 | ||
ProSiteProfiles | 331 | 365 | 35 | 11.509 | ||
TIGRFAM | 334 | 366 | 33 | 1.2E-9 | ||
PANTHER | 347 | 484 | 138 | 8.3E-193 | – | |
PANTHER | 347 | 484 | 138 | 8.3E-193 | – | |
ProSiteProfiles | 366 | 400 | 35 | 13.471 | ||
Pfam | 366 | 393 | 28 | 1.6E-10 | ||
TIGRFAM | 368 | 402 | 35 | 4.4E-11 | ||
PANTHER | 396 | 538 | 143 | 8.3E-193 | – | |
PANTHER | 396 | 538 | 143 | 8.3E-193 | – | |
Gene3D | 396 | 464 | 69 | 4.2E-24 | ||
Pfam | 400 | 449 | 50 | 1.3E-17 | ||
ProSiteProfiles | 401 | 435 | 35 | 12.277 | ||
TIGRFAM | 403 | 437 | 35 | 1.5E-8 | ||
ProSiteProfiles | 436 | 470 | 35 | 11.762 | ||
TIGRFAM | 438 | 468 | 31 | 1.9E-5 | ||
Gene3D | 465 | 536 | 72 | 3.9E-17 | ||
ProSiteProfiles | 471 | 505 | 35 | 12.068 | ||
Pfam | 472 | 517 | 46 | 1.6E-12 | ||
TIGRFAM | 474 | 506 | 33 | 2.2E-7 | ||
ProSiteProfiles | 506 | 540 | 35 | 10.128 | ||
TIGRFAM | 508 | 539 | 32 | 4.5E-4 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi1g1v0534600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…