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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0597700 |
| Transcript ID | LotjaGi1g1v0597700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Dynamin, putative; TAIR: AT3G60190.1 DYNAMIN-like 1E; Swiss-Prot: sp|Q9FNX5|DRP1E_ARATH Dynamin-related protein 1E; TrEMBL-Plants: tr|I1KYV5|I1KYV5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0597700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:113727320..113734554) extracted from Lotus japonicus Gifu genome v1.2.
CAAAAACATTACTACCATTTTACTTTCGTTACATCATTATAGGATAAAGACCAAAAACGGTGCGCAGCGGCTATATCCTC GCAGCACGCATGTCTGTGTCTGTCTAGTCAAGTGGTCACACTTTGTTCAAACAGCATAAGCCGCAACTAGACACTCTCTC TCTCTGCAGAATTTGTGTGCGTTTCGACAGCGTTAATAGCGTCCAACGTCGTCGTTTTCATCTAGGGTATTCGAAGAAGA TGACTACTACCATGGAGAGCTTGATTGGGTTGGTGAACCGAATTCAGAGGGCTTGCACTGTGCTTGGTGACCATGGAGCT GCTGCCGATGGCAACTCCTTCTCTTCTCTCTGGGAAGCTCTCCCTACTGTTGCTGTTGTTGGTGGCCAGGTACCACCTTC TCCTACTCCAACCTTTCAATTCAACCTCTTTTCTATGCTTCCTGTCTTCCATTTTCAATTGTTCTTTTCAATTTGAGCAG AGTTCAGGGAAGTCTTCAGTTTTGGAGAGCATTGTTGGCCGTGACTTTCTGCCTAGAGGCTCAGGTTTGCTGTGTTCTTT TTCTCTTTTGTTTTGACATTTTTCTTCTCATTTTATTAAGTATCATTTGCTCATGTTTTTACAGGGATTGTGACAAGGCG TCCATTGGTGTTGCAGTTGCATAAGCTGGAAACTGGGTCACAAGAGTATGCAGAGTTTCTTCATATGCCAAGGAGAAAGT TCACTGATTTTTGTATGACTCTAACCTTTTCCTCACATAGTCACATATACTATAATTTAATTCGACGTTTTAACTGATTA TATGATAGCTTCCTTCTCGTGTTTGCGTTTGCTCATAAAATAATTTGAGTGTGTTACCAAATAATTTGATAGGCAAATGT TAGTTGTTAGTAATATTAGTAAATGAGTCCCTCCTCAGGGTTCGAACCCTGGACCCTTCACCCTTCATCCCACCCAACCC TTATGTCCCCTAGCTGTTAGTTGTTACTTGTTACCTAGCTTTTGTTTGTTTCCTACTGTCTGTTACTTCTCTTTTTCCCT GATAGTACTAGAGCTATCCTCATTTGTTCCTATGGTAATGAAAAATTATTTGTATGTTCAAGAAATTTAAATTTTTCTAT GTTTTAACTGATTATATCATAGCTTCGGCCTTGTGTTTGCTCATAACATAATTTTGAGTGTGTTACTAAATTCTGTGCTG GTGCCTGGTAGTGTCTACATTCGTTATTGGCTAGCAATTTATCATGTGAATATGTGATAATTACAACACTGGCTACTAGT ATCTTGGTTTTTGGATTTTGTAAGCAATTGAATTTTTTGTTGCATATTATGTAAATGATCTGCTTTTTACACAATCTGCT TTTCCTATTGCAGCCTTGGTCCGCCAGGAAATTCAGGATGAAACTGATAGAGTAACAGGGAAGACAAAACAAATATCTCC TATTCCAATTCATCTTAGCATCTATTCTCCAAATGGTGCGCTTCATTTTTTTCACACTCGTCTTTTCTGAGAGCATTTAA GCTAGAGGGTTAAGTGTTTGTTGTGTAAATTAAAATCAATTATATAATATATATTTGAACTAGTTTTACATATAACTAGT TTATCTAAATTTTGTTTTGAATACTTTAATTCCAAGTATTGCTTCATAGTAGAATATTAGAGTTATTGCACTATTAGTAT TAGCACTTGACCAAATTATTAATATAAATAAACAGGAACATTAGGTTAATGTATCCTATCACGTCAAATTCTCAATCATA TATTCTATATTTAGTCTCTCCCTATTTCTCCTCCTTCACATAAACTATAGTTTCGGTATTTGAGAACACTAAAGACTGCT TATGTATAAACCAAATTAGTATTGGATTTGTTTTGAACTATTTATGACCTGAAAACAAAGGAATAGTTTTATAATTTCAA GAAATTACCAAATACATAAGAATCAAAAACAGCAGCATTGCAGCTATTTATCAGTTTTGGTGGTTGCTGAACAAAATCCT TAATTTGGTGGTTTTTTTTTTTTTTTTTTTGTTAATTTAGCTAAGTGTTTTCAAATAAGCATTCCTTTGCAGTATTTCTG TATAGCACTAAATGAGACTAATAAATCTGTAATTCGAAGTTCTATATTTTTTATAATTCTTGTGTTTCCTAACTAATTTT CTAGCTTTTCCTGTTTGTTTTTTCAACAGTTGTCAACCTAACCTTGGTTGATTTACCGGGGCTAACTAAAGTTGCTGTAG GTATGCTTTTCTTTTAATTGTTAATTATAAATCAATGATCAATTATTTGGATGAAACAACACTTATTTCATTTTTTTAGT TTCTATAAATGTGTCTATCTTTTTCAGAGGGACAGCCTGAGAGTATTGTTCAAGAAATTGAAACTATGGTTCGCACTTAT GTTGAGAAGGTAAAATAAGTTTTTCTCTAATGCAATGAATTTATAAAGGGTAGAGCAACCTTCTCCCTTAAGCTTGATTA GGTTGAGGGTTGCTCAACCCTTTTATAAGGACTATTTTGTCCATATCTCTATTCAATGTGGGACTTTTCAACAGTACTGA TATCTGAAATATTATATGAGCATATTTCTAATCTATTACATAATTATATAAGGACTATTTTCGTATATCCTAATCTATTA CATAATTTTTTACGTATAGTTTGTCGATATACTGCTAGAACTATTAAATTCAATTTTTCCCCCTTATTGAAGCATTTTAA AAAACAAATGGGATTACTATACGAGCTCTACACCAAAAGTTTATATTTTCTTTAAGCAATTGCTTTATGTTCAACAGCCT AATAGTATCATACTGGCAATATCCCCGGCCAACCAAGACATAGCAACTTCTGATGCTATTAAACTTGCTAGGGAAGTTGA TCCCACAGGTAGTTTCTAAATGCTTCTTGGAATAGCCAATTATTGCCCTTTCTCATGTCATAGTTTTGTACTGAAATCCT TATCTATCACCTAGGTGAAAGGACATTTGGGGTGTTGACAAAGCTAGATTTGATGGACAAAGGAACTAATGCTTTGGATG TAATCTCTCTCTCCCCCTGCTCTTGTTTGAGTTGTTGCCTATGCCTTTGATGTTCAATTTTGAAGTGTGCCTGTAAGATT GTATAACTGCTTTGGCTTCTTGCCCACTTTTATTCCCTGAAGGTCCTTGAAGGAAGGTCTTATCGGCTGCAACATCCTTG GGTTGGTATAGTAAATCGATCTCAGGCGGACATCAATAAAAATGTTGATATGATTATTGCTAGACGCAAGGAGCGCGAGT ATTTTGCAAATAGTCCTGATTATGGGCACTTGGCCAATAAAATGGGTTCAGAATACCTTGCAAAACTTCTCTCACAGGTT TCCATTTCAAAATATGTTATTTTCCGATCTTTTCTGAGATACCCTATCATTTTAATCATGTGAGCTTATTTCTGTAGCAC TTGGAGTCAGTAATTAGGGCAAGGATACCTAGTATAACATCTTTAATAAACAAAAGCCTTGAGGAACTGGAATCAGAGAT GGATCATCTTGGGAGGCCTATTGCTCTTGATGCCGGGGTATGTGGTTTCTACTTGTAATGATTTCTTAGCTTCTTGCGGA ATAAAGTTATTTCTGAGGTCTCCTCATGATTATTTTCTGAATGTTAATTTCTGTTTCAGGCTCAACTATACACCATTCTA GAACTTTGCCGAGCATTTGAACGGATATTCAAGGAGCATTTAGATGGAGGGTAATATCTTGTACTGTTTTCTACTCTTGT GCCGTGTTTGTCAAACTTGAAGATCCCACCTGGGATTGGATAAGGGATATAAATGTATTAACTGTGAAATCATAAAACGG AACATAAGATCTTTCATCAAAATTGGAATAAAAAATTTCATACATATCACCATAATAGTGTTATAAATTGTATCAAATAA CAGTGCCTCCATAATGGAGCCTTGCATTGGGAGGTCTATCACTCATTTGCATAGTGTTTTGGTGTTGCAGCTACTGTGGC ATGAATTGCGATGATGGTACAGCCCAAATCTTGAGTTGTGTTGTGATGCTTCTGCAGAGATTGAAACTCTGCTTTTCATT TGTTTTTTAATAAGATTCCTTTTTAACCCTCACTCACACTTACCAAACTTCTTTTTCTCCATCACTAAAACTAAGGTGTT AAGTTACCTTCACTCAAATGAAATATGTATTTATTTTGTGTTCTCCAACCCATCATCCAACTTCAAGAATTTGCGGCAGC TCCTTGATGCTCCCCAAACCGAGCTGCCTCTGCTGTGTCTTTTACAAGCAAGAAAAATATGTCTTCTGTCCTCACTGTCA ACAACCAATTGCCAGGAAAGCTTAAACATATGTATGTTTTGAACACTCAAAAGGCTGCTGTGTTCTACACCTATTTAACA GCCATTTGTCCTCTCCTAGTCAAAAATATTTTCAGCAATTAAAAAAAACTGTGATGCAGCTTACCCGCTGCATAATGTTA AAATGCATAGCCAAAGCAATTTGAAATGACTTTTTGGATGTCAGTTTGTAATCACTGATGAACTCGTTGATAGGTCTCTT TGTTAACGGCATGTCTTTCTTTTGAATTGTTAGGCGGCCAGGAGGAGATAGGATATATCATGTCTTTGACAATCAGCTTC CTGCTGCTTTACGAAAGCTTCCATTTGACCGACATCTTTCTCTCCAGAATGTAAGGAAAGTGGTCTCAGAGGCTGATGGT TATCAGCCTCACTTGATTGCCCCAGAGCAAGGTTACCGGCGCCTGATTGACTCGGCTCTCAGTTACTTTAGAGGCCCAGC TGAAGCTTCAGTAGATGCTGTATGCTGCCTGATTTTATTCTCTTGATTATTGATTTTCTTCTAAGTCACAATTTGAGCTG GTTATTCGTGATTGTTTTCTAGGTTAATTTTGTGTTAAAAGAACTTGTGAGGAAATCAATAGCTGAAACTAAGGTAAGAT TCGTAGTTTATTTTGTAATAGCCTTGTTCATGAACTGAAAGGATTACTCGTGACACTAATATGTAACTGAGCAGGAACTC AAGCGCTTCCCAACTTTTCAAGCTGCACTAGCTACAGCCGCAAATGAGGCTTTAGAAAGGTTTCGTGAAGAGAGTAAGAA GACAACTCTCCGGCTTGTAGATATGGAATCTTCGTATCTCACTGTGGATTTCTTCCGGAGACTTCCTCAGGAAGTGGAAA AAGCTGGAGGTCCTGCTACCCCAAATGTTGACCGATATGCAGAGGGGCATTTCAGAAGAATTGCATCAAATGTTTCTTCC TATATAGGGTTGGTGGCAGACACGCTTAGGAACACAATACCGAAGGCTGTGGTTTTCTGTCAGGTCAGACAAGCTAAACA GTCTTTGCTAAACCATTTCTACACACAAATAGGGAAGAAAGAGGTATGTTGTCTCTAGCTCTCACTGTGTCTGTTTATCG CTTTATATTGTATGAACATGAGTATTTGTGTGAAGCCTAACTTGACTGGAGCTTAATCCAGATTGACTTTCAAACCTCTC AAGTATCTAATTTTATTTGTCTTTGGGATATGTTTTTTATTAGCATTCACCTTTTATGGTAACAAACTAATACAATTGTT TGGAGTAGTGCAATACTTATGAGGACAATCTGTACGTACAATTATCTTTTTCTACATTGTAGGGTCCAAGTTGGTAACTA CACTGTGCCATTGCTGTATATGATAAATGATAGTAATTTACTTCTAAGTTTATGTCCTAAGAGCATCTTCAATGGAGGTC CTTTTATTTTTTCCCGTTGGAGAAGACTGAGCTGGAGTTCTTGAAAATAAGGTCCCGTCGCTTCTGCAAGCAAATTTGCT TTTTGAGTTCTTTGATTAAAAAAATAGATTTTATCTCTCATTCATCAACTGCTTATATAAATATGAGGTATTGCGAGACC CAACCAAAAGTAAAATAAGAACTCGTGGTTGGAGCAAAATTTGCATCAGTTGCTTATATCCTATGTGGCACTTTGGGCCC CCACATGAACAATGCTAAGAACTCAAAATAAGAATTCATGGATGGAGATGCTCTAAGGGTATTTTGGGCATAGAATTAAA TTAGTATTGCCAAATTATTTTTGTGGATACGGTGCTTCTGGTTTGATGAGAATTTGTCATCTTATGCTTGATAAACTCAT CCTCTTCTAGTTTGATTTTTAGGACAAAATGTGTGTATAACTTTATATCCTATAATAATCCACACCATGTTGCACTTTAT TATGCATCATCTGTTTTACATGGTTTCAATATATATCCTTACGGAGATTTTACACGCTGTAGGGCAAACAGCTATCAGAA ATGTTAGATGAAGACCCTGCATTAATGGAGAGGAGGCAACAGTGTGCAAAAAGGCTTGAACTATATAAAGCAGCAAGGGA TGAAATTGATTCTGTTTCTTGGGTACGATGAGCTTGGGTCTTCCTCACCTTGTACTGCACTGTAAAACTGGTAGCAACCA ATTATGAAGTTGGCTGGACCCAGAATCCGAGATGTAGTTTACATATTTTATTTAGTAGTATTGTTTTATTTTTATCGGAA TTTTATGCCTTTTCATTGATTGTAGGATAACATTGGAGTTGTTTGTGTGAATGTGTGTTGTACATCCTTACGGACCCCTA ACTTCATTGCCAATATGTAAAATAAGTTTGCATATTTACTCTTTAATCACCTTTTCTAGGTTGTGTTTCCTTGAACTATT TGTTTCAATATTTGTTTACTTTCCCTTTCTGGATACTCAAAACTGTAGGAACGTATGAAAGAAACAGAGAAAATCTGATT GGAAGAGTTAAAACTGGGAACTTATATACTCTGCAGTCTGCACTACATAGAGTATTTAAAAACAAAAACATAACTGAAAC ACCACTAAATAGGAACTACTCATGATCTGGTTAACTGATTAGTTACCCCACTACCTCCTAAAACGGAATTATTTTACAAT GTCTCCCTTAAAATGCAAAATCTTCAATTTTGCAGCACACGAACACCGAATAATCTTCTAAGCTTTGCAAATGACTCCAT CTCGAGTGCCTTGGTGAATATATCTATCTTCACTTCTGCAGTATACCAGATCAGATGTTGAGAGTAATAAAAAACAAGTG ATAATGGAGAGCAATATAAGAGTGGCTGAAGAAGTTGAAGGATGTTGGGCGTGCGACTCATGAAAATGAAGTCACGATGG AGCATAATGGAAGTGTCTGGTCAAAATTAAGTGAT
CDS sequence (LotjaGi1g1v0597700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTACTACCATGGAGAGCTTGATTGGGTTGGTGAACCGAATTCAGAGGGCTTGCACTGTGCTTGGTGACCATGGAGC TGCTGCCGATGGCAACTCCTTCTCTTCTCTCTGGGAAGCTCTCCCTACTGTTGCTGTTGTTGGTGGCCAGAGTTCAGGGA AGTCTTCAGTTTTGGAGAGCATTGTTGGCCGTGACTTTCTGCCTAGAGGCTCAGGGATTGTGACAAGGCGTCCATTGGTG TTGCAGTTGCATAAGCTGGAAACTGGGTCACAAGAGTATGCAGAGTTTCTTCATATGCCAAGGAGAAAGTTCACTGATTT TTCCTTGGTCCGCCAGGAAATTCAGGATGAAACTGATAGAGTAACAGGGAAGACAAAACAAATATCTCCTATTCCAATTC ATCTTAGCATCTATTCTCCAAATGTTGTCAACCTAACCTTGGTTGATTTACCGGGGCTAACTAAAGTTGCTGTAGAGGGA CAGCCTGAGAGTATTGTTCAAGAAATTGAAACTATGGTTCGCACTTATGTTGAGAAGCCTAATAGTATCATACTGGCAAT ATCCCCGGCCAACCAAGACATAGCAACTTCTGATGCTATTAAACTTGCTAGGGAAGTTGATCCCACAGGTGAAAGGACAT TTGGGGTGTTGACAAAGCTAGATTTGATGGACAAAGGAACTAATGCTTTGGATGTCCTTGAAGGAAGGTCTTATCGGCTG CAACATCCTTGGGTTGGTATAGTAAATCGATCTCAGGCGGACATCAATAAAAATGTTGATATGATTATTGCTAGACGCAA GGAGCGCGAGTATTTTGCAAATAGTCCTGATTATGGGCACTTGGCCAATAAAATGGGTTCAGAATACCTTGCAAAACTTC TCTCACAGCACTTGGAGTCAGTAATTAGGGCAAGGATACCTAGTATAACATCTTTAATAAACAAAAGCCTTGAGGAACTG GAATCAGAGATGGATCATCTTGGGAGGCCTATTGCTCTTGATGCCGGGGCTCAACTATACACCATTCTAGAACTTTGCCG AGCATTTGAACGGATATTCAAGGAGCATTTAGATGGAGGGCGGCCAGGAGGAGATAGGATATATCATGTCTTTGACAATC AGCTTCCTGCTGCTTTACGAAAGCTTCCATTTGACCGACATCTTTCTCTCCAGAATGTAAGGAAAGTGGTCTCAGAGGCT GATGGTTATCAGCCTCACTTGATTGCCCCAGAGCAAGGTTACCGGCGCCTGATTGACTCGGCTCTCAGTTACTTTAGAGG CCCAGCTGAAGCTTCAGTAGATGCTGTTAATTTTGTGTTAAAAGAACTTGTGAGGAAATCAATAGCTGAAACTAAGGAAC TCAAGCGCTTCCCAACTTTTCAAGCTGCACTAGCTACAGCCGCAAATGAGGCTTTAGAAAGGTTTCGTGAAGAGAGTAAG AAGACAACTCTCCGGCTTGTAGATATGGAATCTTCGTATCTCACTGTGGATTTCTTCCGGAGACTTCCTCAGGAAGTGGA AAAAGCTGGAGGTCCTGCTACCCCAAATGTTGACCGATATGCAGAGGGGCATTTCAGAAGAATTGCATCAAATGTTTCTT CCTATATAGGGTTGGTGGCAGACACGCTTAGGAACACAATACCGAAGGCTGTGGTTTTCTGTCAGGTCAGACAAGCTAAA CAGTCTTTGCTAAACCATTTCTACACACAAATAGGGAAGAAAGAGGGCAAACAGCTATCAGAAATGTTAGATGAAGACCC TGCATTAATGGAGAGGAGGCAACAGTGTGCAAAAAGGCTTGAACTATATAAAGCAGCAAGGGATGAAATTGATTCTGTTT CTTGGGTACGATGA
Protein sequence (LotjaGi1g1v0597700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTTTMESLIGLVNRIQRACTVLGDHGAAADGNSFSSLWEALPTVAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLV LQLHKLETGSQEYAEFLHMPRRKFTDFSLVRQEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLVDLPGLTKVAVEG QPESIVQEIETMVRTYVEKPNSIILAISPANQDIATSDAIKLAREVDPTGERTFGVLTKLDLMDKGTNALDVLEGRSYRL QHPWVGIVNRSQADINKNVDMIIARRKEREYFANSPDYGHLANKMGSEYLAKLLSQHLESVIRARIPSITSLINKSLEEL ESEMDHLGRPIALDAGAQLYTILELCRAFERIFKEHLDGGRPGGDRIYHVFDNQLPAALRKLPFDRHLSLQNVRKVVSEA DGYQPHLIAPEQGYRRLIDSALSYFRGPAEASVDAVNFVLKELVRKSIAETKELKRFPTFQAALATAANEALERFREESK KTTLRLVDMESSYLTVDFFRRLPQEVEKAGGPATPNVDRYAEGHFRRIASNVSSYIGLVADTLRNTIPKAVVFCQVRQAK QSLLNHFYTQIGKKEGKQLSEMLDEDPALMERRQQCAKRLELYKAARDEIDSVSWVR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 617 | 615 | 0.0 | – | |
| PANTHER | 3 | 617 | 615 | 0.0 | ||
| SMART | 5 | 258 | 254 | 1.3E-113 | ||
| Gene3D | 6 | 326 | 321 | 2.0E-116 | – | |
| SUPERFAMILY | 35 | 315 | 281 | 3.01E-74 | ||
| ProSiteProfiles | 38 | 307 | 270 | 57.63 | ||
| PRINTS | 41 | 59 | 19 | 1.1E-59 | ||
| CDD | 41 | 307 | 267 | 2.46064E-134 | ||
| Pfam | 44 | 219 | 176 | 1.4E-54 | ||
| PRINTS | 66 | 83 | 18 | 1.1E-59 | ||
| ProSitePatterns | 67 | 76 | 10 | - | ||
| PRINTS | 139 | 156 | 18 | 1.1E-59 | ||
| PRINTS | 189 | 207 | 19 | 1.1E-59 | ||
| PRINTS | 208 | 224 | 17 | 1.1E-59 | ||
| Pfam | 229 | 495 | 267 | 2.1E-59 | ||
| PRINTS | 231 | 250 | 20 | 1.1E-59 | ||
| Gene3D | 333 | 583 | 251 | 7.1E-54 | – | |
| SMART | 520 | 613 | 94 | 9.8E-33 | ||
| Pfam | 522 | 613 | 92 | 1.5E-24 | ||
| ProSiteProfiles | 525 | 617 | 93 | 22.927 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi1g1v0597700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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