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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0597700 |
| Transcript ID | LotjaGi1g1v0597700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Dynamin, putative; TAIR: AT3G60190.1 DYNAMIN-like 1E; Swiss-Prot: sp|Q9FNX5|DRP1E_ARATH Dynamin-related protein 1E; TrEMBL-Plants: tr|I1KYV5|I1KYV5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0597700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:113727562..113733750) extracted from Lotus japonicus Gifu genome v1.2.
ACTACTACCATGGAGAGCTTGATTGGGTTGGTGAACCGAATTCAGAGGGCTTGCACTGTGCTTGGTGACCATGGAGCTGC TGCCGATGGCAACTCCTTCTCTTCTCTCTGGGAAGCTCTCCCTACTGTTGCTGTTGTTGGTGGCCAGGTACCACCTTCTC CTACTCCAACCTTTCAATTCAACCTCTTTTCTATGCTTCCTGTCTTCCATTTTCAATTGTTCTTTTCAATTTGAGCAGAG TTCAGGGAAGTCTTCAGTTTTGGAGAGCATTGTTGGCCGTGACTTTCTGCCTAGAGGCTCAGGTTTGCTGTGTTCTTTTT CTCTTTTGTTTTGACATTTTTCTTCTCATTTTATTAAGTATCATTTGCTCATGTTTTTACAGGGATTGTGACAAGGCGTC CATTGGTGTTGCAGTTGCATAAGCTGGAAACTGGGTCACAAGAGTATGCAGAGTTTCTTCATATGCCAAGGAGAAAGTTC ACTGATTTTTGTATGACTCTAACCTTTTCCTCACATAGTCACATATACTATAATTTAATTCGACGTTTTAACTGATTATA TGATAGCTTCCTTCTCGTGTTTGCGTTTGCTCATAAAATAATTTGAGTGTGTTACCAAATAATTTGATAGGCAAATGTTA GTTGTTAGTAATATTAGTAAATGAGTCCCTCCTCAGGGTTCGAACCCTGGACCCTTCACCCTTCATCCCACCCAACCCTT ATGTCCCCTAGCTGTTAGTTGTTACTTGTTACCTAGCTTTTGTTTGTTTCCTACTGTCTGTTACTTCTCTTTTTCCCTGA TAGTACTAGAGCTATCCTCATTTGTTCCTATGGTAATGAAAAATTATTTGTATGTTCAAGAAATTTAAATTTTTCTATGT TTTAACTGATTATATCATAGCTTCGGCCTTGTGTTTGCTCATAACATAATTTTGAGTGTGTTACTAAATTCTGTGCTGGT GCCTGGTAGTGTCTACATTCGTTATTGGCTAGCAATTTATCATGTGAATATGTGATAATTACAACACTGGCTACTAGTAT CTTGGTTTTTGGATTTTGTAAGCAATTGAATTTTTTGTTGCATATTATGTAAATGATCTGCTTTTTACACAATCTGCTTT TCCTATTGCAGCCTTGGTCCGCCAGGAAATTCAGGATGAAACTGATAGAGTAACAGGGAAGACAAAACAAATATCTCCTA TTCCAATTCATCTTAGCATCTATTCTCCAAATGGTGCGCTTCATTTTTTTCACACTCGTCTTTTCTGAGAGCATTTAAGC TAGAGGGTTAAGTGTTTGTTGTGTAAATTAAAATCAATTATATAATATATATTTGAACTAGTTTTACATATAACTAGTTT ATCTAAATTTTGTTTTGAATACTTTAATTCCAAGTATTGCTTCATAGTAGAATATTAGAGTTATTGCACTATTAGTATTA GCACTTGACCAAATTATTAATATAAATAAACAGGAACATTAGGTTAATGTATCCTATCACGTCAAATTCTCAATCATATA TTCTATATTTAGTCTCTCCCTATTTCTCCTCCTTCACATAAACTATAGTTTCGGTATTTGAGAACACTAAAGACTGCTTA TGTATAAACCAAATTAGTATTGGATTTGTTTTGAACTATTTATGACCTGAAAACAAAGGAATAGTTTTATAATTTCAAGA AATTACCAAATACATAAGAATCAAAAACAGCAGCATTGCAGCTATTTATCAGTTTTGGTGGTTGCTGAACAAAATCCTTA ATTTGGTGGTTTTTTTTTTTTTTTTTTTGTTAATTTAGCTAAGTGTTTTCAAATAAGCATTCCTTTGCAGTATTTCTGTA TAGCACTAAATGAGACTAATAAATCTGTAATTCGAAGTTCTATATTTTTTATAATTCTTGTGTTTCCTAACTAATTTTCT AGCTTTTCCTGTTTGTTTTTTCAACAGTTGTCAACCTAACCTTGGTTGATTTACCGGGGCTAACTAAAGTTGCTGTAGGT ATGCTTTTCTTTTAATTGTTAATTATAAATCAATGATCAATTATTTGGATGAAACAACACTTATTTCATTTTTTTAGTTT CTATAAATGTGTCTATCTTTTTCAGAGGGACAGCCTGAGAGTATTGTTCAAGAAATTGAAACTATGGTTCGCACTTATGT TGAGAAGGTAAAATAAGTTTTTCTCTAATGCAATGAATTTATAAAGGGTAGAGCAACCTTCTCCCTTAAGCTTGATTAGG TTGAGGGTTGCTCAACCCTTTTATAAGGACTATTTTGTCCATATCTCTATTCAATGTGGGACTTTTCAACAGTACTGATA TCTGAAATATTATATGAGCATATTTCTAATCTATTACATAATTATATAAGGACTATTTTCGTATATCCTAATCTATTACA TAATTTTTTACGTATAGTTTGTCGATATACTGCTAGAACTATTAAATTCAATTTTTCCCCCTTATTGAAGCATTTTAAAA AACAAATGGGATTACTATACGAGCTCTACACCAAAAGTTTATATTTTCTTTAAGCAATTGCTTTATGTTCAACAGCCTAA TAGTATCATACTGGCAATATCCCCGGCCAACCAAGACATAGCAACTTCTGATGCTATTAAACTTGCTAGGGAAGTTGATC CCACAGGTAGTTTCTAAATGCTTCTTGGAATAGCCAATTATTGCCCTTTCTCATGTCATAGTTTTGTACTGAAATCCTTA TCTATCACCTAGGTGAAAGGACATTTGGGGTGTTGACAAAGCTAGATTTGATGGACAAAGGAACTAATGCTTTGGATGTA ATCTCTCTCTCCCCCTGCTCTTGTTTGAGTTGTTGCCTATGCCTTTGATGTTCAATTTTGAAGTGTGCCTGTAAGATTGT ATAACTGCTTTGGCTTCTTGCCCACTTTTATTCCCTGAAGGTCCTTGAAGGAAGGTCTTATCGGCTGCAACATCCTTGGG TTGGTATAGTAAATCGATCTCAGGCGGACATCAATAAAAATGTTGATATGATTATTGCTAGACGCAAGGAGCGCGAGTAT TTTGCAAATAGTCCTGATTATGGGCACTTGGCCAATAAAATGGGTTCAGAATACCTTGCAAAACTTCTCTCACAGGTTTC CATTTCAAAATATGTTATTTTCCGATCTTTTCTGAGATACCCTATCATTTTAATCATGTGAGCTTATTTCTGTAGCACTT GGAGTCAGTAATTAGGGCAAGGATACCTAGTATAACATCTTTAATAAACAAAAGCCTTGAGGAACTGGAATCAGAGATGG ATCATCTTGGGAGGCCTATTGCTCTTGATGCCGGGGTATGTGGTTTCTACTTGTAATGATTTCTTAGCTTCTTGCGGAAT AAAGTTATTTCTGAGGTCTCCTCATGATTATTTTCTGAATGTTAATTTCTGTTTCAGGCTCAACTATACACCATTCTAGA ACTTTGCCGAGCATTTGAACGGATATTCAAGGAGCATTTAGATGGAGGGTAATATCTTGTACTGTTTTCTACTCTTGTGC CGTGTTTGTCAAACTTGAAGATCCCACCTGGGATTGGATAAGGGATATAAATGTATTAACTGTGAAATCATAAAACGGAA CATAAGATCTTTCATCAAAATTGGAATAAAAAATTTCATACATATCACCATAATAGTGTTATAAATTGTATCAAATAACA GTGCCTCCATAATGGAGCCTTGCATTGGGAGGTCTATCACTCATTTGCATAGTGTTTTGGTGTTGCAGCTACTGTGGCAT GAATTGCGATGATGGTACAGCCCAAATCTTGAGTTGTGTTGTGATGCTTCTGCAGAGATTGAAACTCTGCTTTTCATTTG TTTTTTAATAAGATTCCTTTTTAACCCTCACTCACACTTACCAAACTTCTTTTTCTCCATCACTAAAACTAAGGTGTTAA GTTACCTTCACTCAAATGAAATATGTATTTATTTTGTGTTCTCCAACCCATCATCCAACTTCAAGAATTTGCGGCAGCTC CTTGATGCTCCCCAAACCGAGCTGCCTCTGCTGTGTCTTTTACAAGCAAGAAAAATATGTCTTCTGTCCTCACTGTCAAC AACCAATTGCCAGGAAAGCTTAAACATATGTATGTTTTGAACACTCAAAAGGCTGCTGTGTTCTACACCTATTTAACAGC CATTTGTCCTCTCCTAGTCAAAAATATTTTCAGCAATTAAAAAAAACTGTGATGCAGCTTACCCGCTGCATAATGTTAAA ATGCATAGCCAAAGCAATTTGAAATGACTTTTTGGATGTCAGTTTGTAATCACTGATGAACTCGTTGATAGGTCTCTTTG TTAACGGCATGTCTTTCTTTTGAATTGTTAGGCGGCCAGGAGGAGATAGGATATATCATGTCTTTGACAATCAGCTTCCT GCTGCTTTACGAAAGCTTCCATTTGACCGACATCTTTCTCTCCAGAATGTAAGGAAAGTGGTCTCAGAGGCTGATGGTTA TCAGCCTCACTTGATTGCCCCAGAGCAAGGTTACCGGCGCCTGATTGACTCGGCTCTCAGTTACTTTAGAGGCCCAGCTG AAGCTTCAGTAGATGCTGTATGCTGCCTGATTTTATTCTCTTGATTATTGATTTTCTTCTAAGTCACAATTTGAGCTGGT TATTCGTGATTGTTTTCTAGGTTAATTTTGTGTTAAAAGAACTTGTGAGGAAATCAATAGCTGAAACTAAGGTAAGATTC GTAGTTTATTTTGTAATAGCCTTGTTCATGAACTGAAAGGATTACTCGTGACACTAATATGTAACTGAGCAGGAACTCAA GCGCTTCCCAACTTTTCAAGCTGCACTAGCTACAGCCGCAAATGAGGCTTTAGAAAGGTTTCGTGAAGAGAGTAAGAAGA CAACTCTCCGGCTTGTAGATATGGAATCTTCGTATCTCACTGTGGATTTCTTCCGGAGACTTCCTCAGGAAGTGGAAAAA GCTGGAGGTCCTGCTACCCCAAATGTTGACCGATATGCAGAGGGGCATTTCAGAAGAATTGCATCAAATGTTTCTTCCTA TATAGGGTTGGTGGCAGACACGCTTAGGAACACAATACCGAAGGCTGTGGTTTTCTGTCAGGTCAGACAAGCTAAACAGT CTTTGCTAAACCATTTCTACACACAAATAGGGAAGAAAGAGGTATGTTGTCTCTAGCTCTCACTGTGTCTGTTTATCGCT TTATATTGTATGAACATGAGTATTTGTGTGAAGCCTAACTTGACTGGAGCTTAATCCAGATTGACTTTCAAACCTCTCAA GTATCTAATTTTATTTGTCTTTGGGATATGTTTTTTATTAGCATTCACCTTTTATGGTAACAAACTAATACAATTGTTTG GAGTAGTGCAATACTTATGAGGACAATCTGTACGTACAATTATCTTTTTCTACATTGTAGGGTCCAAGTTGGTAACTACA CTGTGCCATTGCTGTATATGATAAATGATAGTAATTTACTTCTAAGTTTATGTCCTAAGAGCATCTTCAATGGAGGTCCT TTTATTTTTTCCCGTTGGAGAAGACTGAGCTGGAGTTCTTGAAAATAAGGTCCCGTCGCTTCTGCAAGCAAATTTGCTTT TTGAGTTCTTTGATTAAAAAAATAGATTTTATCTCTCATTCATCAACTGCTTATATAAATATGAGGTATTGCGAGACCCA ACCAAAAGTAAAATAAGAACTCGTGGTTGGAGCAAAATTTGCATCAGTTGCTTATATCCTATGTGGCACTTTGGGCCCCC ACATGAACAATGCTAAGAACTCAAAATAAGAATTCATGGATGGAGATGCTCTAAGGGTATTTTGGGCATAGAATTAAATT AGTATTGCCAAATTATTTTTGTGGATACGGTGCTTCTGGTTTGATGAGAATTTGTCATCTTATGCTTGATAAACTCATCC TCTTCTAGTTTGATTTTTAGGACAAAATGTGTGTATAACTTTATATCCTATAATAATCCACACCATGTTGCACTTTATTA TGCATCATCTGTTTTACATGGTTTCAATATATATCCTTACGGAGATTTTACACGCTGTAGGGCAAACAGCTATCAGAAAT GTTAGATGAAGACCCTGCATTAATGGAGAGGAGGCAACAGTGTGCAAAAAGGCTTGAACTATATAAAGCAGCAAGGGATG AAATTGATTCTGTTTCTTGGGTACGATGA
CDS sequence (LotjaGi1g1v0597700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAGCTTGATTGGGTTGGTGAACCGAATTCAGAGGGCTTGCACTGTGCTTGGTGACCATGGAGCTGCTGCCGATGG CAACTCCTTCTCTTCTCTCTGGGAAGCTCTCCCTACTGTTGCTGTTGTTGGTGGCCAGAGTTCAGGGAAGTCTTCAGTTT TGGAGAGCATTGTTGGCCGTGACTTTCTGCCTAGAGGCTCAGGGATTGTGACAAGGCGTCCATTGGTGTTGCAGTTGCAT AAGCTGGAAACTGGGTCACAAGAGTATGCAGAGTTTCTTCATATGCCAAGGAGAAAGTTCACTGATTTTTCCTTGGTCCG CCAGGAAATTCAGGATGAAACTGATAGAGTAACAGGGAAGACAAAACAAATATCTCCTATTCCAATTCATCTTAGCATCT ATTCTCCAAATGTTGTCAACCTAACCTTGGTTGATTTACCGGGGCTAACTAAAGTTGCTGTAGAGGGACAGCCTGAGAGT ATTGTTCAAGAAATTGAAACTATGGTTCGCACTTATGTTGAGAAGGTCCTTGAAGGAAGGTCTTATCGGCTGCAACATCC TTGGGTTGGTATAGTAAATCGATCTCAGGCGGACATCAATAAAAATGTTGATATGATTATTGCTAGACGCAAGGAGCGCG AGTATTTTGCAAATAGTCCTGATTATGGGCACTTGGCCAATAAAATGGGTTCAGAATACCTTGCAAAACTTCTCTCACAG CACTTGGAGTCAGTAATTAGGGCAAGGATACCTAGTATAACATCTTTAATAAACAAAAGCCTTGAGGAACTGGAATCAGA GATGGATCATCTTGGGAGGCCTATTGCTCTTGATGCCGGGGCTCAACTATACACCATTCTAGAACTTTGCCGAGCATTTG AACGGATATTCAAGGAGCATTTAGATGGAGGGCGGCCAGGAGGAGATAGGATATATCATGTCTTTGACAATCAGCTTCCT GCTGCTTTACGAAAGCTTCCATTTGACCGACATCTTTCTCTCCAGAATGTAAGGAAAGTGGTCTCAGAGGCTGATGGTTA TCAGCCTCACTTGATTGCCCCAGAGCAAGGTTACCGGCGCCTGATTGACTCGGCTCTCAGTTACTTTAGAGGCCCAGCTG AAGCTTCAGTAGATGCTGTTAATTTTGTGTTAAAAGAACTTGTGAGGAAATCAATAGCTGAAACTAAGGAACTCAAGCGC TTCCCAACTTTTCAAGCTGCACTAGCTACAGCCGCAAATGAGGCTTTAGAAAGGTTTCGTGAAGAGAGTAAGAAGACAAC TCTCCGGCTTGTAGATATGGAATCTTCGTATCTCACTGTGGATTTCTTCCGGAGACTTCCTCAGGAAGTGGAAAAAGCTG GAGGTCCTGCTACCCCAAATGTTGACCGATATGCAGAGGGGCATTTCAGAAGAATTGCATCAAATGTTTCTTCCTATATA GGGTTGGTGGCAGACACGCTTAGGAACACAATACCGAAGGCTGTGGTTTTCTGTCAGGTCAGACAAGCTAAACAGTCTTT GCTAAACCATTTCTACACACAAATAGGGAAGAAAGAGGGCAAACAGCTATCAGAAATGTTAGATGAAGACCCTGCATTAA TGGAGAGGAGGCAACAGTGTGCAAAAAGGCTTGAACTATATAAAGCAGCAAGGGATGAAATTGATTCTGTTTCTTGGGTA CGATGA
Protein sequence (LotjaGi1g1v0597700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESLIGLVNRIQRACTVLGDHGAAADGNSFSSLWEALPTVAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVLQLH KLETGSQEYAEFLHMPRRKFTDFSLVRQEIQDETDRVTGKTKQISPIPIHLSIYSPNVVNLTLVDLPGLTKVAVEGQPES IVQEIETMVRTYVEKVLEGRSYRLQHPWVGIVNRSQADINKNVDMIIARRKEREYFANSPDYGHLANKMGSEYLAKLLSQ HLESVIRARIPSITSLINKSLEELESEMDHLGRPIALDAGAQLYTILELCRAFERIFKEHLDGGRPGGDRIYHVFDNQLP AALRKLPFDRHLSLQNVRKVVSEADGYQPHLIAPEQGYRRLIDSALSYFRGPAEASVDAVNFVLKELVRKSIAETKELKR FPTFQAALATAANEALERFREESKKTTLRLVDMESSYLTVDFFRRLPQEVEKAGGPATPNVDRYAEGHFRRIASNVSSYI GLVADTLRNTIPKAVVFCQVRQAKQSLLNHFYTQIGKKEGKQLSEMLDEDPALMERRQQCAKRLELYKAARDEIDSVSWV R
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 174 | 174 | 2.4E-68 | – | |
| PANTHER | 1 | 175 | 175 | 0.0 | – | |
| PANTHER | 1 | 175 | 175 | 0.0 | ||
| SMART | 1 | 202 | 202 | 1.0E-55 | ||
| SUPERFAMILY | 31 | 259 | 229 | 4.43E-50 | ||
| ProSiteProfiles | 34 | 174 | 141 | 30.189 | ||
| CDD | 37 | 251 | 215 | 3.87214E-89 | ||
| PRINTS | 37 | 55 | 19 | 7.5E-32 | ||
| Pfam | 40 | 174 | 135 | 9.3E-38 | ||
| PRINTS | 62 | 79 | 18 | 7.5E-32 | ||
| ProSitePatterns | 63 | 72 | 10 | - | ||
| PRINTS | 135 | 152 | 18 | 7.5E-32 | ||
| Gene3D | 175 | 270 | 96 | 7.9E-22 | – | |
| Pfam | 175 | 439 | 265 | 9.0E-59 | ||
| PANTHER | 176 | 561 | 386 | 0.0 | – | |
| PANTHER | 176 | 561 | 386 | 0.0 | ||
| Gene3D | 277 | 527 | 251 | 5.7E-54 | – | |
| SMART | 464 | 557 | 94 | 9.8E-33 | ||
| Pfam | 466 | 557 | 92 | 1.3E-24 | ||
| ProSiteProfiles | 469 | 561 | 93 | 22.927 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi1g1v0597700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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