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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0622300 |
| Transcript ID | LotjaGi1g1v0622300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Receptor-like protein kinase; TAIR: AT3G01840.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q9SGI7|LYK2_ARATH Protein LYK2; TrEMBL-Plants: tr|D3KU03|D3KU03_LOTJA LysM type receptor kinase; Found in the gene: LotjaGi1g1v0622300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:116958389..116960957) extracted from Lotus japonicus Gifu genome v1.2.
AAAAGAGTGACCTTCTTTACATGTATTTAAGAAATGCATATAAAGTCAGGTTTGAAGCGCCTCTAAGAGCAGGCGGTTAA AAGGGTGTAGGCTAGAGTCTCTTGCAAGTGAAGCAGAGGGAGGGGGGAGGTGTTGGTGCAGATCCTTTGCCAAAGGAATC AAGTCCAAAGGATTATTACAAACAGCTGGAAGCAAGTCAAAATACACAAAATAAAATTAGTGATTCCCAATAACCCTGTC TCTGAATTTGAAAAGTTCTGTTATCTTTCATTGTATAGATCCCAAAATACTCACTCTCCAAGAGTGAGAAGAAAAACCTT CTATTTTAATAGGCCACTCCCCATGTTAGAGCTAGCTGAGTGGTCATTGGCACAGTAGAACAAATGATCATCATTCCCTT CCACATGGGAGGAGCTTTGGTATTCTTCCTTTGCTTCCTTGTCCCTTCATTGGGTAAAAACCTGCTAACCTGTGAGACAA CATCACCATATGATGCCTCTGGCTACTACCATTGCAATGAAAAAGTGTCACACTCACTGAGCCATTGTGGAACATTTGCA CTCTTCCTCACTAACTCTCACTACCCTTCTCTCTCCAACCTCACCTTTTACTTGGGACTCAATAGGTTTGTCATAGCAGA AGCAAATGGATTCTCTGCTGAAACTGAGTTCCTCCCTCAGAATCACCCTCTTCTCATACCAATTGATTGTAGATGCAAAG GTGAGTTTTTTCAGGCTGAGTTAACCAAAACAACCATCAAAGGTGAGAGCTTTTATTCCATTGCTGAATCACTGGAAGGC TTGACAACCTGCAAGGCTATTAGGGAAAATAACCCTGATGTTTCACCTTGGAATCTTGATGATAATCTCAGATTGATTAT CCCATTGAGGTGTGCTTGCCCATTTTCATCTGAACCAAGAATTTTGCTTTCTTATATTGTAAGGGAAGGTGATACAATTT CCAATTTGGCCTCAAAGTTCAATATTACAAAAGAAGCTATAGTTTCTGCAAATAACATATCACTAGAAGGGCTTGGACCA AAAAAACTTGCACCCTTTACCTCTATTCTGATTCCACTGAATGGTAAACCAATTTTTGGTCCACTGGCTAAACCCATGGA ACCCAATTCAAGTTTTCCAACAACCAGAATCCCAACACACAAGAAGTCAGCAATGTGGAAAACTGAATTGTACATTGCAC TAGCTGGGGTTGCAATTGGAGTCTTCATTGCTTTTGCAGCAGCTTTCTTTGTGATCAGGTTGAAGCAAAAGAAGGTGAAA GAGAATTCAAGCAAAGAAAGAGACATGGAGCTGCAATATCTGAATCAAAGTGTGAGAACCACAACCACAAGTGACAAGAA GATTTCATTTGAGGGATCACAGGACACTCTTGATGGGAAAATGGTTGATACCAATAAGATGTTGCTGGAGACATACACTG TTGAAGATATGAGAAAAGCAACTGAGGATTTCAGTTCAAGCAATCAAATTGAAGGATCAGTGTTTCATGGCCGTTTAAAA GGGAAGGACATAGCAATCAAAAGAACAAAGACAGAGATGGTGTCAAAGATAGATCTTAGCCTCTTCCACTATTCTTCACT TCACCACCATCCTAACATCCTTGGGGTTCTGGGGACATGTTTGTTAGAGGGGCCAGAGTCATATCTGGTTCTTGAGTATG CTAAAAATGGTTCATTGAAAGATTGGCTTCATGGTGGCTTAGCCATCAAGAACCAGTTCATTGCTTCCTGCTATTGTTTC CTGAATTGGAGCCAAAGGCTCAGGATTTGCCTAGACATAGCCAATGCCTTGAAATACATGCACCATGTTATGAACCCAAG CTATGTGCATAGAAATGTGAAGAGCAGGAACATTTTTATAGATGAAGAATTTGGTGCCAAGATAGGCAATTTTGGGTGTG TTGAGAATGATTATGACACTGAAGACCCTCATTTCTATTCTACTAACCCTGCCTCTTGGAGTTTGGGTTATTTGGCACCA GAATATGTGCACCAAGGTGTGATTTCTCCAAGCATTGATATTTTTGCTTATGGGGTGGTGTTGTTGGAGGTTTTAACTGG TCAAACACCTATAAGCAGGACAAATGATAAAGGGGAAGGAAGTGTTTGGCTTACTGAAAAAGTAAGGTCCACTTTGGTGT CAGAAAATGTGAATGAACTGAGGGAGTGGATAGACAGTGCATTAGGGGAGAACTACTCAATTGATGCAGCTATGACAGTG GCTAAAATTGCAAGAGCTTGTGTGGAGGAAGATTCATCTTTGAGGCCAAGTGCAAGAGAAATTGTTGAGAAGCTATCAAT ATTGGTGGAGGAATTACCAGAAAGGGAACAAAAAGTGTCAATAAGTGAAAGCTCTTGCAAACCTCTTGTGGACAATCTGT GAATAATCCACTCAAAAAGATCATATAGACACAATGATTTAAGTCTCTGGTCATTGAATTCAGCCCTTGTTTAATATTTG AGTGCCTGTAGGCTATGCATACCTAAAAAAAATCTCTTGCCCTTTGCTTATGTAGTTCAATGTTTTCCTTAATATTTGAT AAGATAGAG
CDS sequence (LotjaGi1g1v0622300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATCATCATTCCCTTCCACATGGGAGGAGCTTTGGTATTCTTCCTTTGCTTCCTTGTCCCTTCATTGGGTAAAAACCT GCTAACCTGTGAGACAACATCACCATATGATGCCTCTGGCTACTACCATTGCAATGAAAAAGTGTCACACTCACTGAGCC ATTGTGGAACATTTGCACTCTTCCTCACTAACTCTCACTACCCTTCTCTCTCCAACCTCACCTTTTACTTGGGACTCAAT AGGTTTGTCATAGCAGAAGCAAATGGATTCTCTGCTGAAACTGAGTTCCTCCCTCAGAATCACCCTCTTCTCATACCAAT TGATTGTAGATGCAAAGGTGAGTTTTTTCAGGCTGAGTTAACCAAAACAACCATCAAAGGTGAGAGCTTTTATTCCATTG CTGAATCACTGGAAGGCTTGACAACCTGCAAGGCTATTAGGGAAAATAACCCTGATGTTTCACCTTGGAATCTTGATGAT AATCTCAGATTGATTATCCCATTGAGGTGTGCTTGCCCATTTTCATCTGAACCAAGAATTTTGCTTTCTTATATTGTAAG GGAAGGTGATACAATTTCCAATTTGGCCTCAAAGTTCAATATTACAAAAGAAGCTATAGTTTCTGCAAATAACATATCAC TAGAAGGGCTTGGACCAAAAAAACTTGCACCCTTTACCTCTATTCTGATTCCACTGAATGGTAAACCAATTTTTGGTCCA CTGGCTAAACCCATGGAACCCAATTCAAGTTTTCCAACAACCAGAATCCCAACACACAAGAAGTCAGCAATGTGGAAAAC TGAATTGTACATTGCACTAGCTGGGGTTGCAATTGGAGTCTTCATTGCTTTTGCAGCAGCTTTCTTTGTGATCAGGTTGA AGCAAAAGAAGGTGAAAGAGAATTCAAGCAAAGAAAGAGACATGGAGCTGCAATATCTGAATCAAAGTGTGAGAACCACA ACCACAAGTGACAAGAAGATTTCATTTGAGGGATCACAGGACACTCTTGATGGGAAAATGGTTGATACCAATAAGATGTT GCTGGAGACATACACTGTTGAAGATATGAGAAAAGCAACTGAGGATTTCAGTTCAAGCAATCAAATTGAAGGATCAGTGT TTCATGGCCGTTTAAAAGGGAAGGACATAGCAATCAAAAGAACAAAGACAGAGATGGTGTCAAAGATAGATCTTAGCCTC TTCCACTATTCTTCACTTCACCACCATCCTAACATCCTTGGGGTTCTGGGGACATGTTTGTTAGAGGGGCCAGAGTCATA TCTGGTTCTTGAGTATGCTAAAAATGGTTCATTGAAAGATTGGCTTCATGGTGGCTTAGCCATCAAGAACCAGTTCATTG CTTCCTGCTATTGTTTCCTGAATTGGAGCCAAAGGCTCAGGATTTGCCTAGACATAGCCAATGCCTTGAAATACATGCAC CATGTTATGAACCCAAGCTATGTGCATAGAAATGTGAAGAGCAGGAACATTTTTATAGATGAAGAATTTGGTGCCAAGAT AGGCAATTTTGGGTGTGTTGAGAATGATTATGACACTGAAGACCCTCATTTCTATTCTACTAACCCTGCCTCTTGGAGTT TGGGTTATTTGGCACCAGAATATGTGCACCAAGGTGTGATTTCTCCAAGCATTGATATTTTTGCTTATGGGGTGGTGTTG TTGGAGGTTTTAACTGGTCAAACACCTATAAGCAGGACAAATGATAAAGGGGAAGGAAGTGTTTGGCTTACTGAAAAAGT AAGGTCCACTTTGGTGTCAGAAAATGTGAATGAACTGAGGGAGTGGATAGACAGTGCATTAGGGGAGAACTACTCAATTG ATGCAGCTATGACAGTGGCTAAAATTGCAAGAGCTTGTGTGGAGGAAGATTCATCTTTGAGGCCAAGTGCAAGAGAAATT GTTGAGAAGCTATCAATATTGGTGGAGGAATTACCAGAAAGGGAACAAAAAGTGTCAATAAGTGAAAGCTCTTGCAAACC TCTTGTGGACAATCTGTGA
Protein sequence (LotjaGi1g1v0622300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIIIPFHMGGALVFFLCFLVPSLGKNLLTCETTSPYDASGYYHCNEKVSHSLSHCGTFALFLTNSHYPSLSNLTFYLGLN RFVIAEANGFSAETEFLPQNHPLLIPIDCRCKGEFFQAELTKTTIKGESFYSIAESLEGLTTCKAIRENNPDVSPWNLDD NLRLIIPLRCACPFSSEPRILLSYIVREGDTISNLASKFNITKEAIVSANNISLEGLGPKKLAPFTSILIPLNGKPIFGP LAKPMEPNSSFPTTRIPTHKKSAMWKTELYIALAGVAIGVFIAFAAAFFVIRLKQKKVKENSSKERDMELQYLNQSVRTT TTSDKKISFEGSQDTLDGKMVDTNKMLLETYTVEDMRKATEDFSSSNQIEGSVFHGRLKGKDIAIKRTKTEMVSKIDLSL FHYSSLHHHPNILGVLGTCLLEGPESYLVLEYAKNGSLKDWLHGGLAIKNQFIASCYCFLNWSQRLRICLDIANALKYMH HVMNPSYVHRNVKSRNIFIDEEFGAKIGNFGCVENDYDTEDPHFYSTNPASWSLGYLAPEYVHQGVISPSIDIFAYGVVL LEVLTGQTPISRTNDKGEGSVWLTEKVRSTLVSENVNELREWIDSALGENYSIDAAMTVAKIARACVEEDSSLRPSAREI VEKLSILVEELPEREQKVSISESSCKPLVDNL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 24 | 24 | - | – | |
| Phobius | 1 | 8 | 8 | - | – | |
| Phobius | 1 | 24 | 24 | - | – | |
| TMHMM | 4 | 23 | 20 | - | – | |
| PANTHER | 9 | 670 | 662 | 0.0 | – | |
| Phobius | 9 | 20 | 12 | - | – | |
| PANTHER | 9 | 670 | 662 | 0.0 | – | |
| Phobius | 21 | 24 | 4 | - | – | |
| Phobius | 25 | 268 | 244 | - | – | |
| ProSiteProfiles | 120 | 166 | 47 | 8.151 | ||
| Gene3D | 181 | 231 | 51 | 2.9E-8 | ||
| ProSiteProfiles | 182 | 230 | 49 | 11.669 | ||
| SUPERFAMILY | 183 | 231 | 49 | 2.09E-5 | – | |
| SMART | 183 | 231 | 49 | 1.7E-7 | ||
| CDD | 183 | 230 | 48 | 9.43821E-7 | ||
| Pfam | 184 | 231 | 48 | 1.0E-7 | ||
| TMHMM | 269 | 291 | 23 | - | – | |
| Phobius | 269 | 291 | 23 | - | – | |
| Phobius | 292 | 672 | 381 | - | – | |
| Gene3D | 338 | 432 | 95 | 4.1E-9 | – | |
| SUPERFAMILY | 344 | 644 | 301 | 3.93E-55 | ||
| ProSiteProfiles | 359 | 647 | 289 | 28.202 | ||
| Pfam | 371 | 642 | 272 | 2.9E-31 | ||
| Gene3D | 433 | 666 | 234 | 1.4E-47 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0622300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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