Domain Predictions — View

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cd02186

Source: CDD

Description

alpha_tubulin

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 16

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v2095980.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Tubulin alpha-7 chain [Medicago truncatula] gi\|357466771\|ref\|XP_003603670.1\|	Domains Coil G3DSA:1.10.287.600 G3DSA:3.30.1330.20 G3DSA:3.40.50.1440 IPR000217 IPR002452 IPR003008 IPR008280 IPR017975 IPR018316 IPR023123 PF00091 PF03953 PR01161 PR01162 PS00227 PTHR11588 PTHR11588:SF101 SM00864 SM00865 SSF52490 SSF55307 cd02186 mobidb-lite	24
Lj1g3v3975290.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: tubulin alpha-1 chain [Vitis vinifera] gi\|225435758\|ref\|XP_002285721.1\|	Domains Coil G3DSA:1.10.287.600 G3DSA:3.30.1330.20 G3DSA:3.40.50.1440 IPR000217 IPR002452 IPR003008 IPR008280 IPR017975 IPR018316 IPR023123 PF00091 PF03953 PR01161 PR01162 PS00227 PTHR11588 PTHR11588:SF137 SM00864 SM00865 SSF52490 SSF55307 cd02186	23
Lj4g3v2604350.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	RecName: Full=Tubulin alpha-3 chain; AltName: Full=Alpha-3-tubulingi\|2511535\|gb\|AAC05719.1\| alpha-tubulin 3 [Eleusine indica] gi\|6094431\|sp\|O22349.1\|TBA3_ELEIN	Domains Coil G3DSA:1.10.287.600 G3DSA:3.30.1330.20 G3DSA:3.40.50.1440 IPR000217 IPR002452 IPR003008 IPR008280 IPR013838 IPR017975 IPR018316 IPR023123 PF00091 PF03953 PR01161 PR01162 PS00227 PS00228 PTHR11588 PTHR11588:SF48 SM00864 SM00865 SSF52490 SSF55307 cd02186	25
Lj5g3v2065190.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: tubulin alpha chain-like [Cicer arietinum] gi\|502120143\|ref\|XP_004496862.1\|	Domains Coil G3DSA:1.10.287.600 G3DSA:3.30.1330.20 G3DSA:3.40.50.1440 IPR000217 IPR002452 IPR003008 IPR008280 IPR017975 IPR018316 IPR023123 PF00091 PF03953 PR01161 PR01162 PS00227 PTHR11588 PTHR11588:SF101 SM00864 SM00865 SSF52490 SSF55307 cd02186	23
LotjaGi1g1v0412500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Tubulin alpha chain; TAIR: AT1G04820.1 tubulin alpha-4 chain; Swiss-Prot: sp\|P46259\|TBA1_PEA Tubulin alpha-1 chain; TrEMBL-Plants: tr\|A0A0L9UGJ9\|A0A0L9UGJ9_PHAAN Tubulin alpha chain; Found in the gene: LotjaGi1g1v0412500	Domains Coil G3DSA:1.10.287.600 G3DSA:3.30.1330.20 G3DSA:3.40.50.1440 IPR000217 IPR002452 IPR003008 IPR008280 IPR017975 IPR018316 IPR023123 IPR036525 IPR037103 PF00091 PF03953 PR01161 PR01162 PS00227 PTHR11588 PTHR11588:SF323 SM00864 SM00865 SSF52490 SSF55307 cd02186 mobidb-lite	26
LotjaGi1g1v0412500.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Tubulin alpha chain; TAIR: AT4G14960.1 Tubulin/FtsZ family protein; Swiss-Prot: sp\|Q6VAG0\|TBA2_GOSHI Tubulin alpha-2 chain; TrEMBL-Plants: tr\|W9QUC8\|W9QUC8_9ROSA Tubulin alpha chain; Found in the gene: LotjaGi1g1v0412500	Domains G3DSA:3.30.1330.20 G3DSA:3.40.50.1440 IPR000217 IPR002452 IPR003008 IPR008280 IPR017975 IPR018316 IPR036525 IPR037103 PF00091 PF03953 PR01161 PR01162 PS00227 PTHR11588 PTHR11588:SF323 SM00864 SM00865 SSF52490 SSF55307 cd02186	22
LotjaGi1g1v0643600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Tubulin alpha chain; TAIR: AT5G19770.1 tubulin alpha-3; Swiss-Prot: sp\|O22349\|TBA3_ELEIN Tubulin alpha-3 chain; TrEMBL-Plants: tr\|I1ML11\|I1ML11_SOYBN Tubulin alpha chain; Found in the gene: LotjaGi1g1v0643600	Domains Coil G3DSA:1.10.287.600 G3DSA:3.30.1330.20 G3DSA:3.40.50.1440 IPR000217 IPR002452 IPR003008 IPR008280 IPR017975 IPR018316 IPR023123 IPR036525 IPR037103 PF00091 PF03953 PR01161 PR01162 PS00227 PTHR11588 PTHR11588:SF333 SM00864 SM00865 SSF52490 SSF55307 cd02186	25
LotjaGi1g1v0643600.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Tubulin alpha chain; TAIR: AT5G19770.1 tubulin alpha-3; Swiss-Prot: sp\|O22349\|TBA3_ELEIN Tubulin alpha-3 chain; TrEMBL-Plants: tr\|I1ML11\|I1ML11_SOYBN Tubulin alpha chain; Found in the gene: LotjaGi1g1v0643600	Domains Coil G3DSA:1.10.287.600 G3DSA:3.30.1330.20 G3DSA:3.40.50.1440 IPR000217 IPR002452 IPR003008 IPR008280 IPR017975 IPR018316 IPR023123 IPR036525 IPR037103 PF00091 PF03953 PR01161 PR01162 PS00227 PTHR11588 PTHR11588:SF333 SM00864 SM00865 SSF52490 SSF55307 cd02186	25
LotjaGi2g1v0107000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Tubulin alpha chain; TAIR: AT5G19770.1 tubulin alpha-3; Swiss-Prot: sp\|P28752\|TBA1_ORYSJ Tubulin alpha-1 chain; TrEMBL-Plants: tr\|A0A0L9VLH4\|A0A0L9VLH4_PHAAN Tubulin alpha chain; Found in the gene: LotjaGi2g1v0107000	Domains G3DSA:1.10.287.600 G3DSA:3.30.1330.20 G3DSA:3.40.50.1440 IPR000217 IPR002452 IPR003008 IPR008280 IPR013838 IPR017975 IPR018316 IPR023123 IPR036525 IPR037103 PF00091 PF03953 PR01161 PR01162 PS00227 PS00228 PTHR11588 PTHR11588:SF352 SM00864 SM00865 SSF52490 SSF55307 cd02186	26
LotjaGi2g1v0107000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Tubulin alpha chain; TAIR: AT5G19770.1 tubulin alpha-3; Swiss-Prot: sp\|Q56WH1\|TBA3_ARATH Tubulin alpha-3 chain; TrEMBL-Plants: tr\|A0A0L9VLH4\|A0A0L9VLH4_PHAAN Tubulin alpha chain; Found in the gene: LotjaGi2g1v0107000	Domains G3DSA:3.30.1330.20 G3DSA:3.40.50.1440 IPR000217 IPR002452 IPR003008 IPR008280 IPR013838 IPR017975 IPR018316 IPR036525 IPR037103 PF00091 PF03953 PR01161 PR01162 PS00227 PS00228 PTHR11588 PTHR11588:SF352 SM00864 SM00865 SSF52490 SSF55307 cd02186	24
LotjaGi2g1v0107000.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Tubulin alpha chain; TAIR: AT5G19770.1 tubulin alpha-3; Swiss-Prot: sp\|Q56WH1\|TBA3_ARATH Tubulin alpha-3 chain; TrEMBL-Plants: tr\|A0A0L9VLH4\|A0A0L9VLH4_PHAAN Tubulin alpha chain; Found in the gene: LotjaGi2g1v0107000	Domains G3DSA:3.30.1330.20 G3DSA:3.40.50.1440 IPR000217 IPR002452 IPR003008 IPR008280 IPR013838 IPR017975 IPR018316 IPR036525 IPR037103 PF00091 PF03953 PR01161 PR01162 PS00227 PS00228 PTHR11588 PTHR11588:SF352 SM00864 SM00865 SSF52490 SSF55307 cd02186	24
LotjaGi4g1v0376700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Tubulin alpha chain; TAIR: AT5G19770.1 tubulin alpha-3; Swiss-Prot: sp\|Q56WH1\|TBA3_ARATH Tubulin alpha-3 chain; TrEMBL-Plants: tr\|A0A151TKV5\|A0A151TKV5_CAJCA Tubulin alpha chain; Found in the gene: LotjaGi4g1v0376700	Domains Coil G3DSA:1.10.287.600 G3DSA:3.30.1330.20 G3DSA:3.40.50.1440 IPR000217 IPR002452 IPR003008 IPR008280 IPR013838 IPR017975 IPR018316 IPR023123 IPR036525 IPR037103 PF00091 PF03953 PR01161 PR01162 PS00227 PS00228 PTHR11588 PTHR11588:SF333 SM00864 SM00865 SSF52490 SSF55307 cd02186	27
LotjaGi4g1v0376700.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Tubulin alpha chain; TAIR: AT5G19770.1 tubulin alpha-3; Swiss-Prot: sp\|Q56WH1\|TBA3_ARATH Tubulin alpha-3 chain; TrEMBL-Plants: tr\|A0A151TKV5\|A0A151TKV5_CAJCA Tubulin alpha chain; Found in the gene: LotjaGi4g1v0376700	Domains G3DSA:3.30.1330.20 G3DSA:3.40.50.1440 IPR000217 IPR002452 IPR003008 IPR008280 IPR013838 IPR017975 IPR018316 IPR036525 IPR037103 PF00091 PF03953 PR01161 PR01162 PS00227 PS00228 PTHR11588 PTHR11588:SF341 SM00864 SM00865 SSF52490 SSF55307 cd02186	24
LotjaGi4g1v0376700.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Tubulin alpha chain; TAIR: AT5G19770.1 tubulin alpha-3; Swiss-Prot: sp\|Q56WH1\|TBA3_ARATH Tubulin alpha-3 chain; TrEMBL-Plants: tr\|A0A151TKV5\|A0A151TKV5_CAJCA Tubulin alpha chain; Found in the gene: LotjaGi4g1v0376700	Domains Coil G3DSA:1.10.287.600 G3DSA:3.30.1330.20 G3DSA:3.40.50.1440 IPR000217 IPR002452 IPR003008 IPR008280 IPR013838 IPR017975 IPR018316 IPR023123 IPR036525 IPR037103 PF00091 PF03953 PR01161 PR01162 PS00227 PS00228 PTHR11588 PTHR11588:SF333 SM00864 SM00865 SSF52490 SSF55307 cd02186	27
LotjaGi4g1v0376700.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Tubulin alpha chain; TAIR: AT5G19770.1 tubulin alpha-3; Swiss-Prot: sp\|Q56WH1\|TBA3_ARATH Tubulin alpha-3 chain; TrEMBL-Plants: tr\|A0A151TKV5\|A0A151TKV5_CAJCA Tubulin alpha chain; Found in the gene: LotjaGi4g1v0376700	Domains Coil G3DSA:1.10.287.600 G3DSA:3.30.1330.20 G3DSA:3.40.50.1440 IPR000217 IPR002452 IPR003008 IPR008280 IPR013838 IPR017975 IPR018316 IPR023123 IPR036525 IPR037103 PF00091 PF03953 PR01161 PR01162 PS00227 PS00228 PTHR11588 PTHR11588:SF333 SM00864 SM00865 SSF52490 SSF55307 cd02186	27
LotjaGi5g1v0319800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Tubulin alpha chain; TAIR: AT1G04820.1 tubulin alpha-4 chain; Swiss-Prot: sp\|Q6VAF9\|TBA4_GOSHI Tubulin alpha-4 chain; TrEMBL-Plants: tr\|A0A1J7FT38\|A0A1J7FT38_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0319800	Domains Coil G3DSA:1.10.287.600 G3DSA:3.30.1330.20 G3DSA:3.40.50.1440 IPR000217 IPR002452 IPR003008 IPR008280 IPR017975 IPR018316 IPR023123 IPR036525 IPR037103 PF00091 PF03953 PR01161 PR01162 PS00227 PTHR11588 PTHR11588:SF323 SM00864 SM00865 SSF52490 SSF55307 cd02186	25

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd02186	CDD	1	6.25