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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0655200 |
| Transcript ID | LotjaGi1g1v0655200.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Histone-lysine N-methyltransferase, H3 lysine-9 specific; TAIR: AT1G73100.1 histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3-like protein; Swiss-Prot: sp|Q93YF5|SUVH1_TOBAC Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1; TrEMBL-Plants: tr|K7KEJ7|K7KEJ7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0655200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:121470703..121472793) extracted from Lotus japonicus Gifu genome v1.2.
ATGGATCACAATTTAGGTCAAGACCCTGCACCTGCAGCTGGGTCCTTTGATAAGTCTAGGGTTTTAAATGTTAAGCCATT GAGAACTCTTGTCCCTGTGTTTCCTTCACCATCCAATCCCTCTTCATCTGCAACCCCACAAGGTGGTGCTCCTTTTGTTT GTGTTTCTCCTTCTGGTCCTTTCCCCTCTGGGGTTGCGCCGTTTTACCCTTTCTTCGTCTCCCCGGAGTCCCAGAGACTC TCTGAACAAAATGCACAAACCCCAACTGCTCAACGTGCTGCCCCAATATCTGCTGCAGTTCCAATTAATTCATTCAGGAC ACCAACTGGGGCTACAAATGGAGATGTGGGTTCCTCGCGGAGGAAAAGTCGTGGCCAGTTACCAGAGGATGATAACTTTG TTGATCTGAGTGAAGTTGATGGAGAAGGTGGAACTGGAGATGGGAAGAGGCGCAAGCCACAGAAGAGGATAAGGGAAAAG CGCTGCTCTTCTGATGTTGATCCAGATGCAGTGGCTAATGAAATTCTGAAAACAATTAACCCTGGGGTTTTTGAAATACT GAATCAACCTGATGGTAGCAGGGACGCCGTTGCTTATACGCTTATGATATATGAAGTGATGAGGAGGAAGCTTGGACAAA TTGACGAGAAAGCAAAGGGATCCCATTCTGGAGCAAAGCGCCCTGATCTAAAGGCTGGTACACTTATGAATACCAAAGGG ATTCGGGCTAACAGCAGGAAGAGAATTGGAGTTGTTCCTGGTGTCGAGGTTGGGGATATTTTCTTCTTCCGATTTGAGTT GTGCTTGGTGGGGTTGCATGCTCCTTCTATGGCTGGAATTGATTACTTGGGCACCAAAGTCAGTCAAGAAGAAGAGCCAT TAGCTGTCAGTATTGTATCTTCTGGAGGGTATGAAGATAATGTGGAGGATGGCGATGTGCTGATTTACAGTGGACAAGGT GGGACTAGCCGTGAAAAGGGAGCAAGTGATCAAAAGCTTGAAAGGGGTAATCTTGCTTTGGAGAGGAGCCTGCACAGAGG TAATGATGTGAGAGTAATTAGGGGTATGAGGGATGAAGCACATCCAACTGGGAAGGTATATGTCTATGATGGTCTTTACA AGATTCAGAATTCATGGGTGGAGAAAGCGAAATCTGGTTTCAATGTGTTCAAATACAAATTAGTCAGATTGCCTGGGCAG CCCCAAGCATACATGATATGGAAATCCATTCTACAATGGACTGATAAGTCTGCTTCAAGAGTGGGGGTTATATTGCCCGA CCTTACGTCTGGGGCTGAAAAGTTACCTGTTTGTCTTGTGAATGATGTTGACAACGAGAAGGGCCCTGCATATTTCACTT ACAGCCCTACTCTCAAGAATCTGAATCGATTAGCTCCTGTGGAGTCTTCTGAGGGATGCACTTGTAATGGTGGATGTCAA CCTGGCAGTCATAAATGTGGTTGCACTCAAAAGAATGGAGGTTATCTCCCATATTCTGCAGCTGGGTTGCTTGCGGATTT AAAATCCGTGGTATATGAGTGCGGTCCTTCCTGTCATTGCCCTCCTAGTTGCCGAAATCGTGTTTCCCAAGGTGGCTTGA AACTTCGTCTGGAGGTGTTTAGAACAAAAGGTAAAGGTTGGGGTCTAAGGTCATGGGACCCTATTCGTGCTGGAACGTTC ATATGTGAGTATGCAGGGGAAGTCATAGATAATGCTAGAGTGGAGGAGCTCAGCGGTGAGAATGAAGATGACTACATCTT TGATTCTACCCGCATTTATCAGCAACTGGAAGTTTTTTCCAGTGACGTTGAAGCTCCGAAGATCCCATCTCCCCTTTACA TAACAGCAAGGAATGAAGGGAACGTTGCTCGGTTTATGAATCACAGCTGCACTCCAAATGTGTTATGGCGTCCAGTCGTA CGTGAAAACAAGAATGAAGCAGACCTCCATGTTGCTTTCTATGCAATCAGACATATCCCTCCGATGATGGAATTAACTTA TGATTATGGGATAGTTCTTCCTCTCAAAGTAGGTCAGAAGAAAAAGAAATGCTTGTGTGGATCTGTCAAATGCAGGGGTT ACTTTTGCTAA
CDS sequence (LotjaGi1g1v0655200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATCACAATTTAGGTCAAGACCCTGCACCTGCAGCTGGGTCCTTTGATAAGTCTAGGGTTTTAAATGTTAAGCCATT GAGAACTCTTGTCCCTGTGTTTCCTTCACCATCCAATCCCTCTTCATCTGCAACCCCACAAGGTGGTGCTCCTTTTGTTT GTGTTTCTCCTTCTGGTCCTTTCCCCTCTGGGGTTGCGCCGTTTTACCCTTTCTTCGTCTCCCCGGAGTCCCAGAGACTC TCTGAACAAAATGCACAAACCCCAACTGCTCAACGTGCTGCCCCAATATCTGCTGCAGTTCCAATTAATTCATTCAGGAC ACCAACTGGGGCTACAAATGGAGATGTGGGTTCCTCGCGGAGGAAAAGTCGTGGCCAGTTACCAGAGGATGATAACTTTG TTGATCTGAGTGAAGTTGATGGAGAAGGTGGAACTGGAGATGGGAAGAGGCGCAAGCCACAGAAGAGGATAAGGGAAAAG CGCTGCTCTTCTGATGTTGATCCAGATGCAGTGGCTAATGAAATTCTGAAAACAATTAACCCTGGGGTTTTTGAAATACT GAATCAACCTGATGGTAGCAGGGACGCCGTTGCTTATACGCTTATGATATATGAAGTGATGAGGAGGAAGCTTGGACAAA TTGACGAGAAAGCAAAGGGATCCCATTCTGGAGCAAAGCGCCCTGATCTAAAGGCTGGTACACTTATGAATACCAAAGGG ATTCGGGCTAACAGCAGGAAGAGAATTGGAGTTGTTCCTGGTGTCGAGGTTGGGGATATTTTCTTCTTCCGATTTGAGTT GTGCTTGGTGGGGTTGCATGCTCCTTCTATGGCTGGAATTGATTACTTGGGCACCAAAGTCAGTCAAGAAGAAGAGCCAT TAGCTGTCAGTATTGTATCTTCTGGAGGGTATGAAGATAATGTGGAGGATGGCGATGTGCTGATTTACAGTGGACAAGGT GGGACTAGCCGTGAAAAGGGAGCAAGTGATCAAAAGCTTGAAAGGGGTAATCTTGCTTTGGAGAGGAGCCTGCACAGAGG TAATGATGTGAGAGTAATTAGGGGTATGAGGGATGAAGCACATCCAACTGGGAAGGTATATGTCTATGATGGTCTTTACA AGATTCAGAATTCATGGGTGGAGAAAGCGAAATCTGGTTTCAATGTGTTCAAATACAAATTAGTCAGATTGCCTGGGCAG CCCCAAGCATACATGATATGGAAATCCATTCTACAATGGACTGATAAGTCTGCTTCAAGAGTGGGGGTTATATTGCCCGA CCTTACGTCTGGGGCTGAAAAGTTACCTGTTTGTCTTGTGAATGATGTTGACAACGAGAAGGGCCCTGCATATTTCACTT ACAGCCCTACTCTCAAGAATCTGAATCGATTAGCTCCTGTGGAGTCTTCTGAGGGATGCACTTGTAATGGTGGATGTCAA CCTGATAATGCTAGAGTGGAGGAGCTCAGCGGTGAGAATGAAGATGACTACATCTTTGATTCTACCCGCATTTATCAGCA ACTGGAAGTTTTTTCCAGTGACGTTGAAGCTCCGAAGATCCCATCTCCCCTTTACATAACAGCAAGGAATGAAGGGAACG TTGCTCGGTTTATGAATCACAGCTGCACTCCAAATGTGTTATGGCGTCCAGTCGTACGTGAAAACAAGAATGAAGCAGAC CTCCATGTTGCTTTCTATGCAATCAGACATATCCCTCCGATGATGGAATTAACTTATGATTATGGGATAGTTCTTCCTCT CAAAGTAGGTCAGAAGAAAAAGAAATGCTTGTGTGGATCTGTCAAATGCAGGGGTTACTTTTGCTAA
Protein sequence (LotjaGi1g1v0655200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDHNLGQDPAPAAGSFDKSRVLNVKPLRTLVPVFPSPSNPSSSATPQGGAPFVCVSPSGPFPSGVAPFYPFFVSPESQRL SEQNAQTPTAQRAAPISAAVPINSFRTPTGATNGDVGSSRRKSRGQLPEDDNFVDLSEVDGEGGTGDGKRRKPQKRIREK RCSSDVDPDAVANEILKTINPGVFEILNQPDGSRDAVAYTLMIYEVMRRKLGQIDEKAKGSHSGAKRPDLKAGTLMNTKG IRANSRKRIGVVPGVEVGDIFFFRFELCLVGLHAPSMAGIDYLGTKVSQEEEPLAVSIVSSGGYEDNVEDGDVLIYSGQG GTSREKGASDQKLERGNLALERSLHRGNDVRVIRGMRDEAHPTGKVYVYDGLYKIQNSWVEKAKSGFNVFKYKLVRLPGQ PQAYMIWKSILQWTDKSASRVGVILPDLTSGAEKLPVCLVNDVDNEKGPAYFTYSPTLKNLNRLAPVESSEGCTCNGGCQ PDNARVEELSGENEDDYIFDSTRIYQQLEVFSSDVEAPKIPSPLYITARNEGNVARFMNHSCTPNVLWRPVVRENKNEAD LHVAFYAIRHIPPMMELTYDYGIVLPLKVGQKKKKCLCGSVKCRGYFC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 24 | 483 | 460 | 1.8E-206 | – | |
| PANTHER | 24 | 483 | 460 | 1.8E-206 | – | |
| MobiDBLite | 103 | 120 | 18 | - | – | |
| MobiDBLite | 103 | 165 | 63 | - | – | |
| MobiDBLite | 142 | 165 | 24 | - | – | |
| Gene3D | 187 | 402 | 216 | 1.5E-71 | ||
| MobiDBLite | 217 | 237 | 21 | - | – | |
| SUPERFAMILY | 232 | 411 | 180 | 3.48E-61 | ||
| SMART | 245 | 400 | 156 | 2.5E-90 | ||
| Pfam | 249 | 400 | 152 | 9.2E-50 | ||
| ProSiteProfiles | 250 | 396 | 147 | 57.068 | ||
| ProSiteProfiles | 373 | 582 | 210 | 13.865 | ||
| SUPERFAMILY | 411 | 588 | 178 | 2.09E-35 | – | |
| Gene3D | 421 | 487 | 67 | 3.2E-5 | – | |
| SMART | 425 | 512 | 88 | 0.0024 | ||
| SMART | 460 | 588 | 129 | 1.3E-12 | ||
| PANTHER | 486 | 607 | 122 | 1.8E-206 | – | |
| PANTHER | 486 | 607 | 122 | 1.8E-206 | – | |
| Gene3D | 488 | 607 | 120 | 6.3E-28 | – | |
| Pfam | 510 | 582 | 73 | 3.2E-14 | ||
| ProSiteProfiles | 592 | 608 | 17 | 9.282 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. | ||
| Molecular function | Histone-lysine N-methyltransferase activity | Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives. | ||
| Biological process | Histone lysine methylation | The modification of a histone by addition of one or more methyl groups to a lysine residue. |
Expression pattern of LotjaGi1g1v0655200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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