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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0014000 |
| Transcript ID | LotjaGi2g1v0014000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Histone-lysine N-methyltransferase; TAIR: AT4G13460.1 SU(VAR)3-9 homolog 9; Swiss-Prot: sp|Q9T0G7|SUVH9_ARATH Histone-lysine N-methyltransferase family member SUVH9; TrEMBL-Plants: tr|I1KKL7|I1KKL7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0014000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:5118191..5123505) extracted from Lotus japonicus Gifu genome v1.2.
CTCTCTTCTATATAAAGCCCCCTTCAGACTTCCTACTTCAGAAATTTTCTAACCAACAACAGTTCCAACCAAATTCTTCC TAAGCATATTCAGAAACACCCAGATAGAGAGAATGAAAAAACAAAAAGTGGCACCTGGCCACTGCCCAACCTAGTGCCTT CTTCTCTCATCACCACCACCACCACCACCACCTCCACCACCACCACCACCACCACCACCACCACCACCACTCCCAATGCT TCCAATCTAAACAAACCCTTCACATTTTGATTACATGATATAATAGTATTATGAGTAACAACAACAACATGGATCCTCTT CCCAGTCCTGAACACTCTAACCACCCTAATTTCCTACCCGCACCACCCGGAATCCCAACCCCAATTCTGACACCGAAGCT TGAACCTTTAGACGAATGGGTCACCACAACCCAAGATCCGACCCGCACCGATTTCTCCAACGGGACCCACCAATTCAACC TCAACTTCTTCGCCGATGAAACCCTAGCCGCTTCAATCGACGGCGGCAACGCCGACGACGACAACAACGGCAACTCACTG TACTCCGACTTCAACCGAGTCACCGACCTGTTCCGAACCGCGTTCACGACGGGGTTGCAGCAATGCCAGAACGATGACGT TTCGGACCCGAACTCGCGCGCGATCGTTCCGGTGCCTGCGGAGGATAGCGTCGAAGCGCCTCCGTCGGCTGTGGTCTCGG TGGCGCGGCAGCGGCGGTGGAAGGAGCTTGTGAGGGTGACGGATGCCGGCGTGGGGGAGCTTCAGCATTTCCGCGACGTG GTTCGGAGGACGAGGATGGTGTACGATTCGCTCCGGGTGCTGGCTGCGGCGGAGGAAGAGCGGAGGGTGGATACGCGGAG GGCGAGGAGCGATTTGAGGGCTTCAGGGTTGATGAGGACTTGTGGTTTGTGGCTGAATCGCGATAAGAGAATCGTTGGTG CGATTCCTGGGATTTGCATTGGTGATGTGTTTTTTTACAGAATGGAGTTGGTTGTTGTTGGTTTGCACGGTCAACCACAG GCTGGGATTGATTACTTGCCTGCTAGCATGAGTTCCAATGGTGAACCAATTGCAACGAGTGTGATAGTTTCGGGTGGTTA TGAGGATGATGTGGATGAGGGTGATGTGATCATCTATTCTGGGCATGGTGGCCAGGACAAGCATTCAAGGCAGGTTTTTC ATCAGAAATTGGAAGGAGGGAACCTTGCCATGGAGAGAAGCATGCATTATGGGGTCGAGGTGAGGGTTGTTCGAGGTGTT CGCTGTGAGGGCACTCTCTCTGCTTCTGGTAAGGTTTATGTTTATGATGGCTTGTATAGGATTACTGAGTGCTGGTTTGA TGTTGGGAAGTCTGGTTTCGGTGTTTACAAGTATAAGCTGTGGAGGATTGAGGGTCAGCCTAAGATGGGGAGTGCGATTT TGAAGGAGGCTCTTATGCTGAGAAGGGATCCGATGTGTATTAACCCGACATATTACATGTCTCTTGATATTTCCAATAAG AAAGAAAATGTTGCTGTGAGGCTCGTTAATGACATCGATCGAAATCCCGAGCCTCTTCTTTATGAGTATCTTGTGAGGAC TACTTTTCCGCAGTTTGTGTTTCATCAGAGTGGGAAGGCTACCGGTTGTGAGTGCGTGGACGGGTGTGTGGATGGATGCC TTTGTTCCATGAAGAATGGAGGGGAGTTTCCTTATAGTCAAAGTGGTGTTCTGTTGAGAGGGAAACCTTTAATATTTGAA TGTGGCCCCTTTTGTAGTTGTCCTCCTCACTGTAGGAACCGTGTCACGCAGAAGGGGCTGAAAAATAGGCTTGAAGTGAT TAGATCCAGGGAGACTGGTTGGGGAGTTAGGTCCTTGGACCTTATTCAAGCTGGCGCTTTTATCTGCGAGTACACAGGGG TTGTTCTGACTACAGAGCAAGCCAAAATTTTGACAATGAATGGTGATACATTGATATATCCTGGTCGGTTTTCTGAGAGG TGGGCAGAATGGGGGGATTTATCTCTGATAGACTCCACTTATGAACGTCCGAAGTATCCGTCAATTCCTCCTTTAGATTT TGCTATGGATGTATCAAGAATGAGGAATGTTGCGTGCTATATTAGTCACAGTTCAACTCCTAATGTGTTGGTTCAGTATG TTCTGTTTGATCACAATAATTTGATGTTCCCTCACCTTATGCTATTCGCAATGGAAAACATCCCTCCAATGAGAGAGCTC AGCCTTGATTATGGGGTAGCTGATGAGTTTACCGGCAAACTATCCATATGTAACTGAAAGATTTGGAAGGAATGTACACC TTATAATTGCTGAAGTTGAGTTTTGGGCATTGTTCTCAAAGGTGAAGCCAATTTATTTCATTGAACTTATTTGTTTTCAC CATCATGTTCCATCTGATTTTTATTTTGCCTTTCTCTCGTGCTTTGTCCAATCTTCAATGTAAACTCTCTCAACCATAGG AGTTATTGGCATATTAGTCATTGCAAATTATTATGTATTGTGACTTCAAGGATTGTGATAATACTTTTACAGAACTGATA AATACAAAAGCCTGCTTCGCAAACTGATTATTATCATGGTAACTCTGGTATATCATATATGAACCTTCAATTTAGTTTCT TCTGCTTCAAGCAGTTCAAACCTGTTTGCTTATGTCTTTCCCCGCTGTGTGTGTATTTAGATAGCACCTATAGTTTATTG GTGCTATATTATTTAACATATGCTCTTAGAACTCTCCTTTACCAAGATCCCTCTTTTCAAGATCAGCTTCTTTGCTAAAT GATTCATTTTATTTACAGTCACATCATGTTATGTATTATCAATTGAAAAATATTATGTTCACACTTATCCACCTACACTT CATAGGGAGAGAGATAGAAAGAGAAGAGAGAGAATTGAGAGATAAGATAAGTGATTGATAGGATGAGGTTCTTTGTTAAT TATTTGTTGGATTCGAGCCAGTCCTTTGTACTCGTGTTAGAGATAAAGAAAACGTATCTATCTGCTAAAACAGAAGGAAT GTATGCATAAACTATAAACTATTATGAAGTTATTCTTTATCAAAGCTAGCAGCATTTGCTTTGGGAAACAATATATGGTA TGGGAAGTGTTTGTTATCATTAATAGTGCATGATATACAGCTTTCAATGATATCAATAGGTCTTGGTTTATCCTTTTGAA TTGGACTACAACAGCAACAACAACCACCAAGGCTTTTACTCACTAGGTGGGCTAGGTTACAGGAATCAAATAGTGTCATT ATGAATTAAGTGAATGTTGAATTGAACTATCTATCAATATTTTATTGGCTGAACTACAAAAAGAATTTGCTTTTTATTTC TATTGTTCAGTTTGATGGGGTTAAAAATGGGGATGAAACTTTCATGGCTAGGTTTTATTAGTAAATTCCATTGAAAAATG CTCCATGAAATTTTCAGCCTGGTTCCAAACTAGTCATATAAGCTTAAAACAAGCAGCTCAATACTTTAAATAATTCATTT TCAACTGGCTAACAATCTTATAGATGTAGATTACAGTTTGCTACTAGTTATCTTTCTGCTCTTCATTATACCCCATACAA GGTGCTAATGACTAAAGTCTTCCCTCCAAATCCAATAATTGGACCAGTGAACTGAAAAGACAAAGTAAAGGTTGGATCAA GAAGAGAACTAAAAGAACTGAAAATGGAAAATGTATAGGAGATCCTTAAGTTATCACTTAAAGATAAGAAAGATGTTTTA AGGTCATTGAGATTATTGATAAATAGATGATGGTCTAAGATGATCTTTGATTCAGCGGATTATGGGGCAAACTATTGGAA GTTGCCATTATAGGCTACCTCTCTTGAATCTGTTTTTGCTAATCAGTGAGATCATCTTCAACTTGTGATAGGGAGAAACC TCCATAGGACGGCCGCACAGCCAGGATAGGCTCAAGCAGTGGAGGCGTAAACTGCTATAGGCAGTTAAGAGCAGTTAGTG GGTTAGAAACTGTTGGGTTAGTTATTATTAGTTAGTTACATCAGTTTATGTTAGTTATGTTCTATCAAAATTGCCTAGGG AGAGAACTGGCTCTCGAAGATCCGGAGTTTGTACAATTATTCTCCAGTATTCTGTCCTTATCAACTTACCTCCATGCTTG CATGGTAGAAATTAAGACAGACTAAAAATGTTAGAACTCTTGCTTTAATTAAATATCAATGTTGAATATATCTTTCTTTT CACCCAAGTTAGTACCCAGTAATGATAAATTAGACTATTATTGAATTTTTCCCTCCTCTACTTGAACAGAAGCTTATCTG CTTTAGTATTTTGTATTGAACTACTGTGATTTCATTCCATGCTTTTCCTAAGTATAAATCAGTCAGCAATTTTGTGTTGG TCTTGTATTTTACATCCTTTCCTGTTTTGCTCATTACATTATCCCCGATCGTTGTGCTATTAGTATTATTCATATTTAAG TCTGCTGATTTGTGTTAATGTTCATTTGCAGATATACAAATTGATGTATCCACCAAAAAAAATGTATTTACCAAAACAGA TATGATGCAGCAAAACTTCCATAGGATTTCAACCTCAGGAGTTTACAAGGATCAGTGGAATTAATTGTTGTATAATTCTT GTAAGGGTATCAAACATGTCAATATGATTTATTATACTGTGCTGGTTTTATCTAACTCTCGTCGGCTAGTACAATGCGCC CCTCTTGGTTTGATAGATCAGGAATGCGTTTCGATACTAGTTGAATACATCGTGAACCGACTTTCATCCAATTCTATAAG AATAGTTTCTTTTCTATAAGAATAGTTTCTTTTCGTTCACATTGTCTTAAAGCAGGTACTAACGTACATTTGTACTAGTG TCAAAAGGTATCCAAACATACTTAGTTCCCTGTGCACTTCAATCTTGAATACTTCCATAATTTTCTCTTTTGATGATATT TCTATTTTTTGTTTATTCCCTCTTTAGGCGAAGCATTTTCTTGTTTATTCCATAAGCTTGTATAGGGATATGATGTTTAT GGTTGATAATGATAGATGAATACCATGCAGCTTTTTAATTGGTTATTATGATTGGGCATCTGGTTACATAAATTGCAGGG AATAGCTAATGCTACATAAGACCATGTATGATGACTACCTTGTACTCCCTCTCTTTCAATATAAGACTCCACCTAGAGAA GATGCACACATATTAAGAAATGCAATTAACTTTGTTAGGGGATGTATCATATGAGAAAGATGTTCTTATGTGAGAAAATG AGAATAAATCATGACCGTTAGATCATGTCATGAAC
CDS sequence (LotjaGi2g1v0014000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTAACAACAACAACATGGATCCTCTTCCCAGTCCTGAACACTCTAACCACCCTAATTTCCTACCCGCACCACCCGG AATCCCAACCCCAATTCTGACACCGAAGCTTGAACCTTTAGACGAATGGGTCACCACAACCCAAGATCCGACCCGCACCG ATTTCTCCAACGGGACCCACCAATTCAACCTCAACTTCTTCGCCGATGAAACCCTAGCCGCTTCAATCGACGGCGGCAAC GCCGACGACGACAACAACGGCAACTCACTGTACTCCGACTTCAACCGAGTCACCGACCTGTTCCGAACCGCGTTCACGAC GGGGTTGCAGCAATGCCAGAACGATGACGTTTCGGACCCGAACTCGCGCGCGATCGTTCCGGTGCCTGCGGAGGATAGCG TCGAAGCGCCTCCGTCGGCTGTGGTCTCGGTGGCGCGGCAGCGGCGGTGGAAGGAGCTTGTGAGGGTGACGGATGCCGGC GTGGGGGAGCTTCAGCATTTCCGCGACGTGGTTCGGAGGACGAGGATGGTGTACGATTCGCTCCGGGTGCTGGCTGCGGC GGAGGAAGAGCGGAGGGTGGATACGCGGAGGGCGAGGAGCGATTTGAGGGCTTCAGGGTTGATGAGGACTTGTGGTTTGT GGCTGAATCGCGATAAGAGAATCGTTGGTGCGATTCCTGGGATTTGCATTGGTGATGTGTTTTTTTACAGAATGGAGTTG GTTGTTGTTGGTTTGCACGGTCAACCACAGGCTGGGATTGATTACTTGCCTGCTAGCATGAGTTCCAATGGTGAACCAAT TGCAACGAGTGTGATAGTTTCGGGTGGTTATGAGGATGATGTGGATGAGGGTGATGTGATCATCTATTCTGGGCATGGTG GCCAGGACAAGCATTCAAGGCAGGTTTTTCATCAGAAATTGGAAGGAGGGAACCTTGCCATGGAGAGAAGCATGCATTAT GGGGTCGAGGTGAGGGTTGTTCGAGGTGTTCGCTGTGAGGGCACTCTCTCTGCTTCTGGTAAGGTTTATGTTTATGATGG CTTGTATAGGATTACTGAGTGCTGGTTTGATGTTGGGAAGTCTGGTTTCGGTGTTTACAAGTATAAGCTGTGGAGGATTG AGGGTCAGCCTAAGATGGGGAGTGCGATTTTGAAGGAGGCTCTTATGCTGAGAAGGGATCCGATGTGTATTAACCCGACA TATTACATGTCTCTTGATATTTCCAATAAGAAAGAAAATGTTGCTGTGAGGCTCGTTAATGACATCGATCGAAATCCCGA GCCTCTTCTTTATGAGTATCTTGTGAGGACTACTTTTCCGCAGTTTGTGTTTCATCAGAGTGGGAAGGCTACCGGTTGTG AGTGCGTGGACGGGTGTGTGGATGGATGCCTTTGTTCCATGAAGAATGGAGGGGAGTTTCCTTATAGTCAAAGTGGTGTT CTGTTGAGAGGGAAACCTTTAATATTTGAATGTGGCCCCTTTTGTAGTTGTCCTCCTCACTGTAGGAACCGTGTCACGCA GAAGGGGCTGAAAAATAGGCTTGAAGTGATTAGATCCAGGGAGACTGGTTGGGGAGTTAGGTCCTTGGACCTTATTCAAG CTGGCGCTTTTATCTGCGAGTACACAGGGGTTGTTCTGACTACAGAGCAAGCCAAAATTTTGACAATGAATGGTGATACA TTGATATATCCTGGTCGGTTTTCTGAGAGGTGGGCAGAATGGGGGGATTTATCTCTGATAGACTCCACTTATGAACGTCC GAAGTATCCGTCAATTCCTCCTTTAGATTTTGCTATGGATGTATCAAGAATGAGGAATGTTGCGTGCTATATTAGTCACA GTTCAACTCCTAATGTGTTGGTTCAGTATGTTCTGTTTGATCACAATAATTTGATGTTCCCTCACCTTATGCTATTCGCA ATGGAAAACATCCCTCCAATGAGAGAGCTCAGCCTTGATTATGGGGTAGCTGATGAGTTTACCGGCAAACTATCCATATG TAACTGA
Protein sequence (LotjaGi2g1v0014000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSNNNNMDPLPSPEHSNHPNFLPAPPGIPTPILTPKLEPLDEWVTTTQDPTRTDFSNGTHQFNLNFFADETLAASIDGGN ADDDNNGNSLYSDFNRVTDLFRTAFTTGLQQCQNDDVSDPNSRAIVPVPAEDSVEAPPSAVVSVARQRRWKELVRVTDAG VGELQHFRDVVRRTRMVYDSLRVLAAAEEERRVDTRRARSDLRASGLMRTCGLWLNRDKRIVGAIPGICIGDVFFYRMEL VVVGLHGQPQAGIDYLPASMSSNGEPIATSVIVSGGYEDDVDEGDVIIYSGHGGQDKHSRQVFHQKLEGGNLAMERSMHY GVEVRVVRGVRCEGTLSASGKVYVYDGLYRITECWFDVGKSGFGVYKYKLWRIEGQPKMGSAILKEALMLRRDPMCINPT YYMSLDISNKKENVAVRLVNDIDRNPEPLLYEYLVRTTFPQFVFHQSGKATGCECVDGCVDGCLCSMKNGGEFPYSQSGV LLRGKPLIFECGPFCSCPPHCRNRVTQKGLKNRLEVIRSRETGWGVRSLDLIQAGAFICEYTGVVLTTEQAKILTMNGDT LIYPGRFSERWAEWGDLSLIDSTYERPKYPSIPPLDFAMDVSRMRNVACYISHSSTPNVLVQYVLFDHNNLMFPHLMLFA MENIPPMRELSLDYGVADEFTGKLSICN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 30 | 30 | - | – | |
| MobiDBLite | 16 | 30 | 15 | - | – | |
| PANTHER | 30 | 663 | 634 | 4.4E-297 | – | |
| PANTHER | 30 | 663 | 634 | 4.4E-297 | – | |
| ProSiteProfiles | 64 | 668 | 605 | 169.152 | ||
| Gene3D | 157 | 378 | 222 | 1.5E-79 | ||
| SUPERFAMILY | 205 | 385 | 181 | 4.22E-60 | ||
| SMART | 218 | 376 | 159 | 2.8E-89 | ||
| Pfam | 222 | 376 | 155 | 3.0E-47 | ||
| ProSiteProfiles | 223 | 372 | 150 | 54.307 | ||
| Gene3D | 380 | 668 | 289 | 5.8E-78 | – | |
| SUPERFAMILY | 398 | 656 | 259 | 9.94E-60 | – | |
| SMART | 404 | 496 | 93 | 1.8E-29 | ||
| Pfam | 407 | 504 | 98 | 2.2E-16 | ||
| ProSiteProfiles | 451 | 509 | 59 | 11.696 | ||
| SMART | 512 | 661 | 150 | 3.0E-27 | ||
| ProSiteProfiles | 512 | 655 | 144 | 15.234 | ||
| Pfam | 523 | 655 | 133 | 4.6E-13 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. | ||
| Biological process | Histone methylation | The modification of histones by addition of methyl groups. | ||
| Molecular function | Histone-lysine N-methyltransferase activity | Catalysis of the reaction: S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N6-methyl-L-lysine. The methylation of peptidyl-lysine in histones forms N6-methyl-L-lysine, N6,N6-dimethyl-L-lysine and N6,N6,N6-trimethyl-L-lysine derivatives. | ||
| Biological process | Histone lysine methylation | The modification of a histone by addition of one or more methyl groups to a lysine residue. |
Expression pattern of LotjaGi2g1v0014000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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