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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0060100 |
| Transcript ID | LotjaGi2g1v0060100.1 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Leucine-rich repeat receptor-like kinase; TAIR: AT5G16000.1 NSP-interacting kinase 1; Swiss-Prot: sp|Q9LFS4|NIK1_ARATH Protein NSP-INTERACTING KINASE 1; TrEMBL-Plants: tr|A0A072U648|A0A072U648_MEDTR NSP-interacting kinase-like protein; Found in the gene: LotjaGi2g1v0060100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:12719808..12725222) extracted from Lotus japonicus Gifu genome v1.2.
ATCTAGTGTTTTTGTTCTTGGCTTTATTTGCTTTGGTACACACATATATTTGCTAAAAGCTCTGTATGCTTTCTGGGCAT GTGCATGATTAACCCACAAGTGAATTTCCCATCTTCTCCTTTCCTCTCTCTCTCGTCCATATGACATTTAAATTCAGTGT TATTTGTTTATTAATTTTATTTTAGACTCATTTAACATTTCACTGCCTCTATGTTCACATGTATCACTATATGTATCTCT CTTATTCTCATCAATCTCAATGTTTACAACCAAGTATGTATGTGTTTTGATACAAATTGAGTGTAACGTGAAGAGACTTT TATCTTTGTCAAACGAAAGAGTAGAGTTCTCTTTTTTTATTTTAAAAAGTGGATGTTAATGTCTATTTGCACTGTGTTAA TAGATCTCCAAATATAGCTTAAGTAAGAGATAGAACCAAACTTAGCCTAAATAAGATATAGCCCCCAAAGTGAAAAACAC AGTTAATTTAACTTTTACCTTCAGTTGGTTCATTTTTAGCCCATACATATATTACATTGATTATTGAAAAAACCTGGCTC AATGTCAGGCATGCTAGTTCCCTTTATATTATCCTATTCATAAGCTTGTCATTTTTTCTTGGGTCTGACACAAATTTTGG TGAATGGAAAGCAAGAAGTGGTTTTCTTTCTTGTTTTGAAAATCACTGCAAAGGAAAGAACATCCTTTTGAGAACTGGTT CATGGTAGTTCCAATTGAATGGAGATGCCAAGAGGAGAAGTTGCTCTATGTTTTGTGACATTGTTCTTCTTGTTTTGGAG CTCTGCAATTGCTGTGCTCTCTCCTAAGGGTATAAACTTTGAAGGTAAAACTTGAAAATTCTGTTTCTTTCCACAAATAT TTGGCCAAAAGTGTGAAAAATATATTTCAAAATCAGTTCAATAAGGAGAATTATGAACTGGGTCTCAATTCAATATCTTT CTTAATACAGTGCAAGCTTTAATTGGCATAAAAGCTTCTCTTGTGGATCCTCATGGTGTTCTAGAGAACTGGGATAGGGA TGCAGTTGATCCTTGTAGCTGGAATATGGTCATGTGCTCCCCAGAAAACCTTGTCATTAGTCTGTGAGTCTTCCTTCCAT CTTCTACATTTGAAGTTGAAATTCAATGCGGACCAAAGAGCGCTTATTGATCTTATTCAGTGTTTTTTCTAGTAGATAAG TTTCAACAAATGTTCTTTCGTTCGAGTCCAAGCGGAATCTTAGTAGCAAAACAAAGCTTGAAATTACTGTTGAACACTCC ACAGCAGTACCAAGCTTGTACTGCAAAATGCTTTAATTTAACACTTTGATGAATCTGGTCCTGATGGGTGCAGGGGCATT CCCAGTCAAGGTTTATCTGGTATTCTATCTCCAAGCATAGGAAACCTCACAAATCTTCAGACTGTGTAAGTAAGCACAGT ATAATTTAGAACTCTCAAGTCTCAAGTACATGTTTCTTATATCTGTTGCTTCCATTGTTACTAAGTTGGGTATTCTGTTG CGGACTACTTTTCAGAGGGCTACAGAATAACAACATAAATGGCCCAATCCCTTCAAAGTTGGGAAAACTTTCCAAGCTTC AAACTCTTGATCTCTCTGATAATTTCTTCAGTGGGGAAATTCCTCCATCTCTGGGTCATCTGAGAAGCCTCCAGTACTTG TAAGCATCTATGATGGAAGTTCAGAAGATGTCATACTATCAGTAACTTGATTTCTAGAGCTAATGTAAAATGATTTCAGG CGGCTCAACAATAACAGTTTTACTGGGGAATGCCCAGAGTCACTGGCTAACATGACAGAGCTAGCTTTTCTGTGATCTCC ATGACCTTTATTCCTCTTCTATTTGGTATATTCATTTTATTATTATCTGTATTTCTGAGGACGACTTGTTAATGATAATC AATTCAGGGACCTGTCCTTCAACAATCTGAGTGGCCCTGTTCCTAGAATTTTGGCCAAATCATTCAGGTTAGTCCACCCC CACCACACACACACAATCTAAGTAAAAGGAACACATGTTCAATGGGAGTGAACAATGAATTGTTATTCAACAGAACTGAA ATTGTTACACTGGTTCTCCTTATACATAATGTGTAGTCTATGTTAAGTAAACTGATCTATCATATACAATATAACTATCA CGAATTGGTTATAACAGAAAATAACTAATTGTGAAACAGAAATGAAAAACTATAACTAACAGAACTAACAGTGTAACTGA GCTAAAGTAGATATAAATGTTTCATTATCTAATACACACAAGTATGTAAGTCTCACTATCTGAAAAATTCAGAAAAGTCA GTACTAACCTCAAAATTCTTCATTCCCTTGTGTTGTTTTAGTATTGTTGGAAATCCCCTTGTCTGTGCTACAGGAAAAGA AGCACACTGCCCTGGGATGACACCCATGCCTATGTCCATGAATTTAAACAGCACTGAGGGTAAGATCCTTTAATTTCTGA ATTTGAAGGGGTTTGCCTGAAAATCTTTTCATTACATCACATTCCCACATGTTTTAAAAAAATAGCAACCTGGAAGATAG CTCCCGCTATGCCCAGAGTGCAGCGAAGAGTCCGACCACTTAGTCTATTGTACTCACTCTTACCCTAATTTTACACAAGA GTCTGTTTCCAGGACTTAAACCGTGACCTTAGTCACATGACAACAACTTTTTACTGTTGCGCCAGGGCCCCCCTTCACAT TCGCACTTGTTTTACCTTCTTATATTCTGCACAGTTATTATATAGATGTTCACAGAAATCTCTTTGCTTCTCTAGATGCT GCTATACAATCTGGCAGACCAAAAACTCACAAAATGGCCATCGCCTTTGGTTCGAGTCTGGGGTTCCTCTGCTTGATAGT TCTTGGTTTTGTACTTGTTCTGTGGAGGAGGCACAAGAATAATCAACAAGCATTCTTTGATGTTAAAGGTTCAATTCCAA CTTAAAATCATTATATAAGAATCTAATTGTACAGCATAGATTAACATATTTGATCCAATATTAATAGTTTCTTCTTTTTC TGTCCTAAATTCTTTGTACAGACCGGCATCATGAAGAAGTCTACCTAGGAAACTTGAAGAGGTTCATATTAAGAGAACTC CAGATTGCCACTAACAACTTCAGCAACAAACAAATCCTGGGAAAGGGTGGTTTTGGAAATGTCTACAAAGGAGTTCTCTC AGATGGAACTTTTGTAGCTGTCAAGAGGCTTAAAGATGGCAGTGCCATTGGGGGAGAGATACAATTTCAGACCGAAGTCG AAATGATCAGCTTGGCAGTGCACCGGAATCTCCTGAAACTGTATGGGTTTTGTGTGACACCAACAGAAAGGCTTCTGGTT TACCCTTACATGTCCAATGGCAGTGTTGATTCTCGTCTCAAGGGTGAGCTAAATTGTAAGAATTTCATAGGGCATGCTTG AAAATCTTTCTCAATTACCGCACCAGTTGAGGATTGCGTATGATATGAAGCTACTGTGAGTAGTTTCTGTGTAAATTACG CAATTCTGAGCCGGTAGAATCGAAATCAAACATGTTGATAGTAATACATTTAGCCATGATTCATTATACAGCATTATAGC ATTGTTTGATTCTTGTAGTTGAATCCAATTATGGGAAATGCTTTGTTTTTTGCTGTAAATTTAGACTATAAGGCTGTTTG AACACGGACCAAAGAACACTTTTTGAAACTTATCCAGTGCTTTAACAGATAGATAAACTTCGATTAAGGCTTTTCAGTCC GTATCGGAACGAGCTCTAGGTAAATTGAGTGGCTGATTCATATAGCTATTTTGGATATCTCCAGGTAAACCTGTCTTGGA CTGGAGGACTAGGAAGCAAATTGCCTTAGGAGCAGCAAGGGGATTGTTATACCTTCATGAGCAGTGTGATCCAAAGATAA TCCATAGAGATGTGAAAGCTGCAAATATATTGCTTGATGATTATTGTGAGGCAGTTGTTGGAGATTTTGGGTTGGCAAAG CTTTTAGATCACAAAGATTCACATGTCACAACTGCTGTAAGGGGCACTGTGGGGCACATTGCACCAGAATATCTCTCCAC AGGACAGTCTTCTGAAAAGACTGATGTCTTCGGATTTGGCATTTTGCTTCTTGAATTGGTCACTGGCCACAGAGCTCTAG AATTTGGGAAGGTAGCATACCAAAAAGGAGCCATGCTTGATTGGGTAACCTTTCCTCCCTTTATCATTCATTTAAATCCT TCTTCTTTACCTTAAACGTATGAAGTTGAAATTATTTGAAATTGCGTCGGCCCTAACTCTACCCTAAAAGCTAGCTTATG AGTGATGTATATATCTAGTCAATGTGAGACCTTTAATACCCTTTACGCTCAGAACTAGACATGTTAAGCATGGAGATAAC AAAACTTACACTCAGGCAGGTCAGGTTGATTGCCCGTATCCCCATTACAACATATATATTGGATGGGTCAGGTCAATTAT TTATATTCAATTTCAGCGGGTGGCCCATCACGGGTGACCGAACAATGGATCTAGGATTAACTCTAATAGCTTATTAGAAT TTGTATTAGGTCAATCACAACTCAAAAGTTTGCTTAGGGTGAGGATTGTCCTACTCTTTATAAGTACTCCGGATGCTATA TCTCTGGTCAATATATGACATATTTTAACACTTATATTGTTGATGACTTGACATTTAGGTAAAGAAAATTCATCAGGAGA AGCAACTTGAGTTGCTTATTGACAAGGATCTGAAGAACAACTATGACAGGATTGAGCTGGAGGAAATGGTTCAAGTGGCA CTCTTGTGCACACAATATCTTCCAGGGCACAGACCCAAAATGTCTGAAGTTGTACGCATGCTTGAAGGTGATGGGCTAGT AGATAAATGGGAAGCATCACAAAATGCTGACACAACTAAGTGCAAACCACATGAGCTCTCTGCATCAAATAGATATTCTG ATCTTACTGATGACTCTTCATTTTTAGTCCAGGCCATGGAGCTCTCAGGTCCAAGGTGAAAGTTTTCTAGTCACATTTAG TTTTTTTTTGTTCTAGTTTTCTAAAGGAACCAGATGAAATGCTTTTATATGTTGTGGGATAGAAGTCTTCAAAGCTGAAA AGGGCTCTTATTTTCCCCAAATGTACAGATACTTCTTTGTTGAGCATGAATTTGTAATGCAAAATTTTGGAGTAATCTTT TGTTCACACCTCAAAGTTGAGGTAGAAAGAGGTAGAGGAGGAGAGAGATAGGAAGAAAAAAGAGAAAGTAAATATGTGAT ATATGATTTGATTGATAGAGAAGAGTGAAATAGATAAAAAAAAAATAAAGGTGGAAAAGCAAGGGAAGGTGTGAATGAAA CATGTCTCAAAATTTTGTGAAATATAAAGTAAAGAGTACCGCTACATGTTATGGG
CDS sequence (LotjaGi2g1v0060100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGATGCCAAGAGGAGAAGTTGCTCTATGTTTTGTGACATTGTTCTTCTTGTTTTGGAGCTCTGCAATTGCTGTGCT CTCTCCTAAGGGTATAAACTTTGAAGTGCAAGCTTTAATTGGCATAAAAGCTTCTCTTGTGGATCCTCATGGTGTTCTAG AGAACTGGGATAGGGATGCAGTTGATCCTTGTAGCTGGAATATGGTCATGTGCTCCCCAGAAAACCTTGTCATTAGTCTG GGCATTCCCAGTCAAGGTTTATCTGGTATTCTATCTCCAAGCATAGGAAACCTCACAAATCTTCAGACTGTAGGGCTACA GAATAACAACATAAATGGCCCAATCCCTTCAAAGTTGGGAAAACTTTCCAAGCTTCAAACTCTTGATCTCTCTGATAATT TCTTCAGTGGGGAAATTCCTCCATCTCTGGGTCATCTGAGAAGCCTCCAGTACTTGCGGCTCAACAATAACAGTTTTACT GGGGAATGCCCAGAGTCACTGGCTAACATGACAGAGCTAGCTTTTCTGTGA
Protein sequence (LotjaGi2g1v0060100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEMPRGEVALCFVTLFFLFWSSAIAVLSPKGINFEVQALIGIKASLVDPHGVLENWDRDAVDPCSWNMVMCSPENLVISL GIPSQGLSGILSPSIGNLTNLQTVGLQNNNINGPIPSKLGKLSKLQTLDLSDNFFSGEIPPSLGHLRSLQYLRLNNNSFT GECPESLANMTELAFL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 25 | 25 | - | – | |
| SignalP_EUK | 1 | 25 | 25 | - | – | |
| Phobius | 1 | 7 | 7 | - | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| Phobius | 8 | 20 | 13 | - | – | |
| Phobius | 21 | 25 | 5 | - | – | |
| PANTHER | 23 | 109 | 87 | 1.8E-38 | – | |
| PANTHER | 23 | 109 | 87 | 1.8E-38 | – | |
| Phobius | 26 | 176 | 151 | - | – | |
| Gene3D | 28 | 176 | 149 | 2.9E-49 | ||
| SUPERFAMILY | 35 | 176 | 142 | 1.21E-32 | – | |
| Pfam | 35 | 72 | 38 | 1.8E-13 | ||
| PANTHER | 78 | 140 | 63 | 1.8E-38 | – | |
| PANTHER | 78 | 140 | 63 | 1.8E-38 | – | |
| Pfam | 99 | 158 | 60 | 1.6E-8 | ||
| PANTHER | 101 | 175 | 75 | 1.8E-38 | – | |
| PANTHER | 101 | 175 | 75 | 1.8E-38 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0060100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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