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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0118600 |
| Transcript ID | LotjaGi2g1v0118600.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|K7LWN7|K7LWN7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0118600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:43457914..43463002) extracted from Lotus japonicus Gifu genome v1.2.
CCTGTATTTCCAAAATTTTGTTTCTAAACCTACATGTGGAAACCTGCACCATCATTTCAATCGTTGGCTGATCACGATCT CTAGATGTCATTGCACCATCATTTCAATCATTGGCTGATCACGATCTCTAGATGTCATCCTCCCGGTCATCAATAAGCCT TGACAAGTAAAACCCTATCGCAAACAAGAATAATCTACTGGGCCACTTACCGCAGATAATTCAACTTTTTTTGTCTTTTG AGTGGACAGTCATTGATTATAAAACTCATAACTCAGAAGTCAGAATTCATCTTGGTGTACTGAATAACCACTCGCCGACA GTCATTGATTTACAAATCTCATAACTCATCTTGCTGTACTTAATAATCACTCGCCACTCAATCATTGCTTGCACTAGTTG AAGTTGTCTAGCTGAGCTCTTTGCATTCACAAATTTCAGGTTCGAGTATCATGGAAAAGGGAAGAGCAGAATCCTCATCT TCTTTCAAACACGAGTGGACATACGATGTCTTCCTTAGTTTCAGAGGTGAAGACACCAGGTTCAATATCACAGGCAATAT CTATAATTCTCTGGTCAAAAAAGGGATTCACACTTTCATGGATGATGAAGAGCTTAGAAAAGGGAAAAAAATTACACCAG CTCTTCTAAAGGCAATTCAGAAATCCAGAATTGCAATAATCATTTTCTCTAAGAATTATGCATCATCCACGTATTGCTTG GATGAACTTGTTGAGATTCTTAAGCTTGTCAATGCAGAAGGTAGATTGGTATTGCCAGTTTTTTATGATGTGGATCCATC ACTAGTTCGCCATCAGAGAGGAACTTATTCAGAAGCCATGGCGAAACATGAGGAAAGGTTCCCAAAAAACAAGGGCAAGG TACAAAAGTGGAGAGGAGCTTTACGTGAAGCAGCTGATCTCTCAGGCTGGCATTTCCAAAACGGGTATCTCACACTTTCC ATTCATATATATATATGTTATTGCCTCTGCTTTGATTGAGTTAAGTTATGTTCACACCTTTGCACTCAACACTTCTAGAG AGATATAGGAATCTAGGAAGAGAAATTAGTGATATGATATGTGATGCGATCGAAACTGTAGAGGGGGGACAGGAAGAAAA ACAAGGTGGAAATGAATTGTAAGAGATGGTAGAGTGTGAAAATATCACAACTCGCTTTAATTTTCTGTTTGCCTAATGAA TTTCGTGTTAAGAATAATGTGTAAATTGATATAAAGATGAATGAAATTGACTTAATAGAGAAATTAATTTATGATGAGTA ATTCATTTTCATTGAAGTGTTAAACTAAAGGAAATTCCAACTTTTTAATGGACAGTTCTGAGTCAGAATATAAGCTTATT GATAAGATTGTTGAAGAGGTCTCGAAAAAGATCAATCGAGTTCCTTTGCATGTTGTTGATAATCCAGTTGATCTAGACTC TGCGGTGCTTCAAGTGAGTTCTCTCCTTGGACTTGGGTCTGAAGTGATCATGGTAGGTATTTACGGATTTGGAGGACAAG GTAAAACAACAATTGCCCGTGCTGTGTATAACTTGATTGCTGACCAATTTGAAAGTTTGTGTTTTCTTGCTGACATAAGA GAAACGGCAATTGGTAAGCTTGGCCTTGTACAACTCCAAGAAACTCTTCTTTCTGAAATACTTGGAGAGAAAGACATCAA AGTTGGAAATGTCAATCAAGGAATTCCAATAATCAAAAGGAGCTCAATTGAAGGCACTCGCGGAGGAATTGATTGGTTTG GCTCTGGCAGTAAGATCATTATCACAACAAGAGACAAACAATTGTTAAATTCTCATGGAGTAGTAAGATTACACGAGGTT AAACTGTTGAGCCATCAAAAAGCTCTTGAACTGTTTAGTTGGCACGCCTTTAAAAGTCATGAAGTTAAAAGTGGTTATGT GAAAATTTCAAAGCGTGCAGTTTCTTATGCACGTGGCCTTCCATTGGCTTTGGAAGTCATAGGTTCTCACTTATGCGATA AAAGTTTAGATGAATGTAAGTCAGCATTGGATAAATATGAAAAAGTTCCTCATCAAGATATCCATGAAATTCTTAAAGTA AGCTTTGATGGTTTGGGGGATGATGAGAAAGGAATTTTCCTTGACATTGCTTGTTTCTTCAACAAAGGCGAAGTGGAGTA TGTAAAACAAATGTTACATGCTCATGGATTTCATGCAGAAGATGGTATTAGAGTATTAGCTGGTAGATCTCTTATAAAGA TTGATAGTTGTGTAGCAAAACTGAGAATGCATGCCTTAGTTCAAGACATGGGTAGAGAAATTGTACGACAAGAGTCAATA CGTGAGCCTGGTGGACGTAGTAGATTATGGTTTGACGAAGACATCATTCATGTTTTGGAGGAAAATACGGTATGTGTGAA ATTATAATCATCTCTGCATTTCTTCTCTTTTTCACTTCTTTATTTATCCTTTGTTATATATATCCTTTAGATCTCAATAT TCTTATTCCTCCTTTCTCAATTTCATGTTCAATGAAGTTTATCAAAAACATAATATACTTCGTTTTTATATTGGTAAATT TTATAAAATATGTAGATGATATAGCTAACTTGCACATTGTGTGATTAAATTGTACTTTGGCCATGGAAGGGAACTGAGAA AGTTGAACTGATAATGCTTGATGGTTGCAAAAACAAAGAAGTGCAGTGCAGTGGAAAAGCCTTCATGAAGATGAAAAACC TGAGAATTCTAGTGGTTGACAATGCAGTGTTTTCTACAGGGCCCAAACGTTTACCAAATAGTTTGAAGGTGCTTAGTTGG AATTGTTATCCATCACAGTCTTTACCCTCTGATTTCAATCCTAAACAACTTGAGATGCTACATATGAGAGAAAGCTGCCT TGAATTCTTCCAACCTCCCAAGGCATGTAGCAGTTTCAATTTTTTTTAGATATTATGAATTTCCACCTAATAATTGATAA CTTGAGTTGTTTGCCTTTATTCTGCAGATGTTGAAAACCTTAACTGTACTTTATTTTGAAAAATGCAAGTTCTTAACCGA ATTGCCAAGCCTAAGTGGAGCAACATTCTTGAAGAAGCTGTCCCTTGATAACTGCACAAAGTTAGTTAAAGTTCATGATT CAGTTGGGTTTCTCAAGAATCTCCACTGCTTGAGCGCTAAAGGATGCACCCAGCTAGAAAATCTGGTGCCCTGCATCAAG CTGGCATCTCTAGAAATTCTAGATCTCCAGGGGTGCTCACGTCTAAAGAGATTTCCGGAAGTATTGGGAAAGATGAAGAA AATAAGAGAAATTAATTTAGACAAGACTGCCATAGACAAGTTGCCATTATCTATTGGAAATCTTATTGGGCTTGAACAAT TGTCCATCAAGAAACGCGGAAAGCATGTTATTCAGCTACCAGACAGTATCCATGCATTGACTAAAGTTGTGGTGGTTACG AGTGACAAGCCTCAGGGCTTTAGATTTTTTAGAAGGAGCCATAAGAATGAAAGATTGGGCTCAGAAATATCACCAAGTTC AATGCTTGTTTATCAAGGTGCTCGGCGAGAAATGAGTGATTTCACCACCTTTGATGTGTATTATTCGTTCATGAGCCCCA ATAATGTTATCGAAGTATGTATTCCCATGCCTCTAGTGCATCATGATTTTGAAATGTTGTTCCCAAAGATGCCAACCGAT TTCCAGAACCGACTTACTAAATCATCAATGTGCTTCTCATTTCGAAAGAAGTTCCCTAGGATCGCCCTATGTTACCATGT TAGTCCCAACTCTACTGGAAGCCTGATGTCGGATTTCAAGTTCAGCGTACTCATTAATGGCGCCAAACAGTTCAGTTCTT CATGTGCCTGCATAGCTCATTCAACACGGGGCCTAATATTTTGGTGTGATCTACAGAGCAAAGTGGATGAGGTATTTACA GAACATGATTGGAATGAAGTTGAAATTCAATGGGAGTTAAACAAACAGAAATCAAATTCTAAAAGTGGAACAATGGACGA TCACTGGGAGGGAAATGGATGTTTATGCTGGACCCTAATCGGTCTCTACAAAAAAGGAAACAACAAGCAAAGAGTTAAAT TTGAAAATCCTACGTCAGATTTTCCATTGCCCTGCTGCTCCCCTACTACACTTTTACACGCGATGGGTCATCAGATAAAG CTTCAATCACACGTCTTAAAAAGTGAAAATGAAGTGAAGAGAAGATAGAGATAGGAAAAAAAGAGAAAGTAAAAGATATC ATAGATGATATGATTGAAAGAGAAGAGAGATAGATAGAAAGTGAAGTGGAAATGAAGTGGATGGGTGAATGAACGGTAGC CCTATGTCATCTTTTCCCCCATTTTCGATAAGGTCTCTAACTCTCTATACATTCACACTCCATTATTTTCCAACCTCATT TCCATTTTATCTTTTATTTCTTTCATTCTCATTTTTTTTTTCTATGACATTAGTATCATATTTTTTATTTATTTCTTCTA TTCATATCTCTTTGTGGGTGCTGATGAAGAGAGGAACATGTTTCCATGGAGCTTATTGGCTCCTCTACCCTTCTTGCCAT AGGTTCCCTCTAGCGAAACACTCACAGGAACTTCTCACTTTCTCCCCCAGCTAAGGAGGAGGCACAGCCAGTGGTGCAGG AGGCACCGGCTGCAGAGGCACTAGCCTAGCTAGATCGGAGGGCAGCTGATGAGCCCGGTGTACCGCATGTTGAACACACC CGAGATATTGGTGCGGATGCTGATTTTCACTCTAGTGACATTGCTTCACAGTTGCTAGAGTGGATGACTTGACGCGGACC ATCCAGGCGGAGATTCAACACGAGGCCTAACATTTTGGTATGATCTACAAAGAAAAGTGGAAGAGGTATTTACATAGATC ACTAAAGTTGTAACTCTTGAATGATCCTTCTCTTTTTGATCAAATTGAATGCTTGAATCAGGAAAACTGCCTTTATCTTT CTCCATTAATTTTGTTGAGTGTACTTAGGCTGAGTAAACCAAGGTGACTTGTTGATAATGATGGTCGCTTGCTTCTTGAC CAGGATGAGCTTTCAATTGGATGCTACTATCTTGATTTCTCTCTCAATG
CDS sequence (LotjaGi2g1v0118600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAAAGGGAAGAGCAGAATCCTCATCTTCTTTCAAACACGAGTGGACATACGATGTCTTCCTTAGTTTCAGAGGTGA AGACACCAGGTTCAATATCACAGGCAATATCTATAATTCTCTGGTCAAAAAAGGGATTCACACTTTCATGGATGATGAAG AGCTTAGAAAAGGGAAAAAAATTACACCAGCTCTTCTAAAGGCAATTCAGAAATCCAGAATTGCAATAATCATTTTCTCT AAGAATTATGCATCATCCACGTATTGCTTGGATGAACTTGTTGAGATTCTTAAGCTTGTCAATGCAGAAGGTAGATTGGT ATTGCCAGTTTTTTATGATGTGGATCCATCACTAGTTCGCCATCAGAGAGGAACTTATTCAGAAGCCATGGCGAAACATG AGGAAAGGTTCCCAAAAAACAAGGGCAAGGTACAAAAGTGGAGAGGAGCTTTACGTGAAGCAGCTGATCTCTCAGGCTGG CATTTCCAAAACGGTTCTGAGTCAGAATATAAGCTTATTGATAAGATTGTTGAAGAGGTCTCGAAAAAGATCAATCGAGT TCCTTTGCATGTTGTTGATAATCCAGTTGATCTAGACTCTGCGGTGCTTCAAGTGAGTTCTCTCCTTGGACTTGGGTCTG AAGTGATCATGGTAGGTATTTACGGATTTGGAGGACAAGGTAAAACAACAATTGCCCGTGCTGTGTATAACTTGATTGCT GACCAATTTGAAAGTTTGTGTTTTCTTGCTGACATAAGAGAAACGGCAATTGGTAAGCTTGGCCTTGTACAACTCCAAGA AACTCTTCTTTCTGAAATACTTGGAGAGAAAGACATCAAAGTTGGAAATGTCAATCAAGGAATTCCAATAATCAAAAGGA GCTCAATTGAAGGCACTCGCGGAGGAATTGATTGGTTTGGCTCTGGCAGTAAGATCATTATCACAACAAGAGACAAACAA TTGTTAAATTCTCATGGAGTAGTAAGATTACACGAGGTTAAACTGTTGAGCCATCAAAAAGCTCTTGAACTGTTTAGTTG GCACGCCTTTAAAAGTCATGAAGTTAAAAGTGGTTATGTGAAAATTTCAAAGCGTGCAGTTTCTTATGCACGTGGCCTTC CATTGGCTTTGGAAGTCATAGGTTCTCACTTATGCGATAAAAGTTTAGATGAATGTAAGTCAGCATTGGATAAATATGAA AAAGTTCCTCATCAAGATATCCATGAAATTCTTAAAGTAAGCTTTGATGGTTTGGGGGATGATGAGAAAGGAATTTTCCT TGACATTGCTTGTTTCTTCAACAAAGGCGAAGTGGAGTATGTAAAACAAATGTTACATGCTCATGGATTTCATGCAGAAG ATGGTATTAGAGTATTAGCTGGTAGATCTCTTATAAAGATTGATAGTTGTGTAGCAAAACTGAGAATGCATGCCTTAGTT CAAGACATGGGTAGAGAAATTGTACGACAAGAGTCAATACGTGAGCCTGGTGGACGTAGTAGATTATGGTTTGACGAAGA CATCATTCATGTTTTGGAGGAAAATACGGGAACTGAGAAAGTTGAACTGATAATGCTTGATGGTTGCAAAAACAAAGAAG TGCAGTGCAGTGGAAAAGCCTTCATGAAGATGAAAAACCTGAGAATTCTAGTGGTTGACAATGCAGTGTTTTCTACAGGG CCCAAACGTTTACCAAATAGTTTGAAGGTGCTTAGTTGGAATTGTTATCCATCACAGTCTTTACCCTCTGATTTCAATCC TAAACAACTTGAGATGCTACATATGAGAGAAAGCTGCCTTGAATTCTTCCAACCTCCCAAGATGTTGAAAACCTTAACTG TACTTTATTTTGAAAAATGCAAGTTCTTAACCGAATTGCCAAGCCTAAGTGGAGCAACATTCTTGAAGAAGCTGTCCCTT GATAACTGCACAAAGTTAGTTAAAGTTCATGATTCAGTTGGGTTTCTCAAGAATCTCCACTGCTTGAGCGCTAAAGGATG CACCCAGCTAGAAAATCTGGTGCCCTGCATCAAGCTGGCATCTCTAGAAATTCTAGATCTCCAGGGGTGCTCACGTCTAA AGAGATTTCCGGAAGTATTGGGAAAGATGAAGAAAATAAGAGAAATTAATTTAGACAAGACTGCCATAGACAAGTTGCCA TTATCTATTGGAAATCTTATTGGGCTTGAACAATTGTCCATCAAGAAACGCGGAAAGCATGTTATTCAGCTACCAGACAG TATCCATGCATTGACTAAAGTTGTGGTGGTTACGAGTGACAAGCCTCAGGGCTTTAGATTTTTTAGAAGGAGCCATAAGA ATGAAAGATTGGGCTCAGAAATATCACCAAGTTCAATGCTTGTTTATCAAGGTGCTCGGCGAGAAATGAGTGATTTCACC ACCTTTGATGTGTATTATTCGTTCATGAGCCCCAATAATGTTATCGAAGTATGTATTCCCATGCCTCTAGTGCATCATGA TTTTGAAATGTTGTTCCCAAAGATGCCAACCGATTTCCAGAACCGACTTACTAAATCATCAATGTGCTTCTCATTTCGAA AGAAGTTCCCTAGGATCGCCCTATGTTACCATGTTAGTCCCAACTCTACTGGAAGCCTGATGTCGGATTTCAAGTTCAGC GTACTCATTAATGGCGCCAAACAGTTCAGTTCTTCATGTGCCTGCATAGCTCATTCAACACGGGGCCTAATATTTTGGTG TGATCTACAGAGCAAAGTGGATGAGGTATTTACAGAACATGATTGGAATGAAGTTGAAATTCAATGGGAGTTAAACAAAC AGAAATCAAATTCTAAAAGTGGAACAATGGACGATCACTGGGAGGGAAATGGATGTTTATGCTGGACCCTAATCGGTCTC TACAAAAAAGGAAACAACAAGCAAAGAGTTAAATTTGAAAATCCTACGTCAGATTTTCCATTGCCCTGCTGCTCCCCTAC TACACTTTTACACGCGATGGGTCATCAGATAAAGCTTCAATCACACGTCTTAAAAAGTGAAAATGAAGTGAAGAGAAGAT AG
Protein sequence (LotjaGi2g1v0118600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEKGRAESSSSFKHEWTYDVFLSFRGEDTRFNITGNIYNSLVKKGIHTFMDDEELRKGKKITPALLKAIQKSRIAIIIFS KNYASSTYCLDELVEILKLVNAEGRLVLPVFYDVDPSLVRHQRGTYSEAMAKHEERFPKNKGKVQKWRGALREAADLSGW HFQNGSESEYKLIDKIVEEVSKKINRVPLHVVDNPVDLDSAVLQVSSLLGLGSEVIMVGIYGFGGQGKTTIARAVYNLIA DQFESLCFLADIRETAIGKLGLVQLQETLLSEILGEKDIKVGNVNQGIPIIKRSSIEGTRGGIDWFGSGSKIIITTRDKQ LLNSHGVVRLHEVKLLSHQKALELFSWHAFKSHEVKSGYVKISKRAVSYARGLPLALEVIGSHLCDKSLDECKSALDKYE KVPHQDIHEILKVSFDGLGDDEKGIFLDIACFFNKGEVEYVKQMLHAHGFHAEDGIRVLAGRSLIKIDSCVAKLRMHALV QDMGREIVRQESIREPGGRSRLWFDEDIIHVLEENTGTEKVELIMLDGCKNKEVQCSGKAFMKMKNLRILVVDNAVFSTG PKRLPNSLKVLSWNCYPSQSLPSDFNPKQLEMLHMRESCLEFFQPPKMLKTLTVLYFEKCKFLTELPSLSGATFLKKLSL DNCTKLVKVHDSVGFLKNLHCLSAKGCTQLENLVPCIKLASLEILDLQGCSRLKRFPEVLGKMKKIREINLDKTAIDKLP LSIGNLIGLEQLSIKKRGKHVIQLPDSIHALTKVVVVTSDKPQGFRFFRRSHKNERLGSEISPSSMLVYQGARREMSDFT TFDVYYSFMSPNNVIEVCIPMPLVHHDFEMLFPKMPTDFQNRLTKSSMCFSFRKKFPRIALCYHVSPNSTGSLMSDFKFS VLINGAKQFSSSCACIAHSTRGLIFWCDLQSKVDEVFTEHDWNEVEIQWELNKQKSNSKSGTMDDHWEGNGCLCWTLIGL YKKGNNKQRVKFENPTSDFPLPCCSPTTLLHAMGHQIKLQSHVLKSENEVKRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 8 | 160 | 153 | 7.32E-41 | ||
| Gene3D | 10 | 184 | 175 | 5.2E-68 | ||
| PANTHER | 15 | 751 | 737 | 1.2E-251 | – | |
| PANTHER | 15 | 751 | 737 | 1.2E-251 | – | |
| ProSiteProfiles | 16 | 157 | 142 | 27.002 | ||
| SMART | 17 | 157 | 141 | 2.2E-43 | ||
| Pfam | 18 | 186 | 169 | 3.0E-43 | ||
| SUPERFAMILY | 184 | 429 | 246 | 6.32E-47 | ||
| Gene3D | 185 | 330 | 146 | 6.5E-15 | – | |
| PRINTS | 217 | 232 | 16 | 2.4E-17 | – | |
| Pfam | 308 | 402 | 95 | 1.9E-11 | ||
| PRINTS | 370 | 384 | 15 | 2.4E-17 | – | |
| SUPERFAMILY | 406 | 513 | 108 | 2.99E-18 | ||
| Gene3D | 506 | 763 | 258 | 6.6E-29 | ||
| SUPERFAMILY | 521 | 746 | 226 | 9.52E-32 | – | |
| PRINTS | 677 | 693 | 17 | 2.4E-17 | – | |
| PANTHER | 805 | 938 | 134 | 1.2E-251 | – | |
| PANTHER | 805 | 938 | 134 | 1.2E-251 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. | ||
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi2g1v0118600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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