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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0126600 |
| Transcript ID | LotjaGi2g1v0126600.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | RNA 3-terminal phosphate cyclase-like protein, putative; TAIR: AT5G22100.1 RNA cyclase family protein; Swiss-Prot: sp|Q9C578|RCL1_ARATH Probable RNA 3'-terminal phosphate cyclase-like protein; TrEMBL-Plants: tr|A0A151S8V9|A0A151S8V9_CAJCA Putative RNA 3'-terminal phosphate cyclase-like protein; Found in the gene: LotjaGi2g1v0126600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:46458658..46467948) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGGAAGATGGCTTACAAGAGGTTGAAGGGAAGCCAGAGCTTCCGGCAACGGTTGCTTCTCGCCACTCTTTCCTCCAC TCCCATTCTCATTGAGGACATACGCGCTGATGAGACGTGGCCTGGTCTTCACAGCCACGAGATTTCGCTCCTCCGGTTGT TTGAGATGGTTTGCGATGATTGTCATGTTGAAATCAATGAAACTGGTAATTTGTAATTTTGTTAGTTGAGGTTGGCTGCT ATAATAAATGGGGATTTCGCTCCTCTAAAGTGAGAGTCACTTTATATGGTAAAGTCGAAAAAATTAATGGTTGAGATTTG AAGAATACCATAACTTGTTGTACATGTGCAAGTTTATGATTACAATTTCAACTGTTGATTTTTAGTTAATGATTGTGATG ACATGGGTATTTTGCTTCTCTAAAGTGAGATAGTCACTTTATATGGTATAGTCGAAAAATTAGTGACTGACTCACTTTAG AGGGGAGCCAAATCCATAACATGGAATTTATTCTCATTGTGCATGGACAGGTACTAAATTGAAGTACAAGCCGGGAACTA TTATGGGTGGCAAACAATATCATGCCCACGAGTGTGGTCTCTCAAGATCCATTGGTTATTTCCTAGAGCCACTCATTGTG CTAGGTTTATTTGCAAAGGAACCCCTCACCATCAAGCTCAAAGGTATAACTCTGATTTCCTGTTGCTCTTTCTTTTTGTT AAGTTCACTCAGTTTCTTGTTTGTCCTTAACGAGACATTCATGCTGTGATATAAGTCAGATACTGTTGGAAACTTATTCT TGCACTACTAAAGGGCTACGTACTTTTTAAACAACCTTTTTGGGATTATCTGAGAGCATTGAGTGTGTCCTTTACCAATT TTTTTGTGGTTTGGTTTAATATAAAGGTTTTTCTTAGAATGAGGTAGACCAATTTTAAATTTCAGCTACAGTTATTAGTC CTATGGAGTGGATGGTTGGAATGCAATGCAGCATGTCTATCTTCTCCTTTTTCTTTTTGCCATGGACTAATATTTGTAAC CTTAAAGTGGTTTCTCTGCGTCCAATTTTGATTTGGGGTCGAATTATGTTTTATGCTTCTCGTGATGTTTTGCTCTTCTG CTCATGGATGCTTCTACAGTGTTTGCTATCATGAACTTGCACCTTGTTTTTTTTCTTTATTGATATATATATTTTTTTAA ATCATGTTGTTAACTTTCCTGCCTAGTTGTATTTCTTCTTATCTCTCTAATGATGTTTCTTCAATTAAAAGAAAGAAATA AAAAGATAAAGAAAGCACTTAAAGCTTCAAAACTAGAACAGAAGGACCATTCAAAAAATATCCTGATGGTGCAAATTAAA ACTGCTCAATATATTGTTATCAGGAATCACAAATGATTCTAAGGATCCTTCGGTTGATACCTTCAAGTCTACTGCTTTTC CCATATTAAAGCGCTTTGGAGTTCCCTCAGAAGGCTTGGATCTTAAAATAGAGAGTCGTGGAGTACCACCAAATGGTGGT GGCGAAGTTACTTTGTCGCTTCCTGTTGTTCAGAGTCTCATGGTAAGTTTTTGTATTTTTTCTCTTCAATTTAAATTTAT TTTGTTATCTTATGTGTTCTTCCTTGCAGGCAGTTAATTGGATTGATGAGGGGTTTGTTAAAAAGATTAGAGGAACTACG TTTTCAGTCAGAGTGTCTACTCAGTTTGAAAATAGCATGATTAAGGCTACCCGTGGAATTGTCAATCCCCTACTTTCTGA TGTGCACCTTTTTTCTGATCACAGATCAGGGCCACAGGCAGGAAAGTATGATTCCTTTCATTTGGTAGATTTTCTTGAAT ATTTAATTTGAGTTTCAGATATATATATTTGTTCGAAAAAAGAAAATCATATTGGATTAAAAATTTAAAACATAATTCCT TTTATTTAACCGGTTGTTTGCTTCCACAGCTCACCTGGATATGGAATTTCACTTGTTGCGGAGACTACTTCTGGGTGCTT CATCTCTGCAGATACTGCTGCTTCTCATGCTAGGGATGAAGATACTTCTAGCCTTGCAGATGATGTGAAAAGGGATCTGA TGCCCCCAGAAGATATTGGGAAGGAGATTGCTAATGCTTTACTAGGGGAGATAGCTCAATGTGGAGTTGTAGATTCAACA CATCAGGTTAGTATGTTAGAATTTTCAGCCCACTTTAATCCTCTTTACCAAATGATATATGCTGGTATTAAACAGATAGT AGTATGAAGGTGAATTCCTTATATATGATTCCAGTTGACAGGAACTAGTACTGAACAGATTGAATATAGATTATAGAGTG GTAAACTCCTTACAATAGAAAGAAAAAAAAACATGGTCTGGCCAGAGATCGCTCCTTTTTCTATACAATTTTCTGTACCT TCGTCTTCCCTCATCCCCTTTTCCCCCCTTGCACTATCCTCCCTTTTGTATGTCTCTAGAATTTTTTCCTCCTCTACTGG AATGCTACCTGTCCAGTTTGTTTCAGGAAACTCTGATTCATTCTCTTCAACAATCACTTCTTGTGGCATGTCACCCTTGG AAAAAAAAATCATGTTGTTACCCTCTGTCCTTTCTACCACATGCATTTTGGGCAATTCCCTCCTATTATGAAATTATTTT GGAGGCATGTCACAGAATTTTCTGATTTTGTGTCATCTTGAATTTTGTAATTTAGTGCCAACAACCAACATATGTTGTCT TTATCCACTAGGTAGGGTTATCTCCATGAATTAGTCTGCACCACGATGTTTTGTTATGCTGCATTAAGTTTACATAATAT AAAACCATTCATGTGTCTCTTACTCAACAGCTTAAGCTTTTGGAATAATTGGTTCTTGACATGGTATTAGAGCCTCTATG ACCAAGTGGTTTAGAGTTCATTCATTGTTATGTTGAAAAGTCACACATTGATTAGAGATATGGCCAAGATAGCCCTTATA TATGTGAAGGTTATCCTCACCTCTTGAGCTAGCTTTTGGGGTAGAGTTAGGCCTTCCAAATTCGAATCTGGTATCAGAGT CACACATTGATTAGAGATATGACCAAGATAGCCCTTATATATGTGAAGGTTATCCTCACCTCTTGAGCTAGCTTTTGGGG TAGAGTTAGGCCTTCCAAATTCGAATATGGTATCAGATCCTATCCTAGATCTGTTTAGTGGAGAGTGGAAACCACCTGTG TGTGGTCCATGATGTTCATTCTTGCATATTCCAAGTTCCAAATGTCCAGCCCTGAGCGTAAGGGTGTGTTTTGAGAAGTC CCATACTAGAGATATGTCCAGGATAGCCCTTACTCATTCATTTCTCTAATATTAGCCACCCCAACCTTTTCTCTAATGAT TCTATATCTAATTCTATCTTGTCTTGTGTAATTATTCATTCATTTTAACATTCTCTTCTCTACTACTCGAAGTTTACTTT CTTGCTGGTATTTTATCACCCAATATTATGACCCATAAAATATTGTAGGTATTCTAGTTGTGTAGTAAAGTTTTTTGTTT GAGTGGTACTTTTCTATCGCAAATCACACTAATGCATTCTTCCCCTTTATCTACCATTCTTGAATCCAATGGTTTATATC TCCTATGTTTCATTGTCATTTTATACAATGGACCCAAGATACTTGAAACGTGAAACTTTTGCATGTTATCCGATTTTCAT CTCTAAGATAGTTCTAGTGTGTTGATAATTACCGTTACTTAATATTTTTCCAGTTTCCACCAATCATCGTGCCAATAAAT AGCTTATAGCTTCCATTTTTAATCTTCATGGCATAAAACTGAATTGGTTCTCTTGAGATGTGGGTCTCTTGTTTAAATCT TATTCAGTTCATAGTATAACTCGGAAGTTCAATACTTCTATAATTTGCGCTATTTTGAATAGCCCTTTGGTCTGTAAGAT AGGGATTAAGTAGTCCTAGATCCGAATCTTTATTAAGGGCTTGTTTGATTGCAGTTTTAGTTTTCAGTTTTTAAAACAAT TTTCAGAAACAATTTTAAGAAGAAAACAGTTTGAATGACATGTTTTCCAACATTTAGAAAACTGATATCTGAAAACTAAA AACAGAAACTGAAAACATCTGATAGGAACCCAATTATTAGGAATAGGCCCAATACTACTAGAGTCCATGAAAGTAAGAGG AAGAGGTGCAATGCACCAAATCTTTTCCCTTGAGAGGAGTAACCGCTTGCTGAGGTGGCATGAGCTGTGCAGGTAGAGAG AGAGAGAGAGATTGGGGATTATATAAGCATGTATTGTGTGAGAGAGAAGGTAGGCTTGAATTGGGATTAGGCTTGGACTT GGGAGAGAATAGAGGCACTCTCTAATTTGCCTCTGCTATCTTTTCATTTTTCCTTTTCTCTGTAATCTTCTGCAGCACTG CTTCTGGGTTTCTACCAGAGGGTTCAGTGATATTATGCAATTCCACCTCTATTTTCTAGTTCTATTCCTAGTGTCTAACA TTGTTTCTACATTTCCTTGCTGAAAAACCGGGTTTCTAACATTGGTATCAGAGTACAATGACTAAGAGTGAAAATAGGAT AGATGAACACTGAATCCTCTGGAAAATACCCAGAAGCAGTGTTTTAGGGAATTACAAATAACAGTAGAAAATTAAAGATA AGAAACTGAGGCAATTCGAGAGTGCCTCTACTCTCCCAAGCCTAATCCCAAATCAAGCCTACCTTCTCTCTCACACAATA CATGCTTATATAATCCCCAATCTCTCTCTCTCTCTCTCTACCTGCACAGCTCATGCCACCTCAGCAAGCGGTTACTCCTC TCAAGGGAAAAGATTTGGTGCATTGCACCTCTTCCTCTTACTTTCATGGACTCTAGTAGTATTGGGCCTATTCCTAATAA TTGGGTTCCTATCATCACTCCCCCCCTCCAAACATCCTTGTCCTCAAGGATGGATGTGGAAAATCCTTCTTGAATGTATG TTGCTGCCCCCAAAGTGACCTGTAACAGCCTCCCTTTGATCCACTTCCCTGCAGAATATGGGTATGGACTATAGAATCCA CCACCTGGATCCCATTGTTGAAAAGATGTGGGCCAAGTTGTTGCTGAAAAATCAGAACAGCCCCTTGAATTCCAATGTAA AACAAGACAAGCTTCGGGCATATGCGAGATCATAATTTCCCTTTGACTCAACCGCTAAATCATCTTGGTCCAGCAGATTT TGCCATGTAATCAATCCGTGTAATGCAACCAGAGAACCTAGAATTGCTGTCATCGCTTGTGCAGTCTGTATTGACAGTTC ATTCTCTGCTAAGAACATAAGCAAAAGAGGTTGATTTTGCTGTGGAGTTGCCAAAGTCTTCTTCAGCTCATACTCCTCCA TTCCCATGCTCAATATCTCCTTGAAATTCCCATGAGAACCAACATTGAATGCCTGATAGGGTTCCTCAGCTAGTAACCTT GATTTATGAAGCTGTGACAGAGAATTTAGCCAATTTCCAGTCAGCAATTCCAGTGGTCTTTGCAGCTGATATGCTTGAGC ACTTAGTTGATCTAGTGCCCTCAGAATAGTACTCAACATTTCAGGTACTAGCTCTTCTTCTAACCATGATACAAGAAGCA AGCAGCAGTATTCCCCATTATCAAACATATAATGAGCCCACAAATCCTTAACTCGACCAGTAGTAGAGTCACCATGAAAA ATCAGCCCTCTACTTCCATGCGAACAAAAGTGAAAAGAACTCAAAGTACTCCCAAAAGGTTGATGCCGCGCAATATGTTC TTGTCTTCCCCTTATTTTGTTGAACTCAGTAACTTGTGAACCCCGGTTTTGAAATTCAAATTCTAATCCGGTAGAGACAA TGAGCCAACATGAGGCAACACTTGTTGACCCAATTGTTGCTGAGAAGTAAGAACAACCTCCAGGATCCCAATGTGTAAAG CTCAAGGCAAATGAGAAAACACAACTTCCCTTAGAGCCAACATCAGCATTTAAATTCTGATTAGATGTCTTATCTAATGA CCCTAATTCATGAGGTTGTAGCTTCAAATTCTCCCAATAATTGACTATCACTTGGCAATGCTTCCAATTCTGTTCAAGTC CCCCCCTCAGTCTATGTAACTCAGTACAACTATAGCTTGGTTTTCCTTGCCATAGGCATGACCCCACCATGGTATCAAAA GTTTTGGGTGAGTGTTGGATTTTCTGCATGTTTGCAATTGCTAATGAAGATGAAACACGGGTACCAGCAAATGTCTGAAT ATCAATTCTACTCTTCACTCCGATGTTCTCTCTGCCCCTGGGAGTGTCTTTACTTGGAATAACTTCTCTCACCCCATCCA TATGCAATTCAGGCCTGGGTAGTTCTAGCTGACTCACATACACTGGAGAAATAGGAGAAGGGAGAATGATTGATGCTCTA GGGTGAAGAACGTAAGCTTCCCCCTGTTCTCCATCTACAGCGTTCCCAACTTGAGCCAATATAATTTCAGAATTTATTTT ACTGAAAGGCTTGTTTTGTATACTTACTGTTGGGCCATGGTACCTTGTGTCAAACACTGGGCCCAAGTTATTTAAATAAC ACTCTATTCTGCCCTGAGCACTTTGAGGTTTTTGAAACAATTTTTGTATTACAACACAACTACTAACCTGTTGGGCCAAG CCCATTAGGTCAAAAGTGGAGCTCAAATGTTGAAATTCCAGTTTTACCCTTTCCTGGGTTTTGATTCCCAAAACGCAATC CTTTTTCGCGTTTGATGCTACCTCTTCCAAGGTCGCATCTATTTGCTTCTCCTCAGCCACTGCTAGTGAAACCCAGTTTG GCGGCTTGGGTGGTGGTCGCCGATTAGCCATGGTGGTGAACCTTGCCGGAGCTGAACCGCGATCTTGACGTTCCGTAACC TTGGTCAGATTCCCCACCGCGTGAACCCCTGCTACTAAAACCAGATCCGTTGGTTTAGGTGGTGGTTGCTGCTCGTTCCT TTTTGCTCCAGCTTCTTCCTCCGGCGTAGTTACGATGATCTCCGTCGGAATCGCCTCACTTCTCTTGTTCTTTGAAATTC CGTCATCTTCGAGCCGTTCATCTTCACTGCTATGAAACTGGACCCATTCTTCACACCAATTTCTTCTCAGTTCCAGGTTG GTGGCTTTGGCTATTCTGGCTTCATCCCTCTGAGTTTCTTCCTCCCCTGTATCTTGAACTGGATCTGGTAGGAACGAATC AGAATCTGGTTCGAATTTTCTTAGTAATGCTGTCACAAAATCCATCCATGTTGCCCTCTGATTTCTTCTTTTCCAGTCAT ACCACCAAATCAGCGCATCATGTGTCAACGCCTTCTCTGCCTCTGAGAATTTCTTTTCTTCAGATACTCCTTTGGCCTCA CAGTGTTGCTCCACTGTGATGATCCATCCATAAGCCCATCTCCCATCAAACTCTGGAAACATCTTCATGAATCAATGGCT ACCACAGCACCTAGATCGGTGCTCTGATACCAATGTTAGGAACCAGAAAATAGTACAATGACTAAGAGTGAAAATAGGAT AGATGAACACTGAATCCTCTGGAAAATACCCAGAAGCAGTGTTTTAGGGAATTACAAATAACAGTAGAAAATTAAAGATA AGAAACTGAGGCAATTCGAGAGTGCCTCTACTCTCCCAAGCCTAATCCCAAATCAAGCCTACCTTCTCTCTCACACAATA CATGCTTATATAATCCCCAATCTCTCTCTCTCTCTCTACCTGCACAGCTCATGCCACCTCAGCAAGCGGTTACTCCTCTC AAGGGAAAAGATTTGGTGCATTGCACCTCTTCCTCTTACTTTCATGGACTCTAGTAGTATTGGGCCTATTCCTAATAATT GGGTTCCTATCAACATCTTTTAGTTGTTTTTGTTTTTAGTTTTAGAAACTGAAAATGAGAACTGTTTTCAAAAACTCCAG ATCGTATTTGAAATCTGTTTTGAAAACTGCAAATAAGCATGCCCTAAGTCCCTAACTACTCCTCCATTCCTTCAACATGC TCTTGGATCTCAATCTCGTTTTGTGAGGCATGCGTCATCTCATGCGTTTCTCTTTTCACACTTTTAATATCTCTATCGGT ATATTATCTTGTCTAACTGCCTTATCCTTACACGTACTCTTCAATTCCTTCTTTCACTTCAAAGTCTCGAGTTCATGGAT AGTAAGTGTAATTTTGGTCATCCTCACTAGTGTTAAGTGTATCAGAGTTTAAAGAATACTTGTGTCCTTCACTCAAAAAA ACGCATCAAAATAGCTCTTGACCTTTTCTTGATATCTTGTTATGAGACTAATGCTTTTCCTTCATCATACTTGATGCACA TCACTTGGTTCAGGTCTCTATTATTTCTCTCTATTTTTAACAAGCCAGTAGATAATATACTACTTTGCAGTTTGGTGCTT AAAGATTTATGTAAACCATCAAAACTATCTTGCTCTAGCTTGGCTTACCATCTTATTGTTTTTCTTAACTATCCTATTTA TTCAAGTTCGTTTTTATAATTCCCTTCTGACCTAATATTTTGTTGCACACTCTTCTCCCACCACCAAGAATCTTTACCTT TTGGCTCAAAACCGGTTAATTTTTCTAGTAACTCTTATGCTACCCTTCTAATCCGTTTAGTCATCTTGTTCCACGTGTCA TAAACATTTTTGTCTCCCAAAATCCTTGCTCCAAAATCTCTCTCAAAGAGCCTTTATTTTTACCCTTTAGTTTCCTCCAT TTTATCTCAAAGAGGCTTGACTATTCCTATTTATTCTCTACATGCAAATGCTAAACAAAAACCCTATGTTGGAAACTCTA ATTCGCATGATATGACTTTGTAGCTTGTGCTAAGTTTTCTATCTTATTTCCTTGATAGAATGAAATCAGTTTGGGAGCAT ATCACCTCCTTCTTGTAGTTTGTAATTTGTTCGTCGTAGTAGAGGTATAAGTAATATTCTTCAGTTCTGAAATAAGTTGA CGACAATTTCATTTTCTCACTTCTGGGTTTGAAGGAGCTGTGAATATGATGAAATTTGCCTCCATTGTCCAAAACTGAGG GCTTCCCCTAATATTAGTTTTTCAACATTTATTGTTTCCAGGGTTTGCTATTTCTTCTTTGTGCTCTATGTCCTCAAGAT GTTTCCAAGGTTCGTGTTGGAAAACTTTCCCAGCATGGGATTGAGACACTGAGAAACATAAGGGACTTTCTCAATTTGAA GTTTATTATCCAACCAGATCCAAATACACAATCAGTGTTTCTCAAGTGTGTTGGTTATGGCATGAAGAACCTTTTCAGGA AGGTCTCATAA
CDS sequence (LotjaGi2g1v0126600.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGAAGATGGCTTACAAGAGGTTGAAGGGAAGCCAGAGCTTCCGGCAACGGTTGCTTCTCGCCACTCTTTCCTCCAC TCCCATTCTCATTGAGGACATACGCGCTGATGAGACGTGGCCTGGTCTTCACAGCCACGAGATTTCGCTCCTCCGGTTGT TTGAGATGGTTTGCGATGATTGTCATGTTGAAATCAATGAAACTGGTACTAAATTGAAGTACAAGCCGGGAACTATTATG GGTGGCAAACAATATCATGCCCACGAGTGTGGTCTCTCAAGATCCATTGGTTATTTCCTAGAGCCACTCATTGTGCTAGG TTTATTTGCAAAGGAACCCCTCACCATCAAGCTCAAAGGAATCACAAATGATTCTAAGGATCCTTCGGTTGATACCTTCA AGTCTACTGCTTTTCCCATATTAAAGCGCTTTGGAGTTCCCTCAGAAGGCTTGGATCTTAAAATAGAGAGTCGTGGAGTA CCACCAAATGGTGGTGGCGAAGTTACTTTGTCGCTTCCTGTTGTTCAGAGTCTCATGGCAGTTAATTGGATTGATGAGGG GTTTGTTAAAAAGATTAGAGGAACTACGTTTTCAGTCAGAGTGTCTACTCAGTTTGAAAATAGCATGATTAAGGCTACCC GTGGAATTGTCAATCCCCTACTTTCTGATGTGCACCTTTTTTCTGATCACAGATCAGGGCCACAGGCAGGAAACTCACCT GGATATGGAATTTCACTTGTTGCGGAGACTACTTCTGGGTGCTTCATCTCTGCAGATACTGCTGCTTCTCATGCTAGGGA TGAAGATACTTCTAGCCTTGCAGATGATGTGAAAAGGGATCTGATGCCCCCAGAAGATATTGGGAAGGAGATTGCTAATG CTTTACTAGGGGAGATAGCTCAATGTGGAGTTGTAGATTCAACACATCAGGGTTTGCTATTTCTTCTTTGTGCTCTATGT CCTCAAGATGTTTCCAAGGTTCGTGTTGGAAAACTTTCCCAGCATGGGATTGAGACACTGAGAAACATAAGGGACTTTCT CAATTTGAAGTTTATTATCCAACCAGATCCAAATACACAATCAGTGTTTCTCAAGTGTGTTGGTTATGGCATGAAGAACC TTTTCAGGAAGGTCTCATAA
Protein sequence (LotjaGi2g1v0126600.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGKMAYKRLKGSQSFRQRLLLATLSSTPILIEDIRADETWPGLHSHEISLLRLFEMVCDDCHVEINETGTKLKYKPGTIM GGKQYHAHECGLSRSIGYFLEPLIVLGLFAKEPLTIKLKGITNDSKDPSVDTFKSTAFPILKRFGVPSEGLDLKIESRGV PPNGGGEVTLSLPVVQSLMAVNWIDEGFVKKIRGTTFSVRVSTQFENSMIKATRGIVNPLLSDVHLFSDHRSGPQAGNSP GYGISLVAETTSGCFISADTAASHARDEDTSSLADDVKRDLMPPEDIGKEIANALLGEIAQCGVVDSTHQGLLFLLCALC PQDVSKVRVGKLSQHGIETLRNIRDFLNLKFIIQPDPNTQSVFLKCVGYGMKNLFRKVS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 18 | 18 | - | – | |
| Phobius | 1 | 36 | 36 | - | – | |
| PANTHER | 1 | 379 | 379 | 2.5E-171 | ||
| PANTHER | 1 | 379 | 379 | 2.5E-171 | ||
| CDD | 6 | 355 | 350 | 1.23222E-153 | ||
| TIGRFAM | 8 | 378 | 371 | 7.5E-138 | ||
| Pfam | 9 | 352 | 344 | 7.6E-56 | ||
| Gene3D | 10 | 351 | 342 | 7.7E-126 | ||
| SUPERFAMILY | 11 | 235 | 225 | 5.82E-55 | ||
| Phobius | 19 | 31 | 13 | - | – | |
| Phobius | 32 | 36 | 5 | - | – | |
| Phobius | 37 | 379 | 343 | - | – | |
| ProSitePatterns | 158 | 168 | 11 | - | ||
| Pfam | 185 | 300 | 116 | 1.3E-29 | ||
| Gene3D | 185 | 296 | 112 | 7.7E-126 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Cellular component | Nucleolus | A small, dense body one or more of which are present in the nucleus of eukaryotic cells. It is rich in RNA and protein, is not bounded by a limiting membrane, and is not seen during mitosis. Its prime function is the transcription of the nucleolar DNA into 45S ribosomal-precursor RNA, the processing of this RNA into 5.8S, 18S, and 28S components of ribosomal RNA, and the association of these components with 5S RNA and proteins synthesized outside the nucleolus. This association results in the formation of ribonucleoprotein precursors; these pass into the cytoplasm and mature into the 40S and 60S subunits of the ribosome. | ||
| Biological process | RNA processing | Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules. | ||
| Biological process | Ribosome biogenesis | A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits; includes transport to the sites of protein synthesis. |
Expression pattern of LotjaGi2g1v0126600.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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