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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0146500 |
| Transcript ID | LotjaGi2g1v0146500.4 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat-containing protein, putative; TAIR: AT5G07270.1 hypothetical protein; Swiss-Prot: sp|Q4FE45|XB33_ARATH E3 ubiquitin-protein ligase XBAT33; TrEMBL-Plants: tr|I1L3B1|I1L3B1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0146500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:52724204..52731073) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGAAATTCATTTGGGTGCTCAGCTTCCGGCGAGAGGCTGGTGTCGGCGGCGAGGGACGGCGATTTGGTGGAGGCCAA GATGCTTTTGGAATGCAACCCTGGTCTTGCCAAGTACTCAACCTTTGGTGGCCTCAATTCCCCTCTTCATTTTGCAGCTT CCAAGGGCCATAACGAGGTTTCTCATCTACCCTTTTTCAGTTTTGCCCTTTAATGTTTCAAAGTTTGTGTTTTTGCCATT TTCATCAACACCCTTTTCTCAATGTTTCATTTTTTCAAATTAGATTGTGGCGCTGTTACTTGAGAATGGAGCTGATGTGA ATTCAAGAAATTATTGTGGGCAGGTAGGTACAGTTTTCATTTTGGTGTTTATTTTTAAACATATATCAGGTTGATTGATT TAAGTTTTATGGATATTGTTTTTGATTTGTCGAATTTGCTTGATATTGTTGCAATTGGTGTTGTTGGAAGATTCCATCCT GTGTTAGAAATTGCAAATTGAGTTTTCCCATTTTGGTTCAGCTACCTACCTAGTTTTGAAGTATGATCCTATTCCATGTT GTGTAGTATGATTATTGACAGATCAGTGGATCCGGTGCCTATTCAATAGATGATATATCTAGTGCTTTCCTTTTCGATTC ACTTATATGGTGCACTGACTAAGAATATGGTTTGCTAAATGATGATTTTTGGTTACTGTGATCCTTGATTTGTAGACGGC TTTGATGCAAGCTTGCAGATATGGTCATTGGGAAGTTGTACAGACCCTTCTGCTCTTTAGATGCAATGTGAGTACGGTTA TAACTGATGCTGAACTGTCTTTCTCTATTACATAGTGTTTACTGTCCTATAGTGAGTTAGAGACCACAGGTCACAGGCCT GGTACTTGAAACTATGTGCTGGGTGGGAATTGGATTGTTGGTCTTCTTCTAGTGTATTTTCCTATTACATGGTTAAAGTT TCTTTTCAACAATAACTAGACCCTATTCAATTTAATAACAGGTTATGAAAGCAGATTATCTCAGCGGAAGGACAGCTCTT CATTTTGCAGCTGTCAATGGGCATGTAAGATGCATTAGACTTGTTGTGGCTGACTTTGTTCCAAGTGCGCCTTTTGAAGC TTTACACTCTCGCACGGATCCTAACATGAGCAGACATGAGCATGGGTGCGCCTTTCCTTTTCATTATATAATTCCCAAAC AATGTATTATTGTAAATTTCATGTATTTTTACTTTTATTTGATAATGTTGAATGACTAATATACTTTCGCCATCTGTTAC GTGCTTATATTATAATGTTTTTTGTATTTATTTCATCATGTATTTAGTATTTCATAGACTCACTTTATTTTTTCTGCATT TTCATAAACATACAGTTGTGATTTTTATTACTAAATTCATGGTTAATTTTTTGTGGGTAGTAGGACTGATAGGAGTTAGG CCTCTTAAGAAGAGGTTGTTATTGTAAGTAACTAGCCAATAGTTGTTATGGTTAGCTAGTTAATGAGTTAGATAGACTGT TACAGTGAGGAGATATTATAAATAAGAGGGAGAGAGAAATAGGAGGGTATCAAAATTGTAATCAGGGAAATTAGGGAGAG CCCTGGTCTCTCAAATAGCAGGGAATTGGTGTATCTCTTGTTGTTCATTGCTGGTACCTATCAATGACAATAAATTTCAT TCAGTTTTTTTTTGTATTTTTTTTATATTAAGAATATTTAAGGCCTGACTGTACAATGATGTGTAATTTCTATATGTTAT ATTCTTGCTATTTATTTACTTTATTCCAGTGCAGTGCCCTGTCCAAGTTTGTAAATAAAACAGCTGATGCTGGTATTACT GCTCTTCATATGGCTGCACTAAATGGGTATTTTGATTGCGTACAACTCCTACTTGATCTTAATGCAAATGTGTCAGCTGC AACATATCATTATGGAACTTCGATGGATTTAATAGGTTATTATTTTGTTTAATATGCTACTACATCTATGGTTTTCTCTT TGCCCCTTGAAAATTACTGATAAGCATCAGTGCATGTAGGGGCTGGAAGCACTCCATTGCACTATGCTGCTTGTGGGGGG AATTTGAAATGCTGTCAGGCAAGAATTTCCTTAACTTTGAATCTTTGATGTGTGATAAATGATAATCCATCTGGTCAGCT GGTCTATTTCTTTGAATCTGTCAATGATGGTCATATTTTTCCAGATCCTCCTTTCAAGAGGTGCGAGTCGGATGGCTTTG AATTGCAATGGGTAAGATATTGTAAAATGGAAATTCTGGTGCTAAGTTTTGCTTGCCCCATAACATGAATTATACAAATT TGAATTTTCCCCCAGGTGGCTTTCACTTGATGTTGCTAGGATGTGGGGGCGTCATTGGCTTGAACCGTTGCTGTCACCCA CTTCTGATGTCATAATATCATCATTCCCTGCTTCAAATTATTTGTCCTTGCCTCTCATGAGTGTGCTCAACATAGCCAGG TATTTTTACAGTAAATATATCTTGATAATGAAAATGACAAAAGTAAAGGGAACAGTTGTGGAACTGGAAATAGTCTAGGG ACCAAAATTAGCATACAATAATGATAACAGCAAAATCTTCTCCTACTAGGTGAAGTCTAAAACATGGATCACATGATGCT ATAATACCTTGTCTAAGTTAAAAGATAGACCATTTACCTCAAATATCTCTTAATGATTTTGCCTTAAGTTTTCCTTGGTC TCACTATGTCTTTAATTATTTGATAATTCTCCGTCTCCTCCATCTAGTCAACTCTTCCTATGGATGCCTCTATGCTGATG CGACTGTATTGAGAATTAGTGGTTAGTTCAGTTGAATTAGTGGGTTAGTTCAGTTAGGAGTTAGTTGAGTTTGGCGGGAT TGGCTATATAAGCCATTGTGTGACCCTATAGTTGTAATGTTGAATGTTATGAGTTCTCTCTTCCCCTGTTTCTCTCTTCT CTCTCTCTATATCCTCTTCTCCCCCTTTCTCTCTTATTCCTATATCTGATCCTATCATATGCTCTTCTCCACATATGCCC AAAGTCCAAACCACCTAAGGTGAGACTCTACTGCATATGCCCAAAAAACCTATAGAGGCTATCTCAACTTTCACTCAAAT GATTGTGTTTGTATTCCTAATTCTATCTAATCTCTTGTAACTACTCATCATTCATCACTAAGTTTAACTTCTTGTTGGCT CTTAAACACTCGACATTGGTGTTATACAACATTGCAAATCTCATTATAGCTATGTGTAAAATTTTCCTATAGCTTGAGTG ATACTTTCTATTGCAGGTCACGCTTGAATCTTGATCCATTTCATCCACATTGCTTGAATCTCATTATTGATATTTCCCTT TATCTCCCTGTCATTATGTATGTTAGACCAAAGTACTTAAAAATGTGAGATTTGTGGTATTCTCTTATTTTTACCTCTAC TCTTATGATTTGGTTGTCTCATGCTAAACTTGCATTCCATATACTCTATTTTACTTTTATTCAGACAAAAGCCATGTGTT TTCAAGGCTTGTCTTCATATCTCTAACTTCTATTTATTTTCTCCCCTCTCAAACTAAGACTACATTGTTTGGAAAAAGCA TGTACCATGCCACCATCTCTTAGCCTTATATCATAATCATGTCTAGAACCAAGATAAAAAGATAAGGGCTCAGTGTTGAC CCTTGTTGCACACCTAGTTACAAGAAAATATTTTGTATTCTCACCTTACATTCTCCCACTAGTCATTGCTCCTCATACAT GTCTTTGATTGCTTGAACATAAGCAATCAACCTCGTTTCTTTATAGTCTTCGAAAAAAAATTGTTGAGTGCTTAATCGTG TCTTTTTCAATTCAATAGGTGTAGGTCTATTTGATTCCTCCAATGTCTCTCCATCAGTCTTCACAGAAAATATATGGCTT CCGGGGTGGGTCTCCCTGATATATAAAACCAAATTGATTTTTATAATATGGGACAACCGTCTTAATCTATGCTCAATGAC TCTCCCAACCCTCTATAATTTACAGACATTTATATGTTAGTTTTGTTATTGAAGATAGAGATTAAGTTAAACAGCAAAAT AATTATGGGAATATAGGGTGCTCTACACCCTCTGTTAATAAATAAAAGGAAGGAAAATGGTAAGGATGCCTGAAATTGCG AACCATCAGTGTGGAAACTTAATTTTCTCCTTACAAGAAAGACTCAATAATGGACCTTGTCCAATTTCCAGATATGCAAA ATGGATGTTATTACTTCAGACTTTTACTATTTGTCCTTCATGATAAATAAATATCTACATTAATTCTTCTGATTAGTGCA TGTCTAATGTGATGTCAACAAGTAACTGTTGCAAATTGGGAGGTCCTTTAGATTCTTGGCTTATTAAAAATATCAAACAA GTGGTCACTAGAATGATTAATGTTGCTGTGTATCTGATGAAGTATTTTATGATGTAAAATACCCTAAGAATTAAAATTGA TTCTCCTTTCCACTCAAAATCAACTGGGTATTTAGTTTTTGACCTGTGGCGTAAGTGGTATTCTTCTCGATTCACATTGC CTACTTGGGTCCCGTCATTCTTTGGATTCGGATGCCGACTATTCTGGATTCGGGACTTAGTCATAAGGCTCTTCATCCCT CCACCGAGTGATCAGATTCGAGAGCTCTTCCCACACACTCAGCCTAGGTTGCTAACTACCCCTCGTGGGTAAATCCTTTT TATTTTAGTTGTGCATAAATAGAAAATCACTCTAATTTGGTTGGTCTTGAGTGGGTTCTAGTTTTAATTTTTTGGAATGT CATTTTTGTCTCATTATTTCAGTCATTGAACCTCAGTAATCACTCTAAAGTAAATTGATTATCCCTCACCTTGCTTTATC ATATGATATACTATAACTTTGTAGATGACTTTTAATTTGAAATCAAAATATGTTCTTTTTTGGTACTTATTTCTTTTAAT GGCATCTATTATCCAAAAAGTTTTAATATTTTAAGGTTGGTGTTTCTTGCTTGTCAATTCCTGTGTTCTGTGTCATCCCA TGCTTTCCATCTCAAATTTTGTCCGCAAAACAGTAAAATAATAGAATAGGCTTTCCTTTCTTCTATATTTCCATGATGAT CTAATGGTAGTAATAATAACTATTAGGACCATTATCCTTTCTGATCCATTCCTGAGGATTCTCACTTCTTTTAATCTAAG GTTCCAGCTATGTTAATCTATCACATTATGACACATTTTGGCTGTGAATTGGAAAACAGTTGCACAGCTCTTATGATCTG ATTATTCAAGTACTTACTGAAGTGAATGTATGAAGATCTGCATCTTTGCTTTTCTATTGTCTATAATACAAGTTATCTTA TTAAATGGTGATTGACTAGAGCTGAGAACAGGGATTAGTCATTTTTGTGCTATATGTAGGCTGAGACATATGCAGACAAT GCGCTTTCCACAAGTTATTCATGATATAGGGCCAGTGAGAAAAACTATATGCAATATGGACTATTTCTTTTAGATTAGGA GCACGGCCAAAATGATCCCACTGTGGGCCCTCCCCTTGTTTTGATTAGAATGAAATGTTCCTATCATATGACTCTTAAGA TATGTAATACTACCAAAATAGTGAAGTTCTCACTTACCAATACACTGAAAAAGGAGAAAGAGAATTTCGTTGTTTTGGTT GTTTTCCATTTCCTTATGTACCTAGCTAGAGTTAAGATTTGATATCTTTTGTTTACTCCTAACACAAATATAATTAAAGA TTGATTTGAATAATTGCAGAGAGTGTGGATTGCAATCATCTACAACCTCCTCTAATGAGATTGACTTTTGTGCTGTCTGT CTGGAGAGGCCATGTTCTGTGGCTGCAGAAGGTACTGGATTCTATCTTTTGAATTTTGGTTAATGTTCGCCTGCCTGTCT GCATGAGGATATCTAATGAACCACAATTGCTTTCTGAATTAATGAAGCAAAGCAATATGTGATTTCTTGAGCCAAGAAAA TCAGTTATATGTAGTCATTTCCTTAGTTAAATAATCCCAAGATTTCAGAAAGGGTGGAGGTTGTCCCTTTCTCATTCTCT TTGACACTATATTTGCAACTTTTGATTTTTATGAGAACTGAAATCAATACATACTAAGTGTTTTTAGGGATACTAGTTGA GTGCAACGTGAACCGACTCTTATCCCAATCCACAAGAAGAGTTCTGTCACTTTTTGTCTCGAAGTGAATGCTAACATCCG TTTGCACCGGTGCCAACGAGTATCCAAACGTAGTATACTTTGTGGATGCTTTTTTTTTATGTTTACTGTAATTGATCTAA AAGAAATTTACATGCAGGATGTGGGCACGAGCTTTGTGTAAGATGTGCGCTCTATCTTTGCTCAACAGCCAATGTTTCTT CAGAAATGCAGGGCCCTCCCGGCTCTATCCCTTGTCCCCTTTGTAGGCATGGAATAATCTCTTTTGTCAAGTTACCAGGT TCCCAAGCAAAAGAAAATAAGTTACATGCGTCTCTCAGCCTGTGCACCCCATGCATACAACATCCACGACGCGACCTAGA TCCACAATCTCATACACCAGAGATTCGAAGAAACCGTGTAGCTTCTGTTTCTTCTGAGATGCTTTGCCCTGTCACCTGTA CTCCATTTCCATCTGTAGCAATTCCTCTATGCACCTGCAATGATGGTCCTTGTCCGTCGTGCGAACCCCGAGACATAGAA ACACAAGACGAGTCGCCTCGTCATTCGCAAGAAACAGATCAGGACAAAATGGAAGGGACAAGGCTGGGGAAAACAACTTG TTCAAACATGTTTTGGGGTAGAAGAAGTTGCAGCAGGGAGCACCAGTGCAATTCAGAAATAAATGCCTGA
CDS sequence (LotjaGi2g1v0146500.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGCATGGTATTTACTTTATTCCAGTGCAGTGCCCTGTCCAAGTTTGTAAATAAAACAGCTGATGCTGGTATTACTGC TCTTCATATGGCTGCACTAAATGGGTATTTTGATTGCGTACAACTCCTACTTGATCTTAATGCAAATGTGTCAGCTGCAA CATATCATTATGGAACTTCGATGGATTTAATAGGGGCTGGAAGCACTCCATTGCACTATGCTGCTTGTGGGGGGAATTTG AAATGCTGTCAGATCCTCCTTTCAAGAGGTGCGAGTCGGATGGCTTTGAATTGCAATGGGTGGCTTTCACTTGATGTTGC TAGGATGTGGGGGCGTCATTGGCTTGAACCGTTGCTGTCACCCACTTCTGATGTCATAATATCATCATTCCCTGCTTCAA ATTATTTGTCCTTGCCTCTCATGAGTGTGCTCAACATAGCCAGAGAGTGTGGATTGCAATCATCTACAACCTCCTCTAAT GAGATTGACTTTTGTGCTGTCTGTCTGGAGAGGCCATGTTCTGTGGCTGCAGAAGGATGTGGGCACGAGCTTTGTGTAAG ATGTGCGCTCTATCTTTGCTCAACAGCCAATGTTTCTTCAGAAATGCAGGGCCCTCCCGGCTCTATCCCTTGTCCCCTTT GTAGGCATGGAATAATCTCTTTTGTCAAGTTACCAGGTTCCCAAGCAAAAGAAAATAAGTTACATGCGTCTCTCAGCCTG TGCACCCCATGCATACAACATCCACGACGCGACCTAGATCCACAATCTCATACACCAGAGATTCGAAGAAACCGTGTAGC TTCTGTTTCTTCTGAGATGCTTTGCCCTGTCACCTGTACTCCATTTCCATCTGTAGCAATTCCTCTATGCACCTGCAATG ATGGTCCTTGTCCGTCGTGCGAACCCCGAGACATAGAAACACAAGACGAGTCGCCTCGTCATTCGCAAGAAACAGATCAG GACAAAATGGAAGGGACAAGGCTGGGGAAAACAACTTGTTCAAACATGTTTTGGGGTAGAAGAAGTTGCAGCAGGGAGCA CCAGTGCAATTCAGAAATAAATGCCTGA
Protein sequence (LotjaGi2g1v0146500.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSMVFTLFQCSALSKFVNKTADAGITALHMAALNGYFDCVQLLLDLNANVSAATYHYGTSMDLIGAGSTPLHYAACGGNL KCCQILLSRGASRMALNCNGWLSLDVARMWGRHWLEPLLSPTSDVIISSFPASNYLSLPLMSVLNIARECGLQSSTTSSN EIDFCAVCLERPCSVAAEGCGHELCVRCALYLCSTANVSSEMQGPPGSIPCPLCRHGIISFVKLPGSQAKENKLHASLSL CTPCIQHPRRDLDPQSHTPEIRRNRVASVSSEMLCPVTCTPFPSVAIPLCTCNDGPCPSCEPRDIETQDESPRHSQETDQ DKMEGTRLGKTTCSNMFWGRRSCSREHQCNSEINA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 23 | 23 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 21 | 21 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| Gene3D | 2 | 64 | 63 | 2.0E-10 | ||
| Phobius | 4 | 14 | 11 | - | – | |
| PANTHER | 8 | 355 | 348 | 7.5E-194 | – | |
| PANTHER | 8 | 355 | 348 | 7.5E-194 | – | |
| Pfam | 15 | 44 | 30 | 3.7E-5 | – | |
| Phobius | 15 | 23 | 9 | - | – | |
| SUPERFAMILY | 17 | 119 | 103 | 2.02E-21 | ||
| ProSiteProfiles | 23 | 107 | 85 | 19.545 | ||
| ProSiteProfiles | 23 | 55 | 33 | 11.942 | ||
| SMART | 23 | 52 | 30 | 5.6E-5 | ||
| Phobius | 24 | 355 | 332 | - | – | |
| Gene3D | 65 | 121 | 57 | 7.2E-10 | ||
| SMART | 66 | 95 | 30 | 2.2E-4 | ||
| ProSiteProfiles | 66 | 98 | 33 | 11.114 | ||
| Pfam | 67 | 97 | 31 | 1.1E-5 | ||
| Gene3D | 148 | 234 | 87 | 2.9E-7 | ||
| SUPERFAMILY | 164 | 221 | 58 | 6.71E-8 | – | |
| SMART | 165 | 214 | 50 | 0.0077 | ||
| ProSiteProfiles | 165 | 215 | 51 | 9.657 | ||
| ProSitePatterns | 180 | 189 | 10 | - | ||
| MobiDBLite | 303 | 327 | 25 | - | – | |
| MobiDBLite | 303 | 326 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0146500.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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