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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0180600 |
| Transcript ID | LotjaGi2g1v0180600.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT5G17680.1 disease resistance protein (TIR-NBS-LRR class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|I1N650|I1N650_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0180600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:60265990..60271106) extracted from Lotus japonicus Gifu genome v1.2.
AGCCTATATATGGTTTAGTACAAAGCGTGTGTGAAGAGAACAAATTTCCTGTGAGTTTCTACAATAACTGACAGTTTTTT GTCAATAAGTCAGCAAATTTATTACCATATACCAGTGAATACAATGAATCACACTGTTACACGAAACAGACAAGACACAG GAAAATGTATAGAAATTTCGGGCTCCTGCAAGGCTGCAACACGTTGAGAACATAACATTCATTCTCTTTTTATATGGCAA TCAGGTTCGTGCTCACTCATACACACCATTCATATTCCACACTTATCATTCCAAGCCTTCTTTTCTCATGGCTTTCCTAC CATCATCATCCTCCTCTTCCATCACCTATGCATTCACCTACGATGTGTTCATCAGCTTCAAGGGTTCTGATACCCGCTAT GACTTTACCGGCAATCTCTACAAAGCTCTCTATGGTAAGGGAATTCACACTTTTATTGATGACAAGGAGCTTCACAAAGG GGACGAAATCACACCATCACTTGAGAAGGCCATTCAAAACTCCAGGATTTTCATTGTTGTCCTCTCTAAGGACTATGCGT GCTCCTCATTTTGCTTAGATGAACTTTCCAAGATTCTTGACTGCTCTCAGGAAGAGGGTCGTCTTGTTTGGCCAGTTTTT TATGGTGTGGATCCTTCTGATGTGCGAAAGCAAATTGGGACGTTCGGAGAAGCAATGGCCCTGCATACAGAGAGGTTCAA AGATAACAAGGACAAGTTGCAAAAATGGAGGATAGCTCTACAACAAGTAGCTGATTTGTCAGGCTGGCATTTCAAACATG GGTGTGTTTCTTATACTGATTTCCTTGCGTTTTAGATATTGTCTAATTATTACAAAAATTTAGTTATAGTGAATAAGTAA TAAAAAAAGGAACATGATGCACTATTATGACTTTACACAAACTTCACTTCTCTTATTGGACAGAGATGGATATGAACACG AGTTTATCGGAAAGATCATTAATGAAGTTTCAAGAAAGATGAATCGTGTTGCTTTACCTATTGTTGATTACCCGATTGGA CTAGAGTCACAAGTGCGACAAGTAGTTTCGCTTTTGGATGTTGGGTCTATTAATAGAGTTCACATGGTAGGGATCCATGG AATAGGGGGAATTGGTAAAACGACACTTGCTCTAGCAGTTTACAATTCCATTGCTGACCATTTTGAAGGTTTATGTTTTT TGGAGAATGTTAGAGAAAATTCAAACAAACATGGGTTACTACATCTCCAAAAGACCCTTCTTTTGGCTTTCCTTGGAGAG AAGGAAATTGAGATAACAAGTGTCAAGCATGGAAGTTCAATAATACAACATCGGCTCCAACAAAAAAAGGTTCTTCTGAT TCTAGATGATGTTGACAAGAAGGAGCAATTAAATGATATTATTGGAAGACCTAATTGGGTTGGTCCTGGTAGTAGAGTCA TCATCACAACCCGAAACCAACAATTGCTAGCATGCCATGGGGTTGAAATAACATACAAAGTGGAAGAGTTGACGAAGGAA GATGCTACCAAATTGTTCACATGGAAAGCTTTTAAAAACCAGGAAGTTAATTCAAGTTATGAGGACTTATTGAACCAAGC ATTGAGTTGTGCTTCCGGCCTTCCGTTAGCCTTGGAAGTAATAGGTTCTAACTTGTTTGGAAAAACAAGGGAAGAATGGG TGTCTGCATTAGAACAATATAGGAGGATTCCACTTGAAGATATCCAAAAGATACTTGAAGTGAGCTTTGATGCTTTGGAG GAAGAAGAGAAGAATGTTTTCCTAGACATTGCTTGTTGCTTCAAAGGATATGAATTGGGAGTGGTCAAGGACTTACTTTG TGCTCATTATGGTTTCTGCATAGCAAATCACATTAAGGTGTTGGTTCAAAAGTCTCTCATAACGATTACTCCGTATTTGA GTGAATTGACACTACATGACTTAATTGAGGATATGGGTAAAGAAATCGTGCGACAAGAATCACCTAAAGATCCCGGAAGC CGCAGTAGGCTATGGTCTCTTGAAGATATATTTGAAGTTTTGGAAGAAAATACGGTAAGACTAGTTCGGATGATTTGGTT GTTTATCTTTAATCTTTATTTAGCCTTTTTGATTATTCAAAGCTACTAATGTTTATATTACCATTTTCCCTCTTTATAAT ATTTCCAAGAACTTGTGTTAATGTCCTAACGTATATGTATTCATTTTGATTGATTTGTCTTTTTTTAAGGGAACAAGCAA AATTGAAATGATGCATCTAGATTACCCGTCATTTGAAGAAGTGGATTGGGATGGAGAGGCTTTCAAAGAGATGAAAAAAC TGAAAACACTTGTCATTAGAAAAACTCATTTTTCTAAAGGTCCAGAGCATCTTCCAAATAGTTTAAGAGTACTAGAGTGG TGGAAATACCCTTCACAACATTTACCAAGTGATTTCCGTCCAAAGAAACTTTCCATATGCAAATTACCCGAGAGTAGGTT TATGTCATTGGAGTTGCTAAGTTCATCAAAGGCAAGTATGATAATGATTCAATATCCTTGATCTTCTTGTGTATTATACA TCACTAATATTCATTTGATTTTTGTTTTCCTATTTTTCTTTTCTTTTTTAGCAGAAGTTCGTGAGTATGAAAGTCTTAAA TCTCAATCGGTGTGGATCATTAACACATATACCTGACGTATCTGGTCTCCCAAATTTAGAAGAGCTTTCATTTAAAGATT GTTCAAAATTAATTACGGTTGACTGTTCGGTTGGGTTGTTGGCCAAACTTAAAAGCTTGAATGCTCGTCATTGCTCCCAG CTTAGGAGTTTTCCTCCCCTCAAGCTGCCCTCTCTTGAAGAACTCGGGCTTGAAGGTTGTTCAAGTCTTGAGAGTTTTCC AGAAATATTAGAAGAGATGGAAAATATAAGTAAGCTTGATTTGAGTGGCACTAAAATAAGTAAATATCCACATTCATTTG GAAATCTGACTCGACTTCGATTAATGTGGGTTTATCACTTGCTGCCACCAAGGAGCTTAGACACGATGCCACAACTATTA TGGCACACAATCAATCAGCGGCGGATATGGGAAGAGGATAGCGAGAGTGAGAGTGAAGAAGAAGTGATGGATGGTGGAGC TATGGAATTAGTTCCGACATTGTTTCCTAACTTGAATGAAAAAAAGAGTTCCATGCTTTTGCCTTCAAAACTAGAACATC TTTTTCTCTATAAGTGCGACCTGTTAGATGAATATTTAGTATTAGTTCCCTTGTTCTTTCCTAACTTGAAAGAATTACAC ATAGAGGATTGTCCATCAATCACAGTTGAGCAACTTAGAGAAATTTGTGAGGGGATTTTGCCAAGATTAAACAAGTTAGT TGTATTCGGATGTCCATCCTTGAGTTCCAGTTGTAGAAGCATGTTGGTGAGGCAGGAACTGCATGAGGCTGTAGAAATTG ATCTTCAATTGCGAAACTTACAGATTCCAGAGTGGTATGAGCACCAGAACATGGGTCGATCTCCGTCACTTTCTTTCTGG TTTCGTAACAAAGTCCCTCTCATCTTACTATGTATTGCTTCTCCACCTTCGCCAAATATGCCTGACCATGATTATTCATG TGATTATTCACTCAGAGTAAATTCCTTCATCAATGGCTCTAAAGGTGAAAAATTTAGAGTAATTTGGGGTTGTACTCTTC TTAAGAGGCTAAGCAAAGACTACTTTGATACACATATGAGCGAAAGATGCAGGATATCAAAAAATGAGTGGAATCATGTG GAGTTTAGGACTGAAAGGGGCTTTGATTTTGGAATTGGAATCCATGTATTGAAAGAGCAAAACATGCAGGATATCCGATT CATCAATCCTTTAGACTTGAACTTGGCACTTAGAAGGATTACCCCTTGGAGTAAGTCTTGCTTTGGAGTGTATCATGCGA ATTCCTTGGAGTAAGTCTTGCTTTGCTTTGCCAAAGAGTTAGATCTGCATGCCTCACAAAACTCATCGTTTTGAGAAAAC TTAATTTGAATCATTGCAAGCTTTTTCTAGAAATTAGAAGGATTACCCCTGACTTAAAACATTCTATTCTATGTAAAAGG TCCAACTTCTTACTGCATACACCAAAGATTGTCCCTTCTCGAGGGAACCGATTCAGATTTAATGAAAACCAACATGGATT GACATCTCCAATGACATAGGTACAATATATTTTATCCTTCCTCTCCACCTGTTAAACTTTAGTTGTATTGTTCTTCGCTA TCATGTGATTGTGCTTTGATCACAATTAAACTCGGACTAAACCAAGTAACATAGTTAACACTGACAAAAATGGTTTTTAT GTAATATGGTATATCATTACCAAATGAGTAACTGCATTTTGATTACTTTTCCTTATTCTAGTGTGCTTTGAGTGTTACTA TCACTCTGTTTACTCATCTTTACTAGTCCCTTAACCTTCTCCTGTATATTCTGAACTAGATGGAGCAGTTGTGGACTCGG GAAAAGGCTCTTGTAAAATCTTCACAAGCCCTCTGGTTTCTTAAGATGCAAAATATTCAGGTCCCATGTCCCACTTTATC AAGTGACAAAGTTAGTGGAGACAACTGCACGTAAGAATCTGTGGCCGTAGTTTATCAACAACAATTGATGACTCTTTCAC AAAGCATATTGAACAAAGTCAACACATGATGTACTTGGAAGAATTTTATTTGGCTTCTTTAATGTTGGGACTCGTGTTAT TTGATGTTCCTAGTTTCCTCTGATAAATCATCAAGCATGGCAAATCGAAATACATTCAATGATGCTTCAGTTTTGTTCCC AATTTGTCTGTAGATGATGCATATCAGCAGACATGAGAACATTGATATGAGAAGCTTCATAGGAGTTCATCATAGTTAAA TTATTTTCACTGTTGAATTAGAACCAAAAAAATTGATAAGTTTTAGTCTTGTGCTTTAAAATTCATAATAAGCTTCTTTC TAGATGCATCCATATCAATGAGATTGTGCTTTTCATCTCATGATAAGATCTCAACTCACATGGAAACAAAACAATAAAAG AAAAAGCTGAATCTACTGTTTTTAAGTTGTTTGATATTTTAGGTCCAAAAATCTCCCTAGTCTCCATCCACACTGAA
CDS sequence (LotjaGi2g1v0180600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTTCCTACCATCATCATCCTCCTCTTCCATCACCTATGCATTCACCTACGATGTGTTCATCAGCTTCAAGGGTTC TGATACCCGCTATGACTTTACCGGCAATCTCTACAAAGCTCTCTATGGTAAGGGAATTCACACTTTTATTGATGACAAGG AGCTTCACAAAGGGGACGAAATCACACCATCACTTGAGAAGGCCATTCAAAACTCCAGGATTTTCATTGTTGTCCTCTCT AAGGACTATGCGTGCTCCTCATTTTGCTTAGATGAACTTTCCAAGATTCTTGACTGCTCTCAGGAAGAGGGTCGTCTTGT TTGGCCAGTTTTTTATGGTGTGGATCCTTCTGATGTGCGAAAGCAAATTGGGACGTTCGGAGAAGCAATGGCCCTGCATA CAGAGAGGTTCAAAGATAACAAGGACAAGTTGCAAAAATGGAGGATAGCTCTACAACAAGTAGCTGATTTGTCAGGCTGG CATTTCAAACATGGAGATGGATATGAACACGAGTTTATCGGAAAGATCATTAATGAAGTTTCAAGAAAGATGAATCGTGT TGCTTTACCTATTGTTGATTACCCGATTGGACTAGAGTCACAAGTGCGACAAGTAGTTTCGCTTTTGGATGTTGGGTCTA TTAATAGAGTTCACATGGTAGGGATCCATGGAATAGGGGGAATTGGTAAAACGACACTTGCTCTAGCAGTTTACAATTCC ATTGCTGACCATTTTGAAGGTTTATGTTTTTTGGAGAATGTTAGAGAAAATTCAAACAAACATGGGTTACTACATCTCCA AAAGACCCTTCTTTTGGCTTTCCTTGGAGAGAAGGAAATTGAGATAACAAGTGTCAAGCATGGAAGTTCAATAATACAAC ATCGGCTCCAACAAAAAAAGGTTCTTCTGATTCTAGATGATGTTGACAAGAAGGAGCAATTAAATGATATTATTGGAAGA CCTAATTGGGTTGGTCCTGGTAGTAGAGTCATCATCACAACCCGAAACCAACAATTGCTAGCATGCCATGGGGTTGAAAT AACATACAAAGTGGAAGAGTTGACGAAGGAAGATGCTACCAAATTGTTCACATGGAAAGCTTTTAAAAACCAGGAAGTTA ATTCAAGTTATGAGGACTTATTGAACCAAGCATTGAGTTGTGCTTCCGGCCTTCCGTTAGCCTTGGAAGTAATAGGTTCT AACTTGTTTGGAAAAACAAGGGAAGAATGGGTGTCTGCATTAGAACAATATAGGAGGATTCCACTTGAAGATATCCAAAA GATACTTGAAGTGAGCTTTGATGCTTTGGAGGAAGAAGAGAAGAATGTTTTCCTAGACATTGCTTGTTGCTTCAAAGGAT ATGAATTGGGAGTGGTCAAGGACTTACTTTGTGCTCATTATGGTTTCTGCATAGCAAATCACATTAAGGTGTTGGTTCAA AAGTCTCTCATAACGATTACTCCGTATTTGAGTGAATTGACACTACATGACTTAATTGAGGATATGGGTAAAGAAATCGT GCGACAAGAATCACCTAAAGATCCCGGAAGCCGCAGTAGGCTATGGTCTCTTGAAGATATATTTGAAGTTTTGGAAGAAA ATACGGGAACAAGCAAAATTGAAATGATGCATCTAGATTACCCGTCATTTGAAGAAGTGGATTGGGATGGAGAGGCTTTC AAAGAGATGAAAAAACTGAAAACACTTGTCATTAGAAAAACTCATTTTTCTAAAGGTCCAGAGCATCTTCCAAATAGTTT AAGAGTACTAGAGTGGTGGAAATACCCTTCACAACATTTACCAAGTGATTTCCGTCCAAAGAAACTTTCCATATGCAAAT TACCCGAGAGTAGGTTTATGTCATTGGAGTTGCTAAGTTCATCAAAGAAGTTCGTGAGTATGAAAGTCTTAAATCTCAAT CGGTGTGGATCATTAACACATATACCTGACGTATCTGGTCTCCCAAATTTAGAAGAGCTTTCATTTAAAGATTGTTCAAA ATTAATTACGGTTGACTGTTCGGTTGGGTTGTTGGCCAAACTTAAAAGCTTGAATGCTCGTCATTGCTCCCAGCTTAGGA GTTTTCCTCCCCTCAAGCTGCCCTCTCTTGAAGAACTCGGGCTTGAAGGTTGTTCAAGTCTTGAGAGTTTTCCAGAAATA TTAGAAGAGATGGAAAATATAAGTAAGCTTGATTTGAGTGGCACTAAAATAAGTAAATATCCACATTCATTTGGAAATCT GACTCGACTTCGATTAATGTGGGTTTATCACTTGCTGCCACCAAGGAGCTTAGACACGATGCCACAACTATTATGGCACA CAATCAATCAGCGGCGGATATGGGAAGAGGATAGCGAGAGTGAGAGTGAAGAAGAAGTGATGGATGGTGGAGCTATGGAA TTAGTTCCGACATTGTTTCCTAACTTGAATGAAAAAAAGAGTTCCATGCTTTTGCCTTCAAAACTAGAACATCTTTTTCT CTATAAGTGCGACCTGTTAGATGAATATTTAGTATTAGTTCCCTTGTTCTTTCCTAACTTGAAAGAATTACACATAGAGG ATTGTCCATCAATCACAGTTGAGCAACTTAGAGAAATTTGTGAGGGGATTTTGCCAAGATTAAACAAGTTAGTTGTATTC GGATGTCCATCCTTGAGTTCCAGTTGTAGAAGCATGTTGGTGAGGCAGGAACTGCATGAGGCTGTAGAAATTGATCTTCA ATTGCGAAACTTACAGATTCCAGAGTGGTATGAGCACCAGAACATGGGTCGATCTCCGTCACTTTCTTTCTGGTTTCGTA ACAAAGTCCCTCTCATCTTACTATGTATTGCTTCTCCACCTTCGCCAAATATGCCTGACCATGATTATTCATGTGATTAT TCACTCAGAGTAAATTCCTTCATCAATGGCTCTAAAGGTGAAAAATTTAGAGTAATTTGGGGTTGTACTCTTCTTAAGAG GCTAAGCAAAGACTACTTTGATACACATATGAGCGAAAGATGCAGGATATCAAAAAATGAGTGGAATCATGTGGAGTTTA GGACTGAAAGGGGCTTTGATTTTGGAATTGGAATCCATGTATTGAAAGAGCAAAACATGCAGGATATCCGATTCATCAAT CCTTTAGACTTGAACTTGGCACTTAGAAGGATTACCCCTTGGAGTAAGTCTTGCTTTGGAGTGTATCATGCGAATTCCTT GGAGTAA
Protein sequence (LotjaGi2g1v0180600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAFLPSSSSSSITYAFTYDVFISFKGSDTRYDFTGNLYKALYGKGIHTFIDDKELHKGDEITPSLEKAIQNSRIFIVVLS KDYACSSFCLDELSKILDCSQEEGRLVWPVFYGVDPSDVRKQIGTFGEAMALHTERFKDNKDKLQKWRIALQQVADLSGW HFKHGDGYEHEFIGKIINEVSRKMNRVALPIVDYPIGLESQVRQVVSLLDVGSINRVHMVGIHGIGGIGKTTLALAVYNS IADHFEGLCFLENVRENSNKHGLLHLQKTLLLAFLGEKEIEITSVKHGSSIIQHRLQQKKVLLILDDVDKKEQLNDIIGR PNWVGPGSRVIITTRNQQLLACHGVEITYKVEELTKEDATKLFTWKAFKNQEVNSSYEDLLNQALSCASGLPLALEVIGS NLFGKTREEWVSALEQYRRIPLEDIQKILEVSFDALEEEEKNVFLDIACCFKGYELGVVKDLLCAHYGFCIANHIKVLVQ KSLITITPYLSELTLHDLIEDMGKEIVRQESPKDPGSRSRLWSLEDIFEVLEENTGTSKIEMMHLDYPSFEEVDWDGEAF KEMKKLKTLVIRKTHFSKGPEHLPNSLRVLEWWKYPSQHLPSDFRPKKLSICKLPESRFMSLELLSSSKKFVSMKVLNLN RCGSLTHIPDVSGLPNLEELSFKDCSKLITVDCSVGLLAKLKSLNARHCSQLRSFPPLKLPSLEELGLEGCSSLESFPEI LEEMENISKLDLSGTKISKYPHSFGNLTRLRLMWVYHLLPPRSLDTMPQLLWHTINQRRIWEEDSESESEEEVMDGGAME LVPTLFPNLNEKKSSMLLPSKLEHLFLYKCDLLDEYLVLVPLFFPNLKELHIEDCPSITVEQLREICEGILPRLNKLVVF GCPSLSSSCRSMLVRQELHEAVEIDLQLRNLQIPEWYEHQNMGRSPSLSFWFRNKVPLILLCIASPPSPNMPDHDYSCDY SLRVNSFINGSKGEKFRVIWGCTLLKRLSKDYFDTHMSERCRISKNEWNHVEFRTERGFDFGIGIHVLKEQNMQDIRFIN PLDLNLALRRITPWSKSCFGVYHANSLE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | 7 | 160 | 154 | 1.03E-41 | ||
| Gene3D | 13 | 189 | 177 | 1.8E-66 | ||
| PANTHER | 15 | 1023 | 1009 | 0.0 | – | |
| PANTHER | 15 | 1023 | 1009 | 0.0 | – | |
| ProSiteProfiles | 16 | 157 | 142 | 29.084 | ||
| SMART | 17 | 157 | 141 | 3.1E-43 | ||
| Pfam | 18 | 185 | 168 | 1.7E-42 | ||
| SUPERFAMILY | 185 | 447 | 263 | 1.27E-66 | ||
| Gene3D | 190 | 349 | 160 | 4.0E-32 | – | |
| Pfam | 199 | 436 | 238 | 5.9E-31 | ||
| PRINTS | 219 | 234 | 16 | 7.0E-24 | – | |
| PRINTS | 295 | 309 | 15 | 7.0E-24 | – | |
| PRINTS | 388 | 402 | 15 | 7.0E-24 | – | |
| Gene3D | 422 | 787 | 366 | 1.3E-28 | ||
| SUPERFAMILY | 424 | 532 | 109 | 3.26E-24 | ||
| SUPERFAMILY | 509 | 891 | 383 | 1.02E-32 | – | |
| PRINTS | 698 | 714 | 17 | 7.0E-24 | – | |
| Gene3D | 801 | 925 | 125 | 5.3E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. | ||
| Molecular function | ADP binding | Interacting selectively and non-covalently with ADP, adenosine 5'-diphosphate. |
Expression pattern of LotjaGi2g1v0180600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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