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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0254500 |
| Transcript ID | LotjaGi2g1v0254500.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ATP-dependent zinc metalloprotease FtsH; TAIR: AT5G40010.1 AAA-ATPase 1; Swiss-Prot: sp|Q9FLD5|ASD_ARATH AAA-ATPase ASD, mitochondrial; TrEMBL-Plants: tr|A0A1J7FQG7|A0A1J7FQG7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0254500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:72053940..72058547) extracted from Lotus japonicus Gifu genome v1.2.
TCAACCCCAGCCCACATCGAAAACCCATAACCCAGAAAATTAAAGAACACAGACCCAGATCTCAAACAGGAAATGAAACG AAGAAGATGAACGTTGAAGATGGCGAAGGAAGGCTTGGTAATGGAGTCTATTGGTGGTGGTGGTTGTTGGGGTTGGGGGT GGTGAAGAAGAAGAGAGGATGGAGAAGAAAGGAGATGAAATTTAGGGAAGAAAAGTAAAGAAAAGAAGAAGAAACAAAAG GTGCGGATGCTTAGGGACGGGAATGCAGATGCAAATAAAAAATTGTGACCGATTATCTCCGTCACTAGTCCTAAAAATAA AAAAAATCTATTTCTTAATTAAATTATTAATGTTTTTTAAATTAAAATATTATTAAATAATACCACGTCAGCAATCTGTT AGATTTTGGACGGAAGTTGGACGGAAAACCAATTTTGCAACCGGGTGTAAACGTTAGGGATGTTTTTTGCTAATTTTGAA GTTTGGGGACGATTTTCACAGAAAGGCCAAAGTTGGGGGACCAAAAGTGCAATTAAGCCAATCATATACTTAGTATTGCT GAAATGGTGTAAAAATAGTTCAATGACATTTGTCTTATAATTAAATACTTGTGAGAAAACTCCTTTGTAAGCAAAATGGA AAATCTGATAGCCCCTTGAAACATTTTGGATGGTCAGAAATGGCAACTGATCGAACACAAACAACAAAACTTTCGTAATC AACTCTAAATAAAATCTAATCATAGGGAAACTGTCACGAAAATATGTAGTGCCTACATGGTACTTGCAAGTTGATATATC AGAACCAACAATGATATATACACACCTCATATTTTATACACTTCATTTCCACCTATTTTTATTTCTATCTCTCTCCTCTT ATCATCTATCACATCTTATACTTTTTTTCTCTTACTTTTTCTTTTCTTCCTATCTCTCTCCTCCTCCACCTCATCTTTGA GGTGTGAAGGAACCATTATTCATATCAGAACTCCTGTAGAAAAGGTTTTCCATTCAACTCCTTATAAATACCACATTCCC TGAGTTCATTCAACACAAAAAGTACAAGAATCTAAAAATCATTTGAGAGAACATTGCATAGTAAGGGGATGGGGCTTGGG GAAATATGGTCACAACTAGGCTCAATTATGGCTAGCATCATGTTTGTGTACGCCATGTTTGAGAGGTTCTTCCCACCACA TCTTCATATCTATGTTCGAAAATACACACACAAACTCACAGGGCTCTTCTACCCTTATATCCAAATAACCTTCCCTGAGA ATACAGGGGAAAAACTCAGAAGAAGTGAAGCTTACACTAAAATCCAGACATACCTCGGTGAGTACTCATCTCAAAGTGCC AAAAGACTTAAAGCTGAAGTGGTAAAAGATAGCCAATCCCCACTAGTTCTCAGTATGGATGACAATGAAGAGATCACAGA TGAGTTTAAAGGTGTCAAACTCTGGTGGGCTGCACACTACAGCATCAATAAATCACAGTCATTTTCATTCTACCCTTCTT CAGATGAGAAGAGGTTCTTTAGACTCACTTTCCACAAACGGTACCGTGATCTCATCACTACTTCTTACATCCAACATGTG TTGGATGAAGGCAAGAAAATTGCATCAAGGAACAGACAGTTGAAACTGTACACCAACAACCCTAGCAACGATTGGTCTAG ATACAAAAGCACAAAGTGGAGCCACATACATTTTGAGCACCCTGCAAGGTTTGAAACACTGGCTATGGATCCAAAGAAGA AGGAAGAGATTATAAACGACCTTGATGTGTTCAGAGATGGAAAAGAGTACTATGCCAAGGTTGGGAAGGCTTGGAAGAGA GGGTATTTGTTGTATGGTCCACCAGGAACTGGCAAATCAACCATGATAGCTGCCATGGCTAATTTCATGAACTATGATGT GTATGATCTTGAATTGACAGCAGTCAAGGAAAACACTGAGCTGAAAAAATTGCTGATTGAAACATCCAGCAAATCAATCA TAGTGATTGAAGACATTGACTGCTCTATTGATCTTACAGGCCAAAGGAAGAAGAAGAAAAAAGAAAAAGATGAGGATGAG GATGAGGATGAGAAACCCAAAAATCCTGCTAAGAAAGCTGAAGAAGAAGAGAAGAAGGGCAGCAAGGTAACACTATCTGG GCTGTTGAATTTCATTGATGGGATTTGGTCAGCATGTGGGGGAGAGAGGATCATCATTTTCACAACCAACTTTGTGGACA AACTTGATCCTGCTTTGATTAGGAGAGGGAGGATGGACATGCACATAGAAATGTCCTATTGTAGCTATGAAGCTTTCAAG GTGCTTGCCAAGAACTACTTGGATGTTGTTGATGATTCACATAGCTTCTTTCCCATTATTGAGAAGTTGCTGGGAGAGAC CAACATGTCTCCTGCTGATGTTGCTGAGAATCTGATGCCAAAGTCAAGAACTAAAGATTCTGATACTTCCTTGAAGAATC TGATTCAGGCTCTTGAGAATGCTAAGGAGGAGGCCAAGAAGAAGGCAGAGGAGGAAGCAAAGAAAAAAATTGAGGATGAG GAAGCTAAGTTGAAGGCTGAGAAAGATAAAGAAGAGTTGGCTCAAGAGAAAGAGGTGAAAACAAATGGAAAATCTGGGGA AGGGGTGAAAGAGAATGGTACCACTACCAACCATAAATTTGAGTTATGATATGTATGGTTGAGCATCTTCTTAGTATAAT AATACATGTATTATATGGCGTGATCAAAGTTTAATTAGTTTTAACTACTTTTCCTTCCTTTTCAAAGTAATAAATTGAAT TGATTGCTCAAGGGTCATGTCATGCATCTATTCTATGAATGATGAGTTCTTAAGATGTTTTGGGCTAACATGGAAAAGTT GTTAGGTTTTTGCTTTTCCTCACAACAGTTGACTCGGTGTACATTAAAATTTTCTAAAATGTTCATAATACAAGATAATA TAATTCAGCAAGTTTATACTACTAATTGAAAAATCATCATCATCATCATCATCACACAAGAAAACAACTAATAAGTAAGG TTTTTCTGCAACCAAATATCACATTTGACAGTAATGTTGGAATAGATCACCACAATGTCAAGAGATTAGAAAATAAAGTC CCTTGAATAGAAAATAACATAAAAAGCTTCAATTTGAAAAATGGTTGGAACCTGATAGACAAATTGTGATTACTAACAAA ATAGTTCCTTTAAAAAAAAATCACCAATTTTGTGGCAGGCAGCAACTGGACTGGAGACAGAGATGCATATTCAATTCAAA TGGAGGGAGTACAGGACACATGCTTTACCTCAGTGAGAGTCACAAGAATAGAGGAGACATAGACATGGTTCTTGGTCGCG GACTAGCGAGCTTGTGAAATAATGAGAGGGATCCATTAACTCCAAACTTACTTCAAATCTTAGTCCTCAATTTTATTCAA AAGTAACAGCTGAGATCCAAACTTACTTCTGTAGGTTTCTCGAAGAAAGGGCACCCTATCCCTTCAAGCTGCAATTTTGT GGGATGCTACTCTACGCGGTGGTCATCATCTCAGCACCCGTTCTCCTCTATCGTCCCTCCCGTATCTGCTTTTGCTGTCG TCACCAAAACTACTCTATTTCTGCTGCTCTGTTTTGACTTAAATCATGATTATGAGTATGCTATTGTGTGCTGTTATGTA TTTCAGGGAAGCCATGAAGAAGTTGCAGACGACACAGAACAAGCTGAAAATTGGTTCTCTTCCGCTTCTGCTCAACGAAT ATGTGGTGTGTATTTTACATAGTTTTAGGTTTCTCAACTCATTTACCTCCTGTTGTTGGTTCATTATACTCCCTTCTTTT CCTAATTGTGATTGTGATTGAGATAAGATTGGTGTTTGATCTTCCAATTTTGTATTTTGTAGGCAATACAACTCTTTAAC TAAAACAATTTTGCAATAAAACTCTTTAGCTACTCGTGGAGACCATAGAAGAAGAACCCAGACATTATCAGGGGCAGAAT TAATTTAGTTTTGTCGGAAAAGTAAACTCAATCACTTCAAAAATATAGTTTACTAAATCATAATTTCAAGTAATGATTTA ACAAGTTTCCAACACTCCTTTAATTTCTTTTTTATCTCTTTTTTCCTTTCAGCAATTTCGTTAGAGGTACTGGCTGGAAA TTTGAACCGGATCATTGGTTAGTGAGGCAAACTATGTACTGAGCCATATAAGTATCAAGCAGCCTTATCAATGTGGACTG TGAGGAAAAAAATTACTCGATAATTTGAATAAGAGATAGGAGTTAGAGGGTCACCCATAGTAGTACTTTCTACACTACGA ACTTGTAGCTATACACAATTAGCATGTAAGGTTTGAATTGAATATAGACAATTAAGCTGTTTTTGAACTTTATTAGTAGT CATTGATTTAGCTTTTGAGCCATTGTAATCTTGCTTGAAGTTTCTTTACGAGTCTGTTACAAAGTAAAGTGTCTTTAAGA GTTAGTTAGAAACTCCATTGTTATAACACTTTATTAAGAGTCATTGAGTATGCTTTTAAGTTTCCATTAGTTACAATTGT AATCCACTCAATAATTAGAAAGTCTAATGTTATTGAGCTTTATTCGGA
CDS sequence (LotjaGi2g1v0254500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGCTTGGGGAAATATGGTCACAACTAGGCTCAATTATGGCTAGCATCATGTTTGTGTACGCCATGTTTGAGAGGTT CTTCCCACCACATCTTCATATCTATGTTCGAAAATACACACACAAACTCACAGGGCTCTTCTACCCTTATATCCAAATAA CCTTCCCTGAGAATACAGGGGAAAAACTCAGAAGAAGTGAAGCTTACACTAAAATCCAGACATACCTCGGTGAGTACTCA TCTCAAAGTGCCAAAAGACTTAAAGCTGAAGTGGTAAAAGATAGCCAATCCCCACTAGTTCTCAGTATGGATGACAATGA AGAGATCACAGATGAGTTTAAAGGTGTCAAACTCTGGTGGGCTGCACACTACAGCATCAATAAATCACAGTCATTTTCAT TCTACCCTTCTTCAGATGAGAAGAGGTTCTTTAGACTCACTTTCCACAAACGGTACCGTGATCTCATCACTACTTCTTAC ATCCAACATGTGTTGGATGAAGGCAAGAAAATTGCATCAAGGAACAGACAGTTGAAACTGTACACCAACAACCCTAGCAA CGATTGGTCTAGATACAAAAGCACAAAGTGGAGCCACATACATTTTGAGCACCCTGCAAGGTTTGAAACACTGGCTATGG ATCCAAAGAAGAAGGAAGAGATTATAAACGACCTTGATGTGTTCAGAGATGGAAAAGAGTACTATGCCAAGGTTGGGAAG GCTTGGAAGAGAGGGTATTTGTTGTATGGTCCACCAGGAACTGGCAAATCAACCATGATAGCTGCCATGGCTAATTTCAT GAACTATGATGTGTATGATCTTGAATTGACAGCAGTCAAGGAAAACACTGAGCTGAAAAAATTGCTGATTGAAACATCCA GCAAATCAATCATAGTGATTGAAGACATTGACTGCTCTATTGATCTTACAGGCCAAAGGAAGAAGAAGAAAAAAGAAAAA GATGAGGATGAGGATGAGGATGAGAAACCCAAAAATCCTGCTAAGAAAGCTGAAGAAGAAGAGAAGAAGGGCAGCAAGGT AACACTATCTGGGCTGTTGAATTTCATTGATGGGATTTGGTCAGCATGTGGGGGAGAGAGGATCATCATTTTCACAACCA ACTTTGTGGACAAACTTGATCCTGCTTTGATTAGGAGAGGGAGGATGGACATGCACATAGAAATGTCCTATTGTAGCTAT GAAGCTTTCAAGGTGCTTGCCAAGAACTACTTGGATGTTGTTGATGATTCACATAGCTTCTTTCCCATTATTGAGAAGTT GCTGGGAGAGACCAACATGTCTCCTGCTGATGTTGCTGAGAATCTGATGCCAAAGTCAAGAACTAAAGATTCTGATACTT CCTTGAAGAATCTGATTCAGGCTCTTGAGAATGCTAAGGAGGAGGCCAAGAAGAAGGCAGAGGAGGAAGCAAAGAAAAAA ATTGAGGATGAGGAAGCTAAGTTGAAGGCTGAGAAAGATAAAGAAGAGTTGGCTCAAGAGAAAGAGGTGAAAACAAATGG AAAATCTGGGGAAGGGGTGAAAGAGAATGGTACCACTACCAACCATAAATTTGAGTTATGA
Protein sequence (LotjaGi2g1v0254500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGLGEIWSQLGSIMASIMFVYAMFERFFPPHLHIYVRKYTHKLTGLFYPYIQITFPENTGEKLRRSEAYTKIQTYLGEYS SQSAKRLKAEVVKDSQSPLVLSMDDNEEITDEFKGVKLWWAAHYSINKSQSFSFYPSSDEKRFFRLTFHKRYRDLITTSY IQHVLDEGKKIASRNRQLKLYTNNPSNDWSRYKSTKWSHIHFEHPARFETLAMDPKKKEEIINDLDVFRDGKEYYAKVGK AWKRGYLLYGPPGTGKSTMIAAMANFMNYDVYDLELTAVKENTELKKLLIETSSKSIIVIEDIDCSIDLTGQRKKKKKEK DEDEDEDEKPKNPAKKAEEEEKKGSKVTLSGLLNFIDGIWSACGGERIIIFTTNFVDKLDPALIRRGRMDMHIEMSYCSY EAFKVLAKNYLDVVDDSHSFFPIIEKLLGETNMSPADVAENLMPKSRTKDSDTSLKNLIQALENAKEEAKKKAEEEAKKK IEDEEAKLKAEKDKEELAQEKEVKTNGKSGEGVKENGTTTNHKFEL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | - | – | |
| PANTHER | 4 | 509 | 506 | 6.7E-242 | – | |
| PANTHER | 4 | 509 | 506 | 6.7E-242 | – | |
| Phobius | 6 | 24 | 19 | - | – | |
| Phobius | 25 | 526 | 502 | - | – | |
| Pfam | 28 | 123 | 96 | 2.9E-22 | ||
| SUPERFAMILY | 101 | 468 | 368 | 7.06E-55 | ||
| Gene3D | 197 | 397 | 201 | 2.6E-42 | – | |
| SMART | 242 | 399 | 158 | 3.4E-8 | ||
| CDD | 243 | 397 | 155 | 1.16028E-8 | – | |
| Pfam | 247 | 396 | 150 | 7.9E-15 | ||
| MobiDBLite | 314 | 342 | 29 | - | – | |
| ProSitePatterns | 367 | 386 | 20 | - | ||
| Coils | 448 | 501 | 54 | - | – | |
| MobiDBLite | 470 | 526 | 57 | - | – | |
| MobiDBLite | 470 | 509 | 40 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Expression pattern of LotjaGi2g1v0254500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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