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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0278900 |
| Transcript ID | LotjaGi2g1v0278900.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serine/threonine protein phosphatase 2A regulatory subunit A; TAIR: AT3G25800.1 protein phosphatase 2A subunit A2; Swiss-Prot: sp|Q38950|2AAB_ARATH Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform; TrEMBL-Plants: tr|V7C7V5|V7C7V5_PHAVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0278900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:75034447..75039764) extracted from Lotus japonicus Gifu genome v1.2.
AAAATGTCTATGGTTGATGAGCCACTATATCCAATAGCAGTGCTTATAGACGAGCTGAAAAACGATGACATCCAGCTGCG GTTGAACTCAATTCGCAAGCTATCCACGATTGCTCGTGCGCTTGGGGAGGAGCGAACTCGTAAGGAGTTGATACCGTTTT TGGGTGAGAATAATGATGATGATGACGAGGTGCTTCTTGCAATGGCGGAAGAGTTGGGGGTTTTCATTCCGTTTGTTGGG GGAGTGGAGCATGCCCACGTGTTGCTCCCGCCTTTGGAGACGCTTTGCACTGTTGAGGAAACGTGTGTGAGGGATAAAGC TGTGGAATCACTTTGTCGAATTGGACCTCAGATGAGGGAGAGTGATTTGGTTGAGTATTTCATTCCTCTGGTCAAGGTAA CTTTATTTTGTTTCACTGATATAAACATATTTATTATTACCATATGTTTAAAACATTTGGAATGTTTGTACAAAAGAAAT TTTCATTGGTCATGCTAGGTTCTTGTGCCTATCCTGGTTCTGATTATCACATTCATTTATTTTTCTAGAATTTTAAAAAT TATTTTATATGAACAAATTGGTAGTCTTCTTATGAAATAGAATGTTCTTGATTAATTCTACTGATTAACTCTGTGTTAGA AACGAGAATATCTAGAAATTATCTTGTAACATCATTATGGTATCTTAGATAATCTCTTAAGAGAGGTTTCCTTAATTCAT TACATTTCCTGATTTGTTTTCTTATTTGATTTTGGTTATGATTAGGAGTCTATTGCAAGTACAAATAGTGATTAGTGCTT TGGGTTTTGTATCACATCAATATATATTATAGAATATTATTCAGTCTATTTTATCTTTTACTTCTTTCATTACCTAAATC CCTACATTTTCAACAACTTGAATGATGCCTATATCTTGCTTATGTCACACTACTATTTGCCTGCAGTATCTAACTCCTTG GTGGTGGTGCTAATTGCTAAATGGTTGATTTATTGTAGAGAATGTTCATTAGTTATGATATGTTGAATTTATCCTGTTAG TCTGGTAGTTTAACATCTTGCTGAATATATGTTTTGCATTTTGTTTCAGAGATTGGCAGCAGGTGAATGGTTCACTGCCC GAGTGTCTGCATGTGGACTAGTTCATATTGTTTACCCAAGTGCACCAGAAATGTCAAAGACAGAGTTGAGATCAATATAC AGTCAGCTGTGTCAAGATGACATGCCAATGGTTAGAAGGTCTGCTGCATCAAATCTTGGGAAGTTTGCTGCAACTGTTGA ATATGCTCATTTGAAGGCAGACATCATGTCAATTTTTGAGGATCTTACTAAGGATGGTAATTGAATATGCATTTCTATAA AAAGTTTGTCAATTGAGTCCATAACGTATTTTCCTAGACACAAGTGGAGTTTTAAATATGTAATTTAGTTTTTGACTTGT TTCAGATCAAGACTCCGTTAGATTGTTGGCTGTGGAGGGTTGTGCTGCTCTTGGCAAGCTGTTGGAGCCACAAGACTGTA TCACTCACATACTTCCAGTGATCGTTAACTTCTCGCAGGTGCATCTTTAGGAGTGGATAAAACTATAGGTGTATACATAC GTAGTTACGTACATATATTTATGTATGGATGTATTATATTTAGCTCCTCTCCTATCAGGTGTTATATGTGTGTGTGTATG ATGTGCACTTACCAAAAATATCTCAAGATATATGATTTAATGCAGTACAATGATTTTAAAGATAATGATACGCAATACTA ACCACTATAATTATACTGTTATAGATATATTTAATTTCATCAAAATATCATTACTGCAGTGTAATGATAATGTGATATTT TATTGACGAATAGTAAACTTATAATTATGTATTCTATATTTTTTAATTTCACCTTCTATTTCCTTCTTGTTTAGTTAAAA CTTCCTATCAGGGAAAAGGAAAATAATAATTTAAACTATTCAGTCTCTTCCCTTCCCCTTCATTTTTATTTATGCCTGTA TTTATGTATTATATATATGTGGAATGTTGTGTCTGTGTCATGTACAGCAAGTGACACTTATGAATTGATTTATGATTTTT TTATCTGATTTGATTTTGCTTGATCCTGTATAGGATAAGTCTTGGCGTGTGCGATATATGGTTGCAAATCAATTGTATGA GCTCTGCGAAGCTGTTGGCCCTGAACCTACCAGGTATTTTGTTTTGGCTAATTATTAGACATGCTGCAGATCTTTCTATC ATATAATTCATGACCATAGTGGGGCGGTCATGAAAATTTTTATATGCTAACACTTATGATTCTTCTACTGGTTTCCTCTT ATATTTACTAAGCTACTGATTCAGTCTCCACTCTCCAGTCATTAGATCTACTTATGTTTGTTAAGTTTTCTCTCATGATA TTGTTTTTTTATGAAGAACGGAATTGGTCCCTGCTTATGTGCGGTTGCTTCGAGACAATGAGGCTGAAGTACGGATTGCA GCTGCAGGGAAAGTGACAAAGTTTTGCCGGATTTTAAATCCAGATCTTGCAATTCAGCATATTCTTCCTTGTGTGAAGGT GTGCATGTCTTTTGTTTTGATCATGAATTTCAGTATTCTTAAATTTACATTTGCAGGTTTAAATACTTTGCAACAACTTT TGCAGGAATTGTCATCTGATTCTTCGCAGCATGTTCGCTCTGCTCTGGCATCAGTAATAATGGGAATGGCTCCAGTATTA GGAAAGGTAAGGTACAAGTGTCAAATAGCATCTTTGTATTTATTAAGACTTTTATATAGGGTCTACTGCATTATGAATGT ATTACTTTTCATTCTGCAACGGATGCCGTGGCAATGTTGTTTAACCTTTTCTCCTTGTTCTCCGTTTTTGATCGATTTAT CGAGGAACTACTACCTATTATTCGTTTTCTTCATTGCAGGATGCAACAATTGAGCAGCTTCTTCCTATTTTCCTTTCCCT TTTGAAGGATGAATTTCCTGATGTGCGCCTAAACATCATAAGCAAGCTTGATCAAGTGAATCAGGTTTATAAACTTCTGA AGTGGGTTTTATGTGCAAATTGCTTTATACTCGTTGACAACCTGTTTCTTTTTCTCTGGTGATGCTATTATTTCTGGCAT AGTTTATGGCCTTATGCCTGCATGCAGCTCTCTACTCGCATACAAAATATAAAGCATATAAAGAAATGAAAACTTTTACA GATGTTGATCTAGTCATACTTGCAGGTTATTGGAATCGATTTGTTATCTCAATCTTTACTACCAGCCATTGTTGAGCTTG CTGAGGACAGGCATTGGAGGGTTCGGCTTGCAATCATAGAGTATATACCCTTATTGGCAAGCCAATTGGGGGTTGGGTTT TTTGACGATAAGCTTGGTGCTCTTTGCATGCAGTGGTTACTGGACAAGGTTTGAGGACAACATTTCCTTGCTCATTTTAG CATATTTTAGGGGGCCCTTTCTTCCACATGAATGTGGTTGTCAACTGCCTTATTGTTTCTTGCAGGTTCATTCAATTCGT GAGGCAGCTGCTAACAACTTGAAGCGCCTGGCAGAAGAATTTGGTCCTGAATGGGCTATGCAGCACATAATTCCACAGGT TAATGTGTCGGCATAGTTTATTGTTTTCTTATCGTGCACCAACATCAACATGTCTCTGTATGATATTATGAATGTGTTTG TGTGGGTGTATGTCTATCTCTTATTGTCTTTTATTTGAAGTTTCTTTACCTGTTTTACTTGACATTTTGATTTGGATACA TTTCATTGCTTACAATATGATGGAATTTTAGAAAATCGCATAAACCTTAGTGGATGAAGAAAAAGCCTCGTGCTGGATCA GTACAAATGTAACTCTTTTGAGTAAAGTATAAGTTACAGAGAAGCTGATATATCTTAAGGAGTTCTTTAGTTCTGGATTA TCATTTTTGCATTTTTTTTTGTTAATAATCCAGATATAAATTTTATTAGCTTGTGTGGAGAATTATATTCTAGTAACCAA TTTGTAGATATATCTTGTGTGGTATTAAAATTGCTTGAAAGTGTCATTAAGGTTCTTAAGCGTGGTATCTTGAACAAGAT AAATACTTCAATCAATTGGAGTGTGTAAGTGTAATGAATGAGTGTCAATTGGAAGTACAGATGGGGACACAGTAGTGTCA CTAGTCTTGATTGAGACTGAGAAGCTTGCACTCATCTTATCTTGTTCCAGTTTAAGTATACAAGTTTCCTTCAAAGGGAG TTGTGGTATAATGAAACTATATGTTGTTGTGCTTGTGGTACTTGGTTAAATAGGATGTCATCGACATAGAGATAAAATAA TCACTCATGAGCATAGGAATTTCACCTCTGGGCTCTGGCTAGAAATAGTTAATCTAGATTTATATTTCATTCTATGTCAC TTGGCTTCAGGAATTTCACCTCTGGGCTCTGGCTAGAAAGCTCATAGTTATGGTTTCTTTCTCTCCAAGCTTGCTTCTGT CCTCTGCTAAAGCTTTTTTGCCAGTTCCTCTGTAACATAATTTCTTGTGTTTCTGTGTCCCCCCTTTGCGGGGTCTAATT TTCATATTGAAATACCTGCTTTTGATCTTTTGTTCTAATATTTTTTTCTGCTGATCTCTCAGATGTAACTCACTAATAGC AGTATTGCATGTATGAAACACAGGTTTTGGAGATGATTAGCAATCCACACTATTTGTATCGGATGACCGTTCTTTATGCT ATCTCTTTGCTTGCTCCTGTCATGGGCTCTGAAATCACAAGCTCAAAATTATTGCCTGTTGTTGTTGCTGCATCAAAAGA CAGGTATTTCAATCTTCTTTAAATTTAAGTGTGGCTCTACTACAGTTTAAGTTTTAGCTTTCAAACTGCTGTCTGTTTGC TTCTGTGTAGAGTACCCAATATTAAGTTCAACGTGGCAAAGGTCTTGGAGTCCATCTTCCCCATAGTTGATCAACCCGTA AGGACCTAATGTTTCTATTTGTTGAGATTTCCCTATTTTCCTAATATTGTTTTAATTGTAAGTTATATATATATTTCAGT TTAGGAAACTGCTGTTCTTCAATCCCTATAAGGGATTTAATTTTGTATCAATGTATATATAAGTTCAAATACTGAGAGTT GATCTCTCCAATATGCAGAAGTGATTAATACTACTCGATAGGTCAAAAACTGATTCTGTGAATGTAATTTTCCTTCAGGT TGTGGAAAAGACAATCCGTCCAAGTCTTGTCGAGCTCAGTGAGGATCCTGATGTTGATGTAAGATTTTTTGCCAATAAAG CTCTCACGGCCATTGATCATGTCATGATGTCTAGCTAG
CDS sequence (LotjaGi2g1v0278900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTATGGTTGATGAGCCACTATATCCAATAGCAGTGCTTATAGACGAGCTGAAAAACGATGACATCCAGCTGCGGTT GAACTCAATTCGCAAGCTATCCACGATTGCTCGTGCGCTTGGGGAGGAGCGAACTCGTAAGGAGTTGATACCGTTTTTGG GTGAGAATAATGATGATGATGACGAGGTGCTTCTTGCAATGGCGGAAGAGTTGGGGGTTTTCATTCCGTTTGTTGGGGGA GTGGAGCATGCCCACGTGTTGCTCCCGCCTTTGGAGACGCTTTGCACTGTTGAGGAAACGTGTGTGAGGGATAAAGCTGT GGAATCACTTTGTCGAATTGGACCTCAGATGAGGGAGAGTGATTTGGTTGAGTATTTCATTCCTCTGGTCAAGAGATTGG CAGCAGGTGAATGGTTCACTGCCCGAGTGTCTGCATGTGGACTAGTTCATATTGTTTACCCAAGTGCACCAGAAATGTCA AAGACAGAGTTGAGATCAATATACAGTCAGCTGTGTCAAGATGACATGCCAATGGTTAGAAGGTCTGCTGCATCAAATCT TGGGAAGTTTGCTGCAACTGTTGAATATGCTCATTTGAAGGCAGACATCATGTCAATTTTTGAGGATCTTACTAAGGATG ATCAAGACTCCGTTAGATTGTTGGCTGTGGAGGGTTGTGCTGCTCTTGGCAAGCTGTTGGAGCCACAAGACTGTATCACT CACATACTTCCAGTGATCGTTAACTTCTCGCAGGATAAGTCTTGGCGTGTGCGATATATGGTTGCAAATCAATTGTATGA GCTCTGCGAAGCTGTTGGCCCTGAACCTACCAGAACGGAATTGGTCCCTGCTTATGTGCGGTTGCTTCGAGACAATGAGG CTGAAGTACGGATTGCAGCTGCAGGGAAAGTGACAAAGTTTTGCCGGATTTTAAATCCAGATCTTGCAATTCAGCATATT CTTCCTTGTGTGAAGGAATTGTCATCTGATTCTTCGCAGCATGTTCGCTCTGCTCTGGCATCAGTAATAATGGGAATGGC TCCAGTATTAGGAAAGGATGCAACAATTGAGCAGCTTCTTCCTATTTTCCTTTCCCTTTTGAAGGATGAATTTCCTGATG TGCGCCTAAACATCATAAGCAAGCTTGATCAAGTGAATCAGGTTATTGGAATCGATTTGTTATCTCAATCTTTACTACCA GCCATTGTTGAGCTTGCTGAGGACAGGCATTGGAGGGTTCGGCTTGCAATCATAGAGTATATACCCTTATTGGCAAGCCA ATTGGGGGTTGGGTTTTTTGACGATAAGCTTGGTGCTCTTTGCATGCAGTGGTTACTGGACAAGGTTCATTCAATTCGTG AGGCAGCTGCTAACAACTTGAAGCGCCTGGCAGAAGAATTTGGTCCTGAATGGGCTATGCAGCACATAATTCCACAGGTT TTGGAGATGATTAGCAATCCACACTATTTGTATCGGATGACCGTTCTTTATGCTATCTCTTTGCTTGCTCCTGTCATGGG CTCTGAAATCACAAGCTCAAAATTATTGCCTGTTGTTGTTGCTGCATCAAAAGACAGAGTACCCAATATTAAGTTCAACG TGGCAAAGGTCTTGGAGTCCATCTTCCCCATAGTTGATCAACCCGTTGTGGAAAAGACAATCCGTCCAAGTCTTGTCGAG CTCAGTGAGGATCCTGATGTTGATGTAAGATTTTTTGCCAATAAAGCTCTCACGGCCATTGATCATGTCATGATGTCTAG CTAG
Protein sequence (LotjaGi2g1v0278900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSMVDEPLYPIAVLIDELKNDDIQLRLNSIRKLSTIARALGEERTRKELIPFLGENNDDDDEVLLAMAEELGVFIPFVGG VEHAHVLLPPLETLCTVEETCVRDKAVESLCRIGPQMRESDLVEYFIPLVKRLAAGEWFTARVSACGLVHIVYPSAPEMS KTELRSIYSQLCQDDMPMVRRSAASNLGKFAATVEYAHLKADIMSIFEDLTKDDQDSVRLLAVEGCAALGKLLEPQDCIT HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTELVPAYVRLLRDNEAEVRIAAAGKVTKFCRILNPDLAIQHI LPCVKELSSDSSQHVRSALASVIMGMAPVLGKDATIEQLLPIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLP AIVELAEDRHWRVRLAIIEYIPLLASQLGVGFFDDKLGALCMQWLLDKVHSIREAAANNLKRLAEEFGPEWAMQHIIPQV LEMISNPHYLYRMTVLYAISLLAPVMGSEITSSKLLPVVVAASKDRVPNIKFNVAKVLESIFPIVDQPVVEKTIRPSLVE LSEDPDVDVRFFANKALTAIDHVMMSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 587 | 587 | 0.0 | – | |
| PANTHER | 1 | 587 | 587 | 0.0 | – | |
| Phobius | 1 | 488 | 488 | - | – | |
| Gene3D | 2 | 582 | 581 | 1.2E-252 | ||
| SUPERFAMILY | 8 | 579 | 572 | 2.42E-105 | ||
| ProSiteProfiles | 10 | 48 | 39 | 9.899 | ||
| ProSiteProfiles | 87 | 125 | 39 | 8.606 | ||
| ProSiteProfiles | 164 | 202 | 39 | 9.056 | ||
| ProSiteProfiles | 203 | 241 | 39 | 9.674 | ||
| ProSiteProfiles | 242 | 280 | 39 | 13.693 | ||
| Pfam | 242 | 270 | 29 | 1.6E-4 | ||
| ProSiteProfiles | 281 | 319 | 39 | 12.878 | ||
| ProSiteProfiles | 320 | 358 | 39 | 12.147 | ||
| ProSiteProfiles | 359 | 397 | 39 | 12.765 | ||
| Pfam | 361 | 461 | 101 | 1.2E-10 | – | |
| ProSiteProfiles | 398 | 436 | 39 | 11.669 | ||
| Coils | 446 | 466 | 21 | - | – | |
| ProSiteProfiles | 476 | 514 | 39 | 10.349 | ||
| Phobius | 489 | 507 | 19 | - | – | |
| Phobius | 508 | 587 | 80 | - | – | |
| ProSiteProfiles | 515 | 553 | 39 | 10.461 | ||
| ProSiteProfiles | 554 | 587 | 34 | 10.995 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi2g1v0278900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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