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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0437400 |
| Transcript ID | LotjaGi2g1v0437400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ATP-dependent zinc metalloprotease FtsH 1; TAIR: AT1G64110.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q7ZZ25|ATD1A_DANRE ATPase family AAA domain-containing protein 1-A; TrEMBL-Plants: tr|K7K596|K7K596_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0437400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:93397420..93403574) extracted from Lotus japonicus Gifu genome v1.2.
AATAACACAAACCAACTTCATTTTCGCGCACTCTAAAAAAAACTACCTGTCTTCACCTTTCAAATTTTCAATGCTCTTCC TTCACTCTCCAATTGTTTCTTTCTTCTATTTTCTCCTCATTTCAAAAACTCACAAATCAGAGATTAATCAAGTTTTGCGG TTAAAGTTCTGGAATAATAAAATGAGTAATGAAAAACCCTTGAAACCATTTGTTTTGTTGATTCATGTTCATCACAGAAA CAGAACATAAACAACAAGGGATCATAATAGTAGTTGTAGTAGTGGATCATAGTGATGGAACAGAAAAGCATTTTGATATC AGCATTGGGTGTTGGGGTGGGAGTGGGCGTGGGGATTAAGTTGGCTTCTGGACAAAATGTTGGCAAATGGGGAGCGAATG ATTGTTCCTCGAGCGCCATTACGGTCGAGAAAATGGAGCACGAAATGCTACGGCTAGTTGTTGATGGCAGAGAGAGCAAT GTCACTTTTGATAATTTCCCTTATTATCTCAGGTATTCCCACAACATGCAGTTTTCTCTATTCCCTTTTCCTAATTTCCA GTGTTGTTATTTCCTAGTTTGATGTAATTAGCATAACTGCAAATCTCCTTATGATTTTTTCCCAATATGGTTGGTATGGT ATATATAATATTGAGATGATTTTATGTCATCTTCTGCCAATTAACAAACAATAAGTAGCAGACACATGTTGAGATGATGT TACAGATTAACACAACATAACCTTATATGGTGATTAAATGTGGATATTGTTCATGAACTGAGAATAACAATCAACATATT TAACATGTGTACTTTGGAATTGAAAATTTTACTCAATAATAAGTCATGCCCCATCTATGAAGTACTTAAATGAAAGCATA ATTTCTGAGATCTGCTACTTCATTATACCAATTCAATCTCTTTTCTGCTATAACCCTTCCTGTTTCACATGCCATGACAG TGAGCAAACACGGTTGTTGCTGACAAGTGCTGCCTATGTCCACTTAAAGCATGCAGATGTTTCAAGACATACCCGGAATC TTGCTCCTGCAAGCCGGACTATCCTACTCTCAGGGCCAGCAGGTTAGTCGAAACCTGCTATTTCCTAGAGAGAGATTGAT AAGCTTTAATGTTTCTCCTTTAACTAATAAAATTTTCTTTTATTACAGAATCTTACCAACAGGTTCTTGCCAAGGCTTTA GCTCACTACTTTGAGGCGAAGTTGCTTCTGTTAGATTTAACTGACTTCTCATTGAAGGTAAGTGTAAAAAGTTATGGTGT CATTCAACTTTCTTTTGTAAATTATTGTAAATTGTAAATAACGGTTGGTCTGTCATCTGTACAGATACAAAGTAGATATG GTTTTGCCAACAATGAATCTGTAAGCTTTACCTAATTTAACTTTTATTTGTTTTACTTCTAAACATCTTAGATGAACACC CCCCCTTATTTCTTGACCTAACGTTCAGGCTCCTGTTCTTTTCCCTTTGTTTTTTGTTTCAGTCTTTCAAAAGATCTACT TCAGAGTCAACTTTGGACCGACTATCTGACCTATTCGGGTCTTTCTCAATATTTCCACAAAGAGATGAGCCTAAAGGTAT AGAATGATGAACATTTCCCAACCTAGGTGGATAACTTACTTCATAATAACTGAATGCTTTATTAATCTTCTAATACATGA CTCTTGAACCTTGTTTTGGTTTCAATAATAAGTTTTTATGTTTTATCAGGAGAAAAGTATTAATGATTATAACATGTACT TGATGAACTCATGCTGCATAAGTTTTCAGGCTCTAGATAGGGTAGCAGTGCAAGTAGCTTTAGCAGTCAATTTTTATAGC TACTAGCTACTTCTCTCTTTGTTGGGGCATTAACAATTCTATGTGATGGCAGTGATGCACACTTTGTTTAACAGCTAATC AAAATTATATACCTAACCAAAAGCTTTTAGTTCCAGGAAATATCCACAGGCAAAGCAGTGGAGTGGACCTCCGATCAATG TAAGGAGAATAGGTGTTTATGAATATATTTTGTTGCTAGTTTATTTATATTATTTCTTAGTTTTTTCCTTTCTTTTTGTA GGGAGCCTGAAGGATCTTGTAATCCTCCTAAACATCGGAGATATTCGTCCGCATCTGCAAATATTAGTAGCCTTGGTTTG CAAAGCAATCCTACAAATTCAGGTTGCTAATTAACTTGATTTACTTGTTCCATCAGCTGGAGACATAGTTTTCAGTATAG TGAACCTGATTTAGGAATTGTTGTGAATGCTTAGAGTATAAACCTGAGAAGAAAAGAGGATAATTTTAAATTATGTTTTC TTGAATACACTTAGAAACAGAACCCAAATTTGTAATGTGGTGTTGCAAAATGTATGTTTATAGAAATAGTTTTGAAAATG GGTTGGATTCTTAATCTTTCAGTATGAGAAATAATACAATGTAAAGTCAAGCCACATTCATATAGTTTGTGGAGGTCAAA TATCTTCGCTCTTGTTTTTTGTCTTTGTTCTCTCTTCTAATCCCTTACATCCTCTACCTTTAGCTCCTCTGAAGAACGTT ACCAACTGGTCTTTTGATGAAAAGATTCTCATTCAGACTCTTTACAAGGTAATGTTACTTTTGGTAATATGAGAGATTTT TGCTTGAACGCATTAACATATTTTTTTAGGAAGGCTTTACATGGTATTTGTTTGATAAATTGAAATTTCACTTGCAGGTT TTAGTTTATGTGTCAAAAACCTTTCCCGTTGTGCTATATCTACGGGATGTTGATAAGTTGTTACATAGATCGCAAAGGAT GTATAAACTATTCCAGCAACTGTTGAAGAAATTATCTGGACCAATTTTAATTCTTGGTTCACAAGTTCTGAATTCTAGTG ATGATTGCCTAAAAGTGGATGAGAGGCTTACTTCCCTCTTCCCCTACAACATTGAAATCATGCCACAAGAAGATGAATCT AACCCTGTCAGCTGGAAATCTCAATTTGAAGAGGAGGTTAAGAGGATACAGACTCAGGATAACAAAAACCATATCATGGA AGTGCTCGCAGCCAATGATCTTGATTGTGATGACCTGAATTCCATCTGTGTAGCAGACACAATGATTCTCAGTGACTATA TAGACGAGATTGTCATGTCAGCAGTTTCTTATCATTTAATGAATAACAAAGATCCTGAGTACAGAAATGGGAAACTCGTT ATTCCATGCAGTAGGTGAGACTGGCAACTTTAACTGCGTGAACTATCTACATTTGATATACTTACATTTTTTTTTTTTGA AACAGTTTGTCCCATGCATTCGGTATATTCCACGAGGGAAAATTCAGGGGAGGAGATACATTAAAATTAGAAGCTCAAAC AATAACATCGGAGGTTAGTATTGCCTGTTATGATCGCACACTAAGTTGTTAATCATATCTACCAGGTACTCATATGACAT GTATGTCCTTTCTCTCTCTTTTTGAATTATGTTGTATAAAGCAGAGAGAGGAAGGGGCTGTTGTGAATCCAGAAGCAAAA TCTGAAAATCCTGCTCCTGATATAAAGGCTGAAGCAGAAAGACCAACTTTAGTCGAAAAAACTGAAGGTGAAAATTCAGT TCCTGCACCCAAAGCTGTAAGCATCCTCCTTTGTTTTTAATTTTAATATTCATAATGATTTGATTTTAACAGCATTGAGA TCATGCTCGCAAGTCTCTCATCAACACAACAACTTCTATATATAATATATCTATTAACTCTAGGTCCCCATCTCAAATGT GAATGGTGTGGTAGATGGTTTTGGTGGTTAGCTATATATCTCATAAGTGTTTTCTTTTACTATGTTATGATGAATTTCCC TTTTGGTTTTCTGTAAATTTATTTAATATCAAACATTCACTTGTAGGAAGTTCCTCCTGATAATGAGTTTGAGAAGCGAA TAAGGCCTGACGTAATACCAGCAAACGAGATCGGTGTAACATTCTCCGATATTGGTGCCTTAGATGAGACCAAAGAATCG CTACAAGAACTAGTAATGCTTCCTCTCCGAAGGCCAGACCTTTTCAGTGGCGGCCTTCTAAAGCCTTGTAGAGGAATATT ACTATTTGGGCCTCCTGGCACCGGAAAGACAATGCTAGCAAAGGCCATTGCAAACGAGGCTGGAGCGAGTTTCATCAATG TATCCATGTCCACCATCACCTCTAAATGGTTCGGTGAAGATGAGAAGAACGTTCGTGCTCTATTCACACTGGCAGCCAAA GTCTCCCCAACTATTATATTTGTTGATGAGGTTGACAGTATGCTTGGGCAGCGAACAAGAGTAGGGGAGCATGAAGCCAT GCGTAAAATAAAGAATGAGTTTATGACACTTTGGGATGGGCTTATGACAAAACCAGGGGAGCAAATCCTTGTTCTTGCTG CAACCAATAGGCCATTTGACCTGGATGAGGCAATTATCAGACGATTTGAAAGGAGGTAACTAATAGTTCTTGATTTACTC TTTCTTCTTGTTGCTACAATCTTTCTACTTCCTTCATTTATCTTCTATACGTTTATACTTCTTGGTTGTAAATTCAAGTT ATAGGAAGGGAAAGATAAGATAACAATATGTGACATAAATGCTATGCGTGTGTAACAATCTGAATACCCTGAAATGTACT TACTACAATGCTCATCATTGATCACAGAATTATGGTAGGACTACCATCTGTGGAGAACAGGGAAAAGATATTGAAGACTC TTGTGGCTAAAGAAAAGGTGGACGAGAAACTTGATTTTCAGGAACTCGCAACTATGACAGAAGGATATACCGGAAGTGAT CTAAAGGTTTCTACAATTCTTTATTATCATTTTACCATGGATGTAACTGTCTTGTTACAACCTGCAAATGTTTTCATTAT TTTGAACTTTTGATGACTAACTTTTTTCATGGTCATTAATTGTTAATTGCAGAACTTGTGCACAACTGCTGCTTATAGGC CTATTAGAGAGTTGATACAACAAGAAAGACTAAAGAGTTTGGTAAGTTTACTACTTCTTTCAAGATTTATTACAATCCCC AGATTATATGATTATGATGTTGACTTTTCCATTTTTCTTAGCAGGGGAAAAAGCAGGAAGATGTTGAAGGACAATATAAC AATGTCCATGATGAGCAAGGAAAGCAATATGCAACAAGAAATGGCAACGATGCTGAGGACGCAGAAGAGGAAGTCGAACA GGAAAGAGTTATTACCCTAAGGCCTTTGAATATTCATGACTTCAGAGAGGCAAGGAGTCAGGTAAGACTGTTGTATAATT AGCCAAGAAACTTCTTATGATACCCTCATTCTCTAACTTAATCGTTTATGCCTACTTCCTTTGCTTTAATTTAATTTAAT CAGCAGACATGAAAATATTGGTTCTTGGTTTGTTTTGTCTCTAATATATGTGTATTTATATTACTTCATTTGATCACCTT CTTGGAACCCAGGTCTCCGCAAGCTTCGCATCTGAGGGGGCTGGAATGAGTGAATTGAAACAGTGGAATGATTTGTATGG GGAAGGTGGTTCAAGGAAGAAAGAGCAGTTATCTTACTTCCTTTGAAAATTACCAAAGTAAGAAAGCAATTAGGAGTTTG TCACTGATTATACATACGTGTATAAGTTTCAATTGTATCTTTTAGCAATGTTTGGTTTTATTTTTTTACCATAGGATATG AGCATTGTTGTAACTAATAGCATAGCTTAACTAAGAGTTTTCTCTAACCCTCTCACACAACACCCATTTTCTACACGTAT CAGTACAATGAGCACTGATACGTGGATATACAATTTTTATCCGACACCCTTCTGACATACTTCACATTAGTGGCGGCGAC AAACATTTGCAACCCGTTAATGTGTATGGAAAAATATCTAACAAAACTGTTTGTTGGCCATCATTTCCATTGTTTCACAA CACTGAGCAGGTGTTTCGGCCTAATTTAGATTTATTGGGAATATTCAATATAGTACTGTGATGTAGTGCTTATAAAAAAG TCTTGATTAGTGGAGTATAATACATGATCCATGAAGGAAAGACAGAAACTTTTATAACAAAGATTCCCATACGAAGCAGG AAATGAGAGAAAGTAGTATGAGTCAATGAACTTTATATCCCAAAAGGAAGCTTAATTAGTGGACCTAAAAAGAAG
CDS sequence (LotjaGi2g1v0437400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAACAGAAAAGCATTTTGATATCAGCATTGGGTGTTGGGGTGGGAGTGGGCGTGGGGATTAAGTTGGCTTCTGGACA AAATGTTGGCAAATGGGGAGCGAATGATTGTTCCTCGAGCGCCATTACGGTCGAGAAAATGGAGCACGAAATGCTACGGC TAGTTGTTGATGGCAGAGAGAGCAATGTCACTTTTGATAATTTCCCTTATTATCTCAGTGAGCAAACACGGTTGTTGCTG ACAAGTGCTGCCTATGTCCACTTAAAGCATGCAGATGTTTCAAGACATACCCGGAATCTTGCTCCTGCAAGCCGGACTAT CCTACTCTCAGGGCCAGCAGAATCTTACCAACAGGTTCTTGCCAAGGCTTTAGCTCACTACTTTGAGGCGAAGTTGCTTC TGTTAGATTTAACTGACTTCTCATTGAAGATACAAAGTAGATATGGTTTTGCCAACAATGAATCTTCTTTCAAAAGATCT ACTTCAGAGTCAACTTTGGACCGACTATCTGACCTATTCGGGTCTTTCTCAATATTTCCACAAAGAGATGAGCCTAAAGG AAATATCCACAGGCAAAGCAGTGGAGTGGACCTCCGATCAATGGAGCCTGAAGGATCTTGTAATCCTCCTAAACATCGGA GATATTCGTCCGCATCTGCAAATATTAGTAGCCTTGGTTTGCAAAGCAATCCTACAAATTCAGCTCCTCTGAAGAACGTT ACCAACTGGTCTTTTGATGAAAAGATTCTCATTCAGACTCTTTACAAGGTTTTAGTTTATGTGTCAAAAACCTTTCCCGT TGTGCTATATCTACGGGATGTTGATAAGTTGTTACATAGATCGCAAAGGATGTATAAACTATTCCAGCAACTGTTGAAGA AATTATCTGGACCAATTTTAATTCTTGGTTCACAAGTTCTGAATTCTAGTGATGATTGCCTAAAAGTGGATGAGAGGCTT ACTTCCCTCTTCCCCTACAACATTGAAATCATGCCACAAGAAGATGAATCTAACCCTGTCAGCTGGAAATCTCAATTTGA AGAGGAGGTTAAGAGGATACAGACTCAGGATAACAAAAACCATATCATGGAAGTGCTCGCAGCCAATGATCTTGATTGTG ATGACCTGAATTCCATCTGTGTAGCAGACACAATGATTCTCAGTGACTATATAGACGAGATTGTCATGTCAGCAGTTTCT TATCATTTAATGAATAACAAAGATCCTGAGTACAGAAATGGGAAACTCGTTATTCCATGCAGTAGTTTGTCCCATGCATT CGGTATATTCCACGAGGGAAAATTCAGGGGAGGAGATACATTAAAATTAGAAGCTCAAACAATAACATCGGAGAGAGAGG AAGGGGCTGTTGTGAATCCAGAAGCAAAATCTGAAAATCCTGCTCCTGATATAAAGGCTGAAGCAGAAAGACCAACTTTA GTCGAAAAAACTGAAGGTGAAAATTCAGTTCCTGCACCCAAAGCTGAAGTTCCTCCTGATAATGAGTTTGAGAAGCGAAT AAGGCCTGACGTAATACCAGCAAACGAGATCGGTGTAACATTCTCCGATATTGGTGCCTTAGATGAGACCAAAGAATCGC TACAAGAACTAGTAATGCTTCCTCTCCGAAGGCCAGACCTTTTCAGTGGCGGCCTTCTAAAGCCTTGTAGAGGAATATTA CTATTTGGGCCTCCTGGCACCGGAAAGACAATGCTAGCAAAGGCCATTGCAAACGAGGCTGGAGCGAGTTTCATCAATGT ATCCATGTCCACCATCACCTCTAAATGGTTCGGTGAAGATGAGAAGAACGTTCGTGCTCTATTCACACTGGCAGCCAAAG TCTCCCCAACTATTATATTTGTTGATGAGGTTGACAGTATGCTTGGGCAGCGAACAAGAGTAGGGGAGCATGAAGCCATG CGTAAAATAAAGAATGAGTTTATGACACTTTGGGATGGGCTTATGACAAAACCAGGGGAGCAAATCCTTGTTCTTGCTGC AACCAATAGGCCATTTGACCTGGATGAGGCAATTATCAGACGATTTGAAAGGAGAATTATGGTAGGACTACCATCTGTGG AGAACAGGGAAAAGATATTGAAGACTCTTGTGGCTAAAGAAAAGGTGGACGAGAAACTTGATTTTCAGGAACTCGCAACT ATGACAGAAGGATATACCGGAAGTGATCTAAAGAACTTGTGCACAACTGCTGCTTATAGGCCTATTAGAGAGTTGATACA ACAAGAAAGACTAAAGAGTTTGGGGAAAAAGCAGGAAGATGTTGAAGGACAATATAACAATGTCCATGATGAGCAAGGAA AGCAATATGCAACAAGAAATGGCAACGATGCTGAGGACGCAGAAGAGGAAGTCGAACAGGAAAGAGTTATTACCCTAAGG CCTTTGAATATTCATGACTTCAGAGAGGCAAGGAGTCAGGTCTCCGCAAGCTTCGCATCTGAGGGGGCTGGAATGAGTGA ATTGAAACAGTGGAATGATTTGTATGGGGAAGGTGGTTCAAGGAAGAAAGAGCAGTTATCTTACTTCCTTTGA
Protein sequence (LotjaGi2g1v0437400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEQKSILISALGVGVGVGVGIKLASGQNVGKWGANDCSSSAITVEKMEHEMLRLVVDGRESNVTFDNFPYYLSEQTRLLL TSAAYVHLKHADVSRHTRNLAPASRTILLSGPAESYQQVLAKALAHYFEAKLLLLDLTDFSLKIQSRYGFANNESSFKRS TSESTLDRLSDLFGSFSIFPQRDEPKGNIHRQSSGVDLRSMEPEGSCNPPKHRRYSSASANISSLGLQSNPTNSAPLKNV TNWSFDEKILIQTLYKVLVYVSKTFPVVLYLRDVDKLLHRSQRMYKLFQQLLKKLSGPILILGSQVLNSSDDCLKVDERL TSLFPYNIEIMPQEDESNPVSWKSQFEEEVKRIQTQDNKNHIMEVLAANDLDCDDLNSICVADTMILSDYIDEIVMSAVS YHLMNNKDPEYRNGKLVIPCSSLSHAFGIFHEGKFRGGDTLKLEAQTITSEREEGAVVNPEAKSENPAPDIKAEAERPTL VEKTEGENSVPAPKAEVPPDNEFEKRIRPDVIPANEIGVTFSDIGALDETKESLQELVMLPLRRPDLFSGGLLKPCRGIL LFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAM RKIKNEFMTLWDGLMTKPGEQILVLAATNRPFDLDEAIIRRFERRIMVGLPSVENREKILKTLVAKEKVDEKLDFQELAT MTEGYTGSDLKNLCTTAAYRPIRELIQQERLKSLGKKQEDVEGQYNNVHDEQGKQYATRNGNDAEDAEEEVEQERVITLR PLNIHDFREARSQVSASFASEGAGMSELKQWNDLYGEGGSRKKEQLSYFL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 850 | 850 | 0.0 | – | |
| Phobius | 1 | 26 | 26 | - | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| PANTHER | 1 | 850 | 850 | 0.0 | – | |
| Phobius | 6 | 17 | 12 | - | – | |
| Phobius | 18 | 26 | 9 | - | – | |
| Phobius | 27 | 850 | 824 | - | – | |
| MobiDBLite | 187 | 216 | 30 | - | – | |
| MobiDBLite | 451 | 500 | 50 | - | – | |
| MobiDBLite | 467 | 483 | 17 | - | – | |
| Gene3D | 518 | 690 | 173 | 1.0E-93 | – | |
| SUPERFAMILY | 519 | 748 | 230 | 2.31E-60 | ||
| SMART | 555 | 692 | 138 | 1.2E-20 | ||
| CDD | 557 | 690 | 134 | 1.81921E-24 | – | |
| Pfam | 559 | 689 | 131 | 4.7E-38 | ||
| ProSitePatterns | 662 | 681 | 20 | - | ||
| Gene3D | 691 | 758 | 68 | 1.0E-93 | – | |
| Pfam | 713 | 747 | 35 | 3.5E-10 | ||
| MobiDBLite | 764 | 790 | 27 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Expression pattern of LotjaGi2g1v0437400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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