Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi2g1v0442100 |
Transcript ID | LotjaGi2g1v0442100.3 |
Related isoforms 3 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Dynamin-like family protein; TAIR: AT5G42080.1 dynamin-like protein; Swiss-Prot: sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A; TrEMBL-Plants: tr|A0A0L9TH92|A0A0L9TH92_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0442100 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:93807910..93813475) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAGAACCTAATCTCTTTAGTCAACAAAATCCAGAGGGCTTGCACCGCTCTCGGCGACCACGGCGAAGCCACCGCCTT ACCCACTCTCTGGGACTCTCTCCCCGCCATCGCCGTCGTCGGTGGCCAGGTACCGTTATTTCTCAACTAATCAATAACTA ACTTCCTTTTCATTCACACTGATTCCATTCAATTCCACCTTCTTTCAGAGCTCTGGAAAATCCTCAGTGCTTGAAAGCGT TGTTGGCAAGGATTTCCTACCTCGTGGTTCAGGTAATTGATTCTAACACCCACATCTGTCATAGCCAAGAATTTGGTTGC ATGTTTTGAGAAATTGATGAGGTGCATGCAATTTTGTTGCAGGAATTGTTACCCGGCGACCCCTTGTTTTGCAGCTTCAA AAAATTGAAGAGGGTAGCAGAGAGTATGGTGAATTTCTACACCTTCCCAAGAAAAAATTCTACGATTTCGGTACTTTCCT TTCCTCAATTCCAACTCCTATAATTCCTTATGTTTGCTCATAACTGGTCACCCCAATTTTTATTTTTGTGTTGTTGAAAT TTCAATGATGATTTTATTTTGGTTTTGAAGTGATACAATTTAATTTGTTATGTGCAGCTGCTGTGAGAAAGGAGATTCAA GATGAAACCGATAGAGAGACTGGACGATCGAGAATGATTTCAAGTGTCCCGATTCACCTTAGTATATATTCTCCTAATGG TGTGTTTCAATACTAGCTTACATTACTATTTTATGTAATTTTTTTTACTTGGCTTATTTTGTATGCAAATTTTCAACTTA CCAAGACCCCTTTGACCTTTGCAGTTGTTAACTTGACACTCATTGATCTTCCTGGCCTTACAAAGGTAGCTGTAGGTAAG TATCAAGCTGGACATGTTTTTCTTGTCCTTGGTTTTGTGACAACTCTGTCCGAATTGTTAAATTATTGTTCTGGGGGTTT GGAAATGGAGAGTGATATGCTAACAACAGATGGTTTTGCAAAATACAGAGGGTCAACCAGATAGTATTGTCCATGACATT GAGGATATGGTTCGGTCCTATATTGAGAAGGTAGTGCCCTGTCTCTAATAGCACTCTTGAGGAACCGGTTTTGCAAGACA ACATACTTCATATATTTTCCGTGCCACTACTTGTATGATATGATTCTGTAGTCTTAATTTGCATTTCTAGAAAAATTGAT CTTGCAAAGTTGGCCGATTGTGCAAATATCTGGCTGTATTTAATTTGTATAAACTCAGTAGGTTTTTCAACAACTGAGGA AAATGCTTATATAATATTTCTTAATGGACATAGTTATAATGATTTCTACATTTGACGAAATGTGATATGTTGATTTAATG TTAATATGCAGCCAAACTGTATAATTTTGGCTATTACACCTGCCAATCAAGATCTTGCAACATCTGATGCAATTAAAATC TCGCGCGAAGTAGACCCCAATGGTAATTTCATTATTTTGTTTCTGTAGGCGTCAATTACTCTTTATGTTATGTCATTTAA CAGTTTTTCATTGGTTTCAAAAACCGGTGAATTAGAAAATGTATATTCCACTGTGATTCTGACAGAGTGACAGTTGAAGA ACTTTATTGATTTGAACACCTAGAAGGATGTAGTCTGCTCCTGTTCTAATTCTTTGGTTCTCGATTTCAATTTCCAGGTG AAAGGACAATTGGAGTTTTGACAAAGATTGATCTTATGGACAAGGGTACTGATGCTGTTGACGTGAGTCAATCTTATTTT TAGTTATGAGAGGACAACGATGCAATCGGTTGATGATAGTTCATTTATTGTCATACTTTGAAACTATTGAAAGCTGTTTG AAATTTTTCGTGCTTGTCCTGTTATATTGAAATACTGAAATCAAACACCTCCCTTCTAAGGTTTTGCTATTAGTTTCCCT TTTTCTTAAGATTGGTCATCATTTAATGGATGCTGAAGAGAGAAGCAAGAATACTAATTATTAATTGCTAGAACTGACAG TGACATTTTCATTATGGATGGAACCTCTTTCTAAGCAGGAGCAGTGTGCATTATATTCCAATAGATGATGATTGTCATAT AAACTCCCCACTCCCCCCCATTCTATCAAAGAGATAATTTATGGATGAGATGACTGAGCATATTTCGTTACCTTGTTAAA GAGAGCAAACTTATCAAGAAATTGATCTTTATATAAGAACGTGGTTGATTTCAAACAGTTAAATCTAGTTTTTGTTGTAG AGATTAGCTTGTTTAAGTTTTGATTGAAAAAGAAATTAACAGTTCCATAGTAGATTATTGAAATGGAAGGTCGATATAGT CCATACTGCTGAAGGTATCTTGTGTTTTAAGGCATTCTTTCTGCTGAAGAATTTAGCTTACTTAAGTTACATTTTTTTTC ATTCTATGACGTGAACCTGAATAACAGGCACTCTCAGTGCTGCGAAACGTAGCTACTTGATTCAGTACTGAGATCTCTAT TACATATATTTTTTATTACTTCAGATGTTGGAGGGGAGAGCTTATAAGCTAAAGTTTCCCTGGATCGGTGTAGTCAATAG ATCACAAGCAGATATTAACAAGAATGTTGACATGATTGCTGCTAGGCGTAGCGAACGTGACTATTTTTCTAATACCCCTG AATATAGACACCTGGCTCACAGAATGGGTTCCGAGCACCTTGCAAAGATGCTTTCAAAGGTACAGAAATAACGATTGAAT GTAATATAAATTTTTCATTTATAATTATTGTTATTATATTGTGTCACTTGTTTCTATGACTAAATTGTAATGCTTTTCTC AGCATTTGGAGACAGTAATCCAGTCCAAAATTCCAGGCATTCAATCTCTTATTAATAAAACAATTGCTGAACTTGAAGCT GAACTGAGTCGTTTGGGAAAGCCTATTGCAGCTGAAGATGGGGTAATTTTTCTCTTCAAAGCACAGCCAATTTGAATTTT AAGTATCAATTCATAAATCTTTGATTATTATATGGGTTCACTGTTGAATAAGGCCTTTTATTTCCACCCTTCTATTCTCG TGTATGTGATTAATGAATATCCATTCCAACAATTAATCATTGAATTTTCTAATGAATGATTGCAAATTACATGCAGGGCA AGTTGTATGCAATCATGGAAATATGTCGCTCATTTGATCAAATATTTAAAGATCATCTTGATGGCGTGTATGTGTTTCCT TTCTTTGTGTTTATAAATTTTTAAATAATTCAGTTCCTATTTTCTTTGTTTCACTATCCTTGTACTCGATTCATTTTTTC AAACTAACTTCAATTATTTGTCAATCTCCTACAGGAGACCTGGAGGTGATAAAATTTATAATGTCTTTGACAATCAGCTC CCTGCTGCTTTGAAAAGGTTGCAGTTTGATAAGCAGCTCTCAATGGAAAATATAAGGAAACTTATTACTGAAGCTGATGG GTATCAACCTCATCTAATAGCTCCAGAACAAGGATATCGTCGCCTCATTGAATCTACTCTTACTACTATCAGGGGTCCTG CTGAGGCAGCTGTTGATACGGTACATTGAAATTGGAGAATAGTAATACAAAAGTTGTTGTTATTAAGTGCCTTAATTTGA TGTCCCCGTTGCTCATAGAAAGTCATTTAAATTCTATTTTAAAATTGTTATTTCATATTCACAGTCATGTGTACCTCTTT CTGGTTCTGGTCTCCATTCCAGTCTGAAATGCTTTTGAAACTTAATTGGATTACATTTTCTATTACCATCAATAAATGGT ATCCATGGAATAATAATCCACAGTAATTAGAAGTTCACCACTGATATCACTCCTCTTAATGGAATTTTTTTTGTTCCCAA AAGCATGTTGTGAGATCTTGTGTTGAAGAAATTACATGGTGAGATAACATACTAAAGTGCACCCCTTTTTATTGTAATTC TAATTGATAAGTTGGCCTTCTTTCTGATTAAAAAAACCTTACCACCATCCTCCACCTTGTTAAAATACCTTTAAGATGGG AAAATTTACCAATTTAGTTTTTTATTTATTATGTATTTTTGTTATAGGTAATTGAACGTTTAACCTTTGCTGTTCTCATC CTTTATATTTATTAACAGCATTTTGAATTGTATGCCACCAGGTTCATTCACTATTAAAGGACCTGGTTCACAAAGCTATT AGTGAGACTCTGGTATGATTCTGACAATACTAAAATTTAGTGTTTCTATTGTACTAATTTCTTGCTGTTGTGTTTCAGAC TAAATAGGTTTTGTACTTAAGACGCTGTTATTTTGTCATGTTTATTCTAGTGAGACAGGGTTCATTTTGCAATATCACTT AAATCTTCAAACGTGAAGCTTAAAAAAATAAATGTTTTGAGGGGTAATAAAATTGCCTAGATGCTGGTGTACATAACCTC TCTACTTGTAAAACAGCTGAAATAGTAGAAAGATCTTCAAGGTTTTTTTTATTTTTTTTTATCAAAGACCACTGTTTGGT CAACCTGTCATGCAATAGGAAACGCTTCTAAATAAATCACCACAATTTTTATTTTTCTGATTTGATGCATAGTCGTGTTT CTGCAACAAAGAACCTTGTGTTAGAAGGAGCTGATTTGTAGTGTGGGGCAATAACCTTGTGGACTCTCTGTTCCCTCATT GCTTGCAATCTCTTTCTTCTATCCCTTTATCCTATGTTATCTGCGGTTCCCCTTGTACTCTCCCAACTAATATACTCGTG GCCTGACTAACAGGAATTGAAGCAATATCCTGGTCTGCGGGCTGAGGTTGGAAGTGCAGCTATTGATTCACTAGATAGAA TGAGGGAGGAAAGCAAAAAAGCAACACTACAGCTAGTTGATATGGAGTGTGGTTATTTGACAGTTGATTTCTTTCGGAAG CTTCCTCACGATGTTGATAAGGGGGGCAATCCTACACATTCACTTTTTGATAGATATAACGATTCATATCTTAGGCGAAT TGGTAAGTTTTACAAAATACAGTTTCAAACTTGACTCAAATCATACTTTCTTCTTACTGGTTGCAATTTGTTGAAAATGT TAATGAATAGAGAGATACTAACGCTCTCCCTGTAAACAGGAACCACGGTTTTGTCTTATGTCCATATGGTCTGTGCTACT CTGCGGCATTCAATTCCCAAGTCAATCGTGTATTGTCAAGTGCGGGAAGCCAAAAGAAGCCTGCTTGATCACTTTTTCAC TGAGATAGGCAAAATTGAGGTGAGAGTAATAGCATGTTTGGAAAAAATGCACATTCACAAGCTGCTGAGAGTAGTTTTTC TCATATTTACGCTATTATAGGGTAAAACAAATATGCAGTAAATCTGTCTTTCCTGGTTTCTCATATTTACTCAAGCTTTT GTTTGTGTATATTAGTTTTATATTCTGGCCTATTTTCGTTTAGTTTTCAGTTAGCCTGAACACATGTCTATTTGTAGCCC AAGCGTTTGTCCTCATTGCTGAATGAGGATCCTGCAGTCATGGAACGACGCGGTGCCCTTGCAAAGAGGCTTGAGTTATA CCGGAGTGCGCAAGATGAGATTGATGCAGTTGCTTGGTCTAAGTAG
CDS sequence (LotjaGi2g1v0442100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAACCTAATCTCTTTAGTCAACAAAATCCAGAGGGCTTGCACCGCTCTCGGCGACCACGGCGAAGCCACCGCCTT ACCCACTCTCTGGGACTCTCTCCCCGCCATCGCCGTCGTCGGTGGCCAGAGCTCTGGAAAATCCTCAGTGCTTGAAAGCG TTGTTGGCAAGGATTTCCTACCTCGTGGTTCAGGAATTGTTACCCGGCGACCCCTTGTTTTGCAGCTTCAAAAAATTGAA GAGGGTAGCAGAGAGTATGGTGAATTTCTACACCTTCCCAAGAAAAAATTCTACGATTTCGCTGCTGTGAGAAAGGAGAT TCAAGATGAAACCGATAGAGAGACTGGACGATCGAGAATGATTTCAAGTGTCCCGATTCACCTTAGTATATATTCTCCTA ATGTTGTTAACTTGACACTCATTGATCTTCCTGGCCTTACAAAGGTAGCTGTAGAGGGTCAACCAGATAGTATTGTCCAT GACATTGAGGATATGGTTCGGTCCTATATTGAGAAGCCAAACTGTATAATTTTGGCTATTACACCTGCCAATCAAGATCT TGCAACATCTGATGCAATTAAAATCTCGCGCGAAGTAGACCCCAATGGTGAAAGGACAATTGGAGTTTTGACAAAGATTG ATCTTATGGACAAGGGTACTGATGCTGTTGACATGTTGGAGGGGAGAGCTTATAAGCTAAAGTTTCCCTGGATCGGTGTA GTCAATAGATCACAAGCAGATATTAACAAGAATGTTGACATGATTGCTGCTAGGCGTAGCGAACGTGACTATTTTTCTAA TACCCCTGAATATAGACACCTGGCTCACAGAATGGGTTCCGAGCACCTTGCAAAGATGCTTTCAAAGCATTTGGAGACAG TAATCCAGTCCAAAATTCCAGGCATTCAATCTCTTATTAATAAAACAATTGCTGAACTTGAAGCTGAACTGAGTCGTTTG GGAAAGCCTATTGCAGCTGAAGATGGGGGCAAGTTGTATGCAATCATGGAAATATGTCGCTCATTTGATCAAATATTTAA AGATCATCTTGATGGCGTGAGACCTGGAGGTGATAAAATTTATAATGTCTTTGACAATCAGCTCCCTGCTGCTTTGAAAA GGTTGCAGTTTGATAAGCAGCTCTCAATGGAAAATATAAGGAAACTTATTACTGAAGCTGATGGGTATCAACCTCATCTA ATAGCTCCAGAACAAGGATATCGTCGCCTCATTGAATCTACTCTTACTACTATCAGGGGTCCTGCTGAGGCAGCTGTTGA TACGGTTCATTCACTATTAAAGGACCTGGTTCACAAAGCTATTAGTGAGACTCTGGAATTGAAGCAATATCCTGGTCTGC GGGCTGAGGTTGGAAGTGCAGCTATTGATTCACTAGATAGAATGAGGGAGGAAAGCAAAAAAGCAACACTACAGCTAGTT GATATGGAGTGTGGTTATTTGACAGTTGATTTCTTTCGGAAGCTTCCTCACGATGTTGATAAGGGGGGCAATCCTACACA TTCACTTTTTGATAGATATAACGATTCATATCTTAGGCGAATTGGAACCACGGTTTTGTCTTATGTCCATATGGTCTGTG CTACTCTGCGGCATTCAATTCCCAAGTCAATCGTGTATTGTCAAGTGCGGGAAGCCAAAAGAAGCCTGCTTGATCACTTT TTCACTGAGATAGGCAAAATTGAGGTGAGAGTAATAGCATGTTTGGAAAAAATCCCAAGCGTTTGTCCTCATTGCTGA
Protein sequence (LotjaGi2g1v0442100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MENLISLVNKIQRACTALGDHGEATALPTLWDSLPAIAVVGGQSSGKSSVLESVVGKDFLPRGSGIVTRRPLVLQLQKIE EGSREYGEFLHLPKKKFYDFAAVRKEIQDETDRETGRSRMISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVH DIEDMVRSYIEKPNCIILAITPANQDLATSDAIKISREVDPNGERTIGVLTKIDLMDKGTDAVDMLEGRAYKLKFPWIGV VNRSQADINKNVDMIAARRSERDYFSNTPEYRHLAHRMGSEHLAKMLSKHLETVIQSKIPGIQSLINKTIAELEAELSRL GKPIAAEDGGKLYAIMEICRSFDQIFKDHLDGVRPGGDKIYNVFDNQLPAALKRLQFDKQLSMENIRKLITEADGYQPHL IAPEQGYRRLIESTLTTIRGPAEAAVDTVHSLLKDLVHKAISETLELKQYPGLRAEVGSAAIDSLDRMREESKKATLQLV DMECGYLTVDFFRKLPHDVDKGGNPTHSLFDRYNDSYLRRIGTTVLSYVHMVCATLRHSIPKSIVYCQVREAKRSLLDHF FTEIGKIEVRVIACLEKIPSVCPHC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 575 | 575 | 0.0 | – | |
SMART | 1 | 251 | 251 | 2.4E-116 | ||
PANTHER | 1 | 575 | 575 | 0.0 | ||
Gene3D | 2 | 319 | 318 | 4.2E-119 | – | |
SUPERFAMILY | 8 | 308 | 301 | 4.69E-72 | ||
ProSiteProfiles | 31 | 300 | 270 | 59.045 | ||
CDD | 33 | 300 | 268 | 1.01351E-131 | ||
PRINTS | 34 | 52 | 19 | 5.3E-61 | ||
Pfam | 37 | 213 | 177 | 4.6E-55 | ||
PRINTS | 59 | 76 | 18 | 5.3E-61 | ||
ProSitePatterns | 60 | 69 | 10 | - | ||
PRINTS | 132 | 149 | 18 | 5.3E-61 | ||
PRINTS | 182 | 200 | 19 | 5.3E-61 | ||
PRINTS | 201 | 217 | 17 | 5.3E-61 | ||
Pfam | 222 | 488 | 267 | 7.2E-66 | ||
PRINTS | 224 | 243 | 20 | 5.3E-61 | ||
Gene3D | 326 | 570 | 245 | 5.4E-49 | – | |
SMART | 513 | 581 | 69 | 8.0E-4 | ||
Pfam | 514 | 566 | 53 | 5.8E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi2g1v0442100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…