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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0442100 |
| Transcript ID | LotjaGi2g1v0442100.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Dynamin-like family protein; TAIR: AT5G42080.1 dynamin-like protein; Swiss-Prot: sp|Q39828|SDL5A_SOYBN Dynamin-related protein 5A; TrEMBL-Plants: tr|A0A151SCZ5|A0A151SCZ5_CAJCA Dynamin-related protein 5A; Found in the gene: LotjaGi2g1v0442100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:93807910..93813475) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAGAACCTAATCTCTTTAGTCAACAAAATCCAGAGGGCTTGCACCGCTCTCGGCGACCACGGCGAAGCCACCGCCTT ACCCACTCTCTGGGACTCTCTCCCCGCCATCGCCGTCGTCGGTGGCCAGGTACCGTTATTTCTCAACTAATCAATAACTA ACTTCCTTTTCATTCACACTGATTCCATTCAATTCCACCTTCTTTCAGAGCTCTGGAAAATCCTCAGTGCTTGAAAGCGT TGTTGGCAAGGATTTCCTACCTCGTGGTTCAGGTAATTGATTCTAACACCCACATCTGTCATAGCCAAGAATTTGGTTGC ATGTTTTGAGAAATTGATGAGGTGCATGCAATTTTGTTGCAGGAATTGTTACCCGGCGACCCCTTGTTTTGCAGCTTCAA AAAATTGAAGAGGGTAGCAGAGAGTATGGTGAATTTCTACACCTTCCCAAGAAAAAATTCTACGATTTCGGTACTTTCCT TTCCTCAATTCCAACTCCTATAATTCCTTATGTTTGCTCATAACTGGTCACCCCAATTTTTATTTTTGTGTTGTTGAAAT TTCAATGATGATTTTATTTTGGTTTTGAAGTGATACAATTTAATTTGTTATGTGCAGCTGCTGTGAGAAAGGAGATTCAA GATGAAACCGATAGAGAGACTGGACGATCGAGAATGATTTCAAGTGTCCCGATTCACCTTAGTATATATTCTCCTAATGG TGTGTTTCAATACTAGCTTACATTACTATTTTATGTAATTTTTTTTACTTGGCTTATTTTGTATGCAAATTTTCAACTTA CCAAGACCCCTTTGACCTTTGCAGTTGTTAACTTGACACTCATTGATCTTCCTGGCCTTACAAAGGTAGCTGTAGGTAAG TATCAAGCTGGACATGTTTTTCTTGTCCTTGGTTTTGTGACAACTCTGTCCGAATTGTTAAATTATTGTTCTGGGGGTTT GGAAATGGAGAGTGATATGCTAACAACAGATGGTTTTGCAAAATACAGAGGGTCAACCAGATAGTATTGTCCATGACATT GAGGATATGGTTCGGTCCTATATTGAGAAGGTAGTGCCCTGTCTCTAATAGCACTCTTGAGGAACCGGTTTTGCAAGACA ACATACTTCATATATTTTCCGTGCCACTACTTGTATGATATGATTCTGTAGTCTTAATTTGCATTTCTAGAAAAATTGAT CTTGCAAAGTTGGCCGATTGTGCAAATATCTGGCTGTATTTAATTTGTATAAACTCAGTAGGTTTTTCAACAACTGAGGA AAATGCTTATATAATATTTCTTAATGGACATAGTTATAATGATTTCTACATTTGACGAAATGTGATATGTTGATTTAATG TTAATATGCAGCCAAACTGTATAATTTTGGCTATTACACCTGCCAATCAAGATCTTGCAACATCTGATGCAATTAAAATC TCGCGCGAAGTAGACCCCAATGGTAATTTCATTATTTTGTTTCTGTAGGCGTCAATTACTCTTTATGTTATGTCATTTAA CAGTTTTTCATTGGTTTCAAAAACCGGTGAATTAGAAAATGTATATTCCACTGTGATTCTGACAGAGTGACAGTTGAAGA ACTTTATTGATTTGAACACCTAGAAGGATGTAGTCTGCTCCTGTTCTAATTCTTTGGTTCTCGATTTCAATTTCCAGGTG AAAGGACAATTGGAGTTTTGACAAAGATTGATCTTATGGACAAGGGTACTGATGCTGTTGACGTGAGTCAATCTTATTTT TAGTTATGAGAGGACAACGATGCAATCGGTTGATGATAGTTCATTTATTGTCATACTTTGAAACTATTGAAAGCTGTTTG AAATTTTTCGTGCTTGTCCTGTTATATTGAAATACTGAAATCAAACACCTCCCTTCTAAGGTTTTGCTATTAGTTTCCCT TTTTCTTAAGATTGGTCATCATTTAATGGATGCTGAAGAGAGAAGCAAGAATACTAATTATTAATTGCTAGAACTGACAG TGACATTTTCATTATGGATGGAACCTCTTTCTAAGCAGGAGCAGTGTGCATTATATTCCAATAGATGATGATTGTCATAT AAACTCCCCACTCCCCCCCATTCTATCAAAGAGATAATTTATGGATGAGATGACTGAGCATATTTCGTTACCTTGTTAAA GAGAGCAAACTTATCAAGAAATTGATCTTTATATAAGAACGTGGTTGATTTCAAACAGTTAAATCTAGTTTTTGTTGTAG AGATTAGCTTGTTTAAGTTTTGATTGAAAAAGAAATTAACAGTTCCATAGTAGATTATTGAAATGGAAGGTCGATATAGT CCATACTGCTGAAGGTATCTTGTGTTTTAAGGCATTCTTTCTGCTGAAGAATTTAGCTTACTTAAGTTACATTTTTTTTC ATTCTATGACGTGAACCTGAATAACAGGCACTCTCAGTGCTGCGAAACGTAGCTACTTGATTCAGTACTGAGATCTCTAT TACATATATTTTTTATTACTTCAGATGTTGGAGGGGAGAGCTTATAAGCTAAAGTTTCCCTGGATCGGTGTAGTCAATAG ATCACAAGCAGATATTAACAAGAATGTTGACATGATTGCTGCTAGGCGTAGCGAACGTGACTATTTTTCTAATACCCCTG AATATAGACACCTGGCTCACAGAATGGGTTCCGAGCACCTTGCAAAGATGCTTTCAAAGGTACAGAAATAACGATTGAAT GTAATATAAATTTTTCATTTATAATTATTGTTATTATATTGTGTCACTTGTTTCTATGACTAAATTGTAATGCTTTTCTC AGCATTTGGAGACAGTAATCCAGTCCAAAATTCCAGGCATTCAATCTCTTATTAATAAAACAATTGCTGAACTTGAAGCT GAACTGAGTCGTTTGGGAAAGCCTATTGCAGCTGAAGATGGGGTAATTTTTCTCTTCAAAGCACAGCCAATTTGAATTTT AAGTATCAATTCATAAATCTTTGATTATTATATGGGTTCACTGTTGAATAAGGCCTTTTATTTCCACCCTTCTATTCTCG TGTATGTGATTAATGAATATCCATTCCAACAATTAATCATTGAATTTTCTAATGAATGATTGCAAATTACATGCAGGGCA AGTTGTATGCAATCATGGAAATATGTCGCTCATTTGATCAAATATTTAAAGATCATCTTGATGGCGTGTATGTGTTTCCT TTCTTTGTGTTTATAAATTTTTAAATAATTCAGTTCCTATTTTCTTTGTTTCACTATCCTTGTACTCGATTCATTTTTTC AAACTAACTTCAATTATTTGTCAATCTCCTACAGGAGACCTGGAGGTGATAAAATTTATAATGTCTTTGACAATCAGCTC CCTGCTGCTTTGAAAAGGTTGCAGTTTGATAAGCAGCTCTCAATGGAAAATATAAGGAAACTTATTACTGAAGCTGATGG GTATCAACCTCATCTAATAGCTCCAGAACAAGGATATCGTCGCCTCATTGAATCTACTCTTACTACTATCAGGGGTCCTG CTGAGGCAGCTGTTGATACGGTACATTGAAATTGGAGAATAGTAATACAAAAGTTGTTGTTATTAAGTGCCTTAATTTGA TGTCCCCGTTGCTCATAGAAAGTCATTTAAATTCTATTTTAAAATTGTTATTTCATATTCACAGTCATGTGTACCTCTTT CTGGTTCTGGTCTCCATTCCAGTCTGAAATGCTTTTGAAACTTAATTGGATTACATTTTCTATTACCATCAATAAATGGT ATCCATGGAATAATAATCCACAGTAATTAGAAGTTCACCACTGATATCACTCCTCTTAATGGAATTTTTTTTGTTCCCAA AAGCATGTTGTGAGATCTTGTGTTGAAGAAATTACATGGTGAGATAACATACTAAAGTGCACCCCTTTTTATTGTAATTC TAATTGATAAGTTGGCCTTCTTTCTGATTAAAAAAACCTTACCACCATCCTCCACCTTGTTAAAATACCTTTAAGATGGG AAAATTTACCAATTTAGTTTTTTATTTATTATGTATTTTTGTTATAGGTAATTGAACGTTTAACCTTTGCTGTTCTCATC CTTTATATTTATTAACAGCATTTTGAATTGTATGCCACCAGGTTCATTCACTATTAAAGGACCTGGTTCACAAAGCTATT AGTGAGACTCTGGTATGATTCTGACAATACTAAAATTTAGTGTTTCTATTGTACTAATTTCTTGCTGTTGTGTTTCAGAC TAAATAGGTTTTGTACTTAAGACGCTGTTATTTTGTCATGTTTATTCTAGTGAGACAGGGTTCATTTTGCAATATCACTT AAATCTTCAAACGTGAAGCTTAAAAAAATAAATGTTTTGAGGGGTAATAAAATTGCCTAGATGCTGGTGTACATAACCTC TCTACTTGTAAAACAGCTGAAATAGTAGAAAGATCTTCAAGGTTTTTTTTATTTTTTTTTATCAAAGACCACTGTTTGGT CAACCTGTCATGCAATAGGAAACGCTTCTAAATAAATCACCACAATTTTTATTTTTCTGATTTGATGCATAGTCGTGTTT CTGCAACAAAGAACCTTGTGTTAGAAGGAGCTGATTTGTAGTGTGGGGCAATAACCTTGTGGACTCTCTGTTCCCTCATT GCTTGCAATCTCTTTCTTCTATCCCTTTATCCTATGTTATCTGCGGTTCCCCTTGTACTCTCCCAACTAATATACTCGTG GCCTGACTAACAGGAATTGAAGCAATATCCTGGTCTGCGGGCTGAGGTTGGAAGTGCAGCTATTGATTCACTAGATAGAA TGAGGGAGGAAAGCAAAAAAGCAACACTACAGCTAGTTGATATGGAGTGTGGTTATTTGACAGTTGATTTCTTTCGGAAG CTTCCTCACGATGTTGATAAGGGGGGCAATCCTACACATTCACTTTTTGATAGATATAACGATTCATATCTTAGGCGAAT TGGTAAGTTTTACAAAATACAGTTTCAAACTTGACTCAAATCATACTTTCTTCTTACTGGTTGCAATTTGTTGAAAATGT TAATGAATAGAGAGATACTAACGCTCTCCCTGTAAACAGGAACCACGGTTTTGTCTTATGTCCATATGGTCTGTGCTACT CTGCGGCATTCAATTCCCAAGTCAATCGTGTATTGTCAAGTGCGGGAAGCCAAAAGAAGCCTGCTTGATCACTTTTTCAC TGAGATAGGCAAAATTGAGGTGAGAGTAATAGCATGTTTGGAAAAAATGCACATTCACAAGCTGCTGAGAGTAGTTTTTC TCATATTTACGCTATTATAGGGTAAAACAAATATGCAGTAAATCTGTCTTTCCTGGTTTCTCATATTTACTCAAGCTTTT GTTTGTGTATATTAGTTTTATATTCTGGCCTATTTTCGTTTAGTTTTCAGTTAGCCTGAACACATGTCTATTTGTAGCCC AAGCGTTTGTCCTCATTGCTGAATGAGGATCCTGCAGTCATGGAACGACGCGGTGCCCTTGCAAAGAGGCTTGAGTTATA CCGGAGTGCGCAAGATGAGATTGATGCAGTTGCTTGGTCTAAGTAG
CDS sequence (LotjaGi2g1v0442100.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAACCTAATCTCTTTAGTCAACAAAATCCAGAGGGCTTGCACCGCTCTCGGCGACCACGGCGAAGCCACCGCCTT ACCCACTCTCTGGGACTCTCTCCCCGCCATCGCCGTCGTCGGTGGCCAGAGCTCTGGAAAATCCTCAGTGCTTGAAAGCG TTGTTGGCAAGGATTTCCTACCTCGTGGTTCAGGAATTGTTACCCGGCGACCCCTTGTTTTGCAGCTTCAAAAAATTGAA GAGGGTAGCAGAGAGTATGGTGAATTTCTACACCTTCCCAAGAAAAAATTCTACGATTTCGCTGCTGTGAGAAAGGAGAT TCAAGATGAAACCGATAGAGAGACTGGACGATCGAGAATGATTTCAAGTGTCCCGATTCACCTTAGTATATATTCTCCTA ATGTTGTTAACTTGACACTCATTGATCTTCCTGGCCTTACAAAGGTAGCTGTAGAGGGTCAACCAGATAGTATTGTCCAT GACATTGAGGATATGGTTCGGTCCTATATTGAGAAGCCAAACTGTATAATTTTGGCTATTACACCTGCCAATCAAGATCT TGCAACATCTGATGCAATTAAAATCTCGCGCGAAGTAGACCCCAATGGTGAAAGGACAATTGGAGTTTTGACAAAGATTG ATCTTATGGACAAGGGTACTGATGCACTCTCAGTGCTGCGAAACATGTTGGAGGGGAGAGCTTATAAGCTAAAGTTTCCC TGGATCGGTGTAGTCAATAGATCACAAGCAGATATTAACAAGAATGTTGACATGATTGCTGCTAGGCGTAGCGAACGTGA CTATTTTTCTAATACCCCTGAATATAGACACCTGGCTCACAGAATGGGTTCCGAGCACCTTGCAAAGATGCTTTCAAAGC ATTTGGAGACAGTAATCCAGTCCAAAATTCCAGGCATTCAATCTCTTATTAATAAAACAATTGCTGAACTTGAAGCTGAA CTGAGTCGTTTGGGAAAGCCTATTGCAGCTGAAGATGGGGGCAAGTTGTATGCAATCATGGAAATATGTCGCTCATTTGA TCAAATATTTAAAGATCATCTTGATGGCGTGAGACCTGGAGGTGATAAAATTTATAATGTCTTTGACAATCAGCTCCCTG CTGCTTTGAAAAGGTTGCAGTTTGATAAGCAGCTCTCAATGGAAAATATAAGGAAACTTATTACTGAAGCTGATGGGTAT CAACCTCATCTAATAGCTCCAGAACAAGGATATCGTCGCCTCATTGAATCTACTCTTACTACTATCAGGGGTCCTGCTGA GGCAGCTGTTGATACGGTTCATTCACTATTAAAGGACCTGGTTCACAAAGCTATTAGTGAGACTCTGGAATTGAAGCAAT ATCCTGGTCTGCGGGCTGAGGTTGGAAGTGCAGCTATTGATTCACTAGATAGAATGAGGGAGGAAAGCAAAAAAGCAACA CTACAGCTAGTTGATATGGAGTGTGGTTATTTGACAGTTGATTTCTTTCGGAAGCTTCCTCACGATGTTGATAAGGGGGG CAATCCTACACATTCACTTTTTGATAGATATAACGATTCATATCTTAGGCGAATTGGAACCACGGTTTTGTCTTATGTCC ATATGGTCTGTGCTACTCTGCGGCATTCAATTCCCAAGTCAATCGTGTATTGTCAAGTGCGGGAAGCCAAAAGAAGCCTG CTTGATCACTTTTTCACTGAGATAGGCAAAATTGAGCCCAAGCGTTTGTCCTCATTGCTGAATGAGGATCCTGCAGTCAT GGAACGACGCGGTGCCCTTGCAAAGAGGCTTGAGTTATACCGGAGTGCGCAAGATGAGATTGATGCAGTTGCTTGGTCTA AGTAG
Protein sequence (LotjaGi2g1v0442100.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MENLISLVNKIQRACTALGDHGEATALPTLWDSLPAIAVVGGQSSGKSSVLESVVGKDFLPRGSGIVTRRPLVLQLQKIE EGSREYGEFLHLPKKKFYDFAAVRKEIQDETDRETGRSRMISSVPIHLSIYSPNVVNLTLIDLPGLTKVAVEGQPDSIVH DIEDMVRSYIEKPNCIILAITPANQDLATSDAIKISREVDPNGERTIGVLTKIDLMDKGTDALSVLRNMLEGRAYKLKFP WIGVVNRSQADINKNVDMIAARRSERDYFSNTPEYRHLAHRMGSEHLAKMLSKHLETVIQSKIPGIQSLINKTIAELEAE LSRLGKPIAAEDGGKLYAIMEICRSFDQIFKDHLDGVRPGGDKIYNVFDNQLPAALKRLQFDKQLSMENIRKLITEADGY QPHLIAPEQGYRRLIESTLTTIRGPAEAAVDTVHSLLKDLVHKAISETLELKQYPGLRAEVGSAAIDSLDRMREESKKAT LQLVDMECGYLTVDFFRKLPHDVDKGGNPTHSLFDRYNDSYLRRIGTTVLSYVHMVCATLRHSIPKSIVYCQVREAKRSL LDHFFTEIGKIEPKRLSSLLNEDPAVMERRGALAKRLELYRSAQDEIDAVAWSK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 614 | 614 | 0.0 | – | |
| PANTHER | 1 | 614 | 614 | 0.0 | ||
| SMART | 1 | 255 | 255 | 5.5E-115 | ||
| Gene3D | 2 | 323 | 322 | 2.1E-117 | – | |
| SUPERFAMILY | 8 | 312 | 305 | 9.38E-71 | ||
| ProSiteProfiles | 31 | 304 | 274 | 60.823 | ||
| CDD | 33 | 304 | 272 | 4.55794E-132 | ||
| PRINTS | 34 | 52 | 19 | 1.6E-53 | ||
| Pfam | 37 | 213 | 177 | 5.0E-55 | ||
| PRINTS | 59 | 76 | 18 | 1.6E-53 | ||
| ProSitePatterns | 60 | 69 | 10 | - | ||
| PRINTS | 132 | 149 | 18 | 1.6E-53 | ||
| PRINTS | 182 | 200 | 19 | 1.6E-53 | ||
| PRINTS | 201 | 217 | 17 | 1.6E-53 | ||
| Pfam | 227 | 492 | 266 | 5.3E-65 | ||
| Gene3D | 330 | 580 | 251 | 4.8E-49 | – | |
| SMART | 517 | 610 | 94 | 2.3E-34 | ||
| Pfam | 518 | 610 | 93 | 1.2E-20 | ||
| ProSiteProfiles | 522 | 614 | 93 | 18.418 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi2g1v0442100.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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