Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0458600 |
| Transcript ID | LotjaGi2g1v0458600.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein kinase; TAIR: AT4G23180.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 10; Swiss-Prot: sp|Q8GYA4|CRK10_ARATH Cysteine-rich receptor-like protein kinase 10; TrEMBL-Plants: tr|G7K104|G7K104_MEDTR Cysteine-rich receptor-kinase-like protein; Found in the gene: LotjaGi2g1v0458600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:95215945..95219857) extracted from Lotus japonicus Gifu genome v1.2.
ACTTTGTGCATTGTCCACGCTTCAAGCCTAAGGGCTTCTGCCTGAGGAGACGCGTTAGAAATTATTCATGTGTCATTTAT ACAGCAGTTTAAACTTTGGGGATAATTGGATCCTGACAGGTGCAGCAGTGAAGATGCAATGATATGGTATGAGTTTTGCC AAGTTCGGTACTCCTTTCAGATGTTTTTCTCACGCTCAGTTTATACTGGAAAATATCCACAGCAGAATGATCAGGAGAAG AATGTCTCAGATCCTATTCGATTTGAACAACACGTGACTTATTTAATGAACAATCTCTCAGATGAAGCTGCTTTTAATCC TGCCAAAAACATGTTTGCAGCTGGGGAAATTAGGTCTCCAGGGAAAAGGACAATAGTTTATGGGCTTGTCCAATGTACCA GGGACATGTCTGGAACAGACTGCAGTAGTTGTTTAAGTTCTGCATTAACAGAACTTACAACATGCTGCTCGAGAAGAGAA GGAGGGATTATTGTCAGTAGAAATTGCAATGTTAGGTTTGATTTGTCCAAGTTCTTCAACACTTCATCAGCATACTTGTT GACTTATCCAACATCCAAAGGTATAGTAAGGCTTTTCCATCTGAAAATGTGTGTGTGTGTGTTTGTATTTCAAGAAGGAA CTAATATAAGCTTCTCTTGATTTACAAGGAGGAGGGAAATGGAAGCCCTGGATGTTTGTGTTGACTATATGTGGCTCAAT TTTAATATTAGCAGTTGTTGTTGGGTTGTGCACTGCTTGCCTCAGGAGAAGAAATGATAGAGACAGAGGTAAACTTCTAT AATTGAAATCCATTAGCTATATTCATAAGAACATATCAGAACTCAGTTCTATTTTACTTAAATATGAAATGAATCAGATG AAGAAAAGAGTGAAAGGATGATATTGCAAGATTTAGTTAGCCCCAGACATGTAGCAATTACCCAAGAAGGTGAGTTGATT AGTTCTGATGAAATGTTGTTCATGACCTTAGCAACCATTAAAGCAGCTACTGGTGACTTTTCTGATAGAAATAAGCTGGG ACAAGGAGGGTTTGGTGAAGTATACAAGGTCATACACTCATGCATTTCACTAAAATAAAATTCCTTTTGGGATGTGTACT TGTAGGGCCTAGTTAACATGTTTGATTTCGTTGCAGGGTGTTCTGTCAGATGGTAATGAAATTGCAGTAAAAAGATTATC AAGGAAGTCTTGGCAAGGCATGGAGGAATTCAAAAATGAGATCATGCTCATTGCCAAACTTCAACACAGGAATCTGGTGA GGCTGTTGGGTTGTGTCTTGGAGGGAGACGAAAGAATGCTTGTATATGAGTTCATGTCAAACAAAAGCCTTGATCAATTT ATCTTTGGTTTGTTCTGTTGCTCACTTTTCAATTTTCATAAAGCCTTCTACATGTATCTTATATTTGGCTCTTGTTCTTT GTAATTCAAGATGCAGGAAAACGTCCCAGACTTGATTGGAAAACATGCCAAGGTATTATCAATGGCATAGCCAGAGGACT AGTTTATCTTCACGAGGAGTCTCGCCTTAAAATCATTCACCGAGACCTAAAGCCAAATAATGTGTTGCTAGATCATGAAC TGGTTGCTAAAATATCAGATTTTGGCATGGCCAGGATATTTTCTGAGAATCAGAATGCAGCTAATACCAAAAGAGTTGTG GGAACATAGTAAGCCAACTTCCACTCACCCATCTTTTATTTCCCCTTTTAGTATTTTTATTCCAGATTATTTTCCATTAA CTTGACTATGAATCCTGATGTATAAAACAGTGGATATATGGCTCCAGAGTATGCAATGGAGGGATTGTTCTCTGTAAAAT CTGATGTCTTCAGCTTTGGTGTTATCTTGCTTGAAATCATTAGTGGGAAAAGAAATAACGGCTTTTACTTAACCGAACTT GCCCCAACACTTCTTGCACATGTAATTTCATCAACCAAACACTTGATTCAAGTCAGTAAATCTTCAAAATACATAATTCT GTTTATTCAAATTGTGACAGGCGTGGCAGCTGTGGAATGAAGGAAAAGAATCGGAATTTGTGGATCCCTTGTTACGGGAA TCATGTCTTGCTTCTGAACCTGAAGTTCTGAGGTGCGTGCACATTGGACTTCTGTGCGTGCAGCAAGATCCAGAAGACAG ACCCACCATGTCAGATGTGGTGGCTCTCCTGGGAAGTGAATCAACGGTTCTTCCCCAACCAAGCAAACCATCTTTTCCTT TGCGTAGGGTGCATCATGTAGATCCATCAGCATCAACAAATCCTTCAGTGAGTGAGATGATGTGGTCTAGTGTTTTGCCA CGATGATTGATCTTGTGACAATAGAGGGGTGCTAGCATTTTAATTACCACAACATTCTTGACAGTAGCATAGATAGAAAC TAGAACAGACATGCTTTTATGGGTAGTAACACACCATGACCATACCATATATATACTCGTGTGGGGAAATCATGTTATAA TAAGATCCCAACTCAAGGCTTGTCTACTTGAAAGAAATCAAATGTGACACACGTTGAATCTTTTACATTTTCTTATTGAT GAATCTTTTACATTTTCTTATTGATGACAACCTTGACTCATGTTGCTTGAAGATGCAATCTTGGATTGAATCTCACTTAC GAAACATATTAGGATTACACTTAAATAAGAATTCAAAATTCCACAGCAGGGTTCGCTGAAGAACTTTGGGTTGCGGTTTT TATCGTTGTCACCAGCTTCCAAATGTTTAATGGAAGGAGCACATGCTCCCATGTCACAAAAAATCACTTCCCTCGACGAG AACTAACATAAAAAAATAATAATAATAAACCACCAATCATTAACAATATAGTCTTGAAAAGGTTTTTTGTTAAAAAATAA ATAAATCTACATGAGCTTCACTTGAGATCTCTTAAAGAAGATACGGTCATAGTGATCAATCTGCTGTTAAATGGATCAAT GAGCTAAGAGGCTTTCTTGGGAGGAGACATGTTAAAAATAAGGGAAAGAACTGCTTTGGTGGTACAAATCTTGAACAACA ATAGAGTGAGCAGATATAACAGCAAACCTGCGAGAGGTAAAAGATCGGTTAATACTACAAATTACAACAATTACAAGACC AATTCGCACAACATGAACAAAATATTTAAAAATAAAACTCACCAGCTTGAAGACCACTAAAACCAGTGGCATCAAACCTC CTAGTTTCTGAAAAGCTAAAATCCCAGATAGCCTGCAGGAGTTCAATGCAATCATAAGGGAATTTCAAAAGAGAACTTCC ACTTGTATACATGTGTGTTTGGTTCCCCATTAGGGAACCTCAGAATCAATTATGATAGAGTAAAATGAATGAAATCACCT TTGGATAACAATATAGACGTTAGGAATCATTTTGGAAGCTAGAGAGAGAAGCTTTTGCATTATCACAACACAACTAGATT TCACAACATTACTCTACAAAATAACTTTTTTCATAAATGTATCCAAACATAAATTACTCCACTTTCAGCTCACTTTTACT ATAATCAATCTAACCAAAATCAATTTTATCCAAAATCAATTGTGACAACGCTGATCCGAACACGCACGTAGTACACATGC GACGCACTTGACACTTTATGCATTGCATATACGTAACGTAGCTGTACTACAAATGAAGATATACCCATAATAGAAGTATA AAACCTCAAAACTTGTACTGATGTACTCGCCTACAGTGCCAAGTTTATGCTTCAATATTTAGTAAAGTAAGAGGCTTAGG TTGAGGATTGTCAAGGGGCAGAGTAACAGGCTTATAGCAGGAATAAATGGTAGAAACATTACAACAAATCAAAACTGAAC ACTGAAGCACAAGATCTCTTTGTGCAGGTAGACCCCAGAAAACCAAAATCTATTACAAAAGAGAAATTTAAAC
CDS sequence (LotjaGi2g1v0458600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTGTGTTGACTATATGTGGCTCAATTTTAATATTAGCAGTTGTTGTTGGGTTGTGCACTGCTTGCCTCAGGAGAAG AAATGATAGAGACAGAGCAACCATTAAAGCAGCTACTGGTGACTTTTCTGATAGAAATAAGCTGGGACAAGGAGGGTTTG GTGAAGTATACAAGGGTGTTCTGTCAGATGGTAATGAAATTGCAGTAAAAAGATTATCAAGGAAGTCTTGGCAAGGCATG GAGGAATTCAAAAATGAGATCATGCTCATTGCCAAACTTCAACACAGGAATCTGGTGAGGCTGTTGGGTTGTGTCTTGGA GGGAGACGAAAGAATGCTTGTATATGAGTTCATGTCAAACAAAAGCCTTGATCAATTTATCTTTGATGCAGGAAAACGTC CCAGACTTGATTGGAAAACATGCCAAGGTATTATCAATGGCATAGCCAGAGGACTAGTTTATCTTCACGAGGAGTCTCGC CTTAAAATCATTCACCGAGACCTAAAGCCAAATAATGTGTTGCTAGATCATGAACTGGTTGCTAAAATATCAGATTTTGG CATGGCCAGGATATTTTCTGAGAATCAGAATGCAGCTAATACCAAAAGAGTTGTGGGAACATATGGATATATGGCTCCAG AGTATGCAATGGAGGGATTGTTCTCTGTAAAATCTGATGTCTTCAGCTTTGGTGTTATCTTGCTTGAAATCATTAGTGGG AAAAGAAATAACGGCTTTTACTTAACCGAACTTGCCCCAACACTTCTTGCACATGCGTGGCAGCTGTGGAATGAAGGAAA AGAATCGGAATTTGTGGATCCCTTGTTACGGGAATCATGTCTTGCTTCTGAACCTGAAGTTCTGAGGTGCGTGCACATTG GACTTCTGTGCGTGCAGCAAGATCCAGAAGACAGACCCACCATGTCAGATGTGGTGGCTCTCCTGGGAAGTGAATCAACG GTTCTTCCCCAACCAAGCAAACCATCTTTTCCTTTGCGTAGGGTGCATCATGTAGATCCATCAGCATCAACAAATCCTTC AGTGAGTGAGATGATGTGGTCTAGTGTTTTGCCACGATGA
Protein sequence (LotjaGi2g1v0458600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFVLTICGSILILAVVVGLCTACLRRRNDRDRATIKAATGDFSDRNKLGQGGFGEVYKGVLSDGNEIAVKRLSRKSWQGM EEFKNEIMLIAKLQHRNLVRLLGCVLEGDERMLVYEFMSNKSLDQFIFDAGKRPRLDWKTCQGIINGIARGLVYLHEESR LKIIHRDLKPNNVLLDHELVAKISDFGMARIFSENQNAANTKRVVGTYGYMAPEYAMEGLFSVKSDVFSFGVILLEIISG KRNNGFYLTELAPTLLAHAWQLWNEGKESEFVDPLLRESCLASEPEVLRCVHIGLLCVQQDPEDRPTMSDVVALLGSEST VLPQPSKPSFPLRRVHHVDPSASTNPSVSEMMWSSVLPR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 1 | 1 | - | – | |
| Phobius | 1 | 18 | 18 | - | – | |
| SignalP_EUK | 1 | 22 | 22 | - | – | |
| TMHMM | 2 | 24 | 23 | - | – | |
| Phobius | 2 | 13 | 12 | - | – | |
| Phobius | 14 | 18 | 5 | - | – | |
| Phobius | 19 | 359 | 341 | - | – | |
| Gene3D | 21 | 117 | 97 | 1.0E-35 | – | |
| PANTHER | 33 | 328 | 296 | 4.4E-131 | – | |
| SUPERFAMILY | 33 | 315 | 283 | 7.69E-85 | ||
| PANTHER | 33 | 328 | 296 | 4.4E-131 | – | |
| ProSiteProfiles | 42 | 322 | 281 | 40.782 | ||
| SMART | 42 | 322 | 281 | 2.5E-41 | ||
| Pfam | 46 | 314 | 269 | 5.1E-51 | ||
| ProSitePatterns | 48 | 70 | 23 | - | ||
| CDD | 48 | 315 | 268 | 3.61475E-98 | – | |
| Gene3D | 118 | 323 | 206 | 2.0E-60 | – | |
| ProSitePatterns | 163 | 175 | 13 | - | ||
| MobiDBLite | 324 | 359 | 36 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi2g1v0458600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…