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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0018300 |
| Transcript ID | LotjaGi3g1v0018300.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Homeobox leucine zipper protein; TAIR: AT1G79840.1 HD-ZIP IV family of homeobox-leucine zipper protein with lipid-binding START domain-containing protein; Swiss-Prot: sp|P46607|HGL2_ARATH Homeobox-leucine zipper protein GLABRA 2; TrEMBL-Plants: tr|A0A0L9UPL7|A0A0L9UPL7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0018300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:1913747..1922788) extracted from Lotus japonicus Gifu genome v1.2.
CTTAAATTGCCAGTACCTACGTCTCTATCCTCGTGCTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAAGTCT CACCCTCTCCATGTACAACAACACAACCATTTTAGCTCCTTAAAAAACACACTCTCACAACGTTGTCAATGGGTGCTGAC ATGTCGAACAATCCACCTCCAACTTCTCAAACCAAAGACTTATTTGCCTCTCCAGCTCTTTCTCTTAGCCTTGTAAAGTT TCTTCCATTTTCCTTTCCTTTTCTTTTGATTCTTCAATGCTTAATTTGTGCTTTCTTCATTTACTTTAAATGCTTTTGTC TTATCTTTTTCTCTGTTACTGGTATTGAAGGCTGGGATTTTTCGCCATGGCGGTGCGGCGGCGGAGGCTGAGGCTGCCAC TTCTCACATGGAGTTGGAGGATGGGGAGGAGGGGAGTGTTGGGATTGAGCGCCTTGAGGAGATTAGCAGTGAGACCTCAG GTATAAGTCTCGTGCTGAAACTCAACTTTTTTATTATAAATTTGAGAACACACTTGATTGTAGAGACTCAATTAATAACT TCAGCAAAAATTTCGGCGAACTCTGATGGACATCCCAACTGGCTATTTACCTTGGGGGCAAAAACGACAGTTGGAATGTA CACTGGAGTTCGTCAGAATTTTTGCTACAAGGTAGTGGTTTGCCACAATACAACGATATCAAGTTATACAAATGATTTTA TATTATATATCTAACAGGTCCCACAAGATCCAGATCAGAGGATGATTTTGGTGAAGGAGAAGGTGAGCACGAAGATGATG ACGGTGATGGAGACAAAGATAACAAGAAGAAGAAGAAGAGGAAGAAATATCACAGGCACACACTTGAGCAGATCAAAGAA ATGGAAGCGTGCGTAAAATCATCTCATTTTCTTAATTTTTCTTTGTACTCATGTATATGTGTAAATTATTTTGTCATGAG TCACCAATGAGTTTGGAATTTGGAGGATAATTAATATTGAATCATAGGTGAGCATTAAGCATTTCTATTTTATTGCATTT TTCTATTTGAGTTTTTGTCATCATACCAAACATAGTACTCTGATCATTATGTGTGTCTTCATTACTAGAGAGAGAGAGAC ATATGCTTATTGATTAAGGAATAAGGAACAGAAATTTGTATAAAAATATTGATTATCTGTGCATATATATGTTAGGTGCT AATTAAGTAAATGAGTAATCAGTCATGGATTTTGGGGTTACCAATCAAATGATTTCTTCCAAAGTTATATGATTTGCATT TGCCAGAATTACCTGTGAAGACTTTAATTCTTTAAAGCATAGGCTGCATATAAAGATGATGATTAAAAGCTAAAGATTAA AATATTGAACAGCTTTTGCTTTATTATATGCCCTGTGTAAAGCATCCCCACTTGATTATTAGTTTGTGGTATATATAGTA CTTATTTAAAATGTGCACATATCATGTTTGCATAATTAAACTCAACTTGTTGGACCACACTGCATTACAAAATTGGAAGC TTGTTGTTTTGTTAAAATACAAAATCAACAGAAAAAGGTGACATGAATGTCATCATGTTTGTAGGCTTTTCAAAGAGTCA CCACATCCTGATGAAAAGCAGAGACAACAACTTAGCAAGCAATTAGGCCTTGCTCCTAGGCAAGTCAAGTTCTGGTTCCA AAATCGTCGAACCCAGATCAAGGTAATTCAATTGAATCAATTTTAATGCAAATTTCCACTGTTTTTCTTCTGTGAAATGT GAATTTAACAATGACATTCATTGATTGGGTTTTGCAGGCAATACAAGAGCGTCATGAAAACTCATTGTTGAAGACAGAAA TTGATAAACTAAAGGAGAAAAATAAGAGCTTGAGAGAGATCATAAACAAAGCTTGCTGCCCCAATTGTGGGGTGCCCACT ACAAGCAGAGATGGTGCCATGCCAACTGAAGAACAACAACTACGCATTGAAAATGCCAAACTCAAAGCTGAGGTTTTTTT ATAAAACTATCTCCAACTACATTTCTGATTTTTTTTCTTACTACATGGTTATGGACATGTAATTCTATTAATACACTGCA ACATAAAATTTCTGGATCGGTCACTGTGTGCAGGTTGAGAAACTTCGAGGAGCTTTAGAAAAATACGCACCAGGGACAAC TTCCCCTTCATGTTCTTCTGGCCATCATGACCAAGAGAACAGAAGCTCTTTGGATTTTTACACTGGAATTTTTGGACTTG ATAAGTCAAGGATAATGGACATTGTAAACCAAGCAATGGAGGAGCTCATAAAGATGGCCACAGCAGGGGAACCGTTATGG CTGCGTAGCTTTGAGACCGGTCGCGAAATACTTAACTATGATGAGTATGTGAAGGAGTTTGCAGCTGAAAATTCCGAGAG TACTGGGCCAAAGAGATCCATCGAAGCCTCAAGAGAGACAGGGGCTGTTTTTGTTGATCTCCCAAGGCTTGTCCAAAGTT TTCTAGATGCTGTAAGACAACTTTTCCTACAAAAGCTACTCTTAATGTGTGTTTGGAAACTCTGATATATTTTCACCTTT AGGAGAGAAGTGAATATGATAGAAGCTTATGGAAGTAAAATTGATTTTGATAGTATCAAAAGTTAATCCAAACATCTTGA CAGCATGTTTGGATCAGGCGTAGGAGACTCAAAATCAATTCTTTTCCTCCAGAAGCTTCACTTATAGCATGTTTGGATGA ACTTTTTCTCTCTAAATCAATTATAACATCTAGAAGTTTGTCACATAAGATTTTTCACATAACATTAATGCACTTAGTAG TTTTTGCTCCAATGTGATTTTGAGGTAATGTGGAAACTCACTGCCAATCCAAACTGTAGCTCTTTTTTTTTGTCTTTGAC CCGGTGTCCTCAGCAGAAAATTGTAGTTGTTCATCCCAATAAATAATTTTTCCGATATTCATACTTGTGTCCTCGCTCTC ATATGAGCCTAGCTTGCTTACCACTAGATCGACCGTATCCAAATATTTACTGAATCACTTTTTCTCAAACGTGAAAATAA GTAACTCTATTCTGTATTAAAGGCCTCTTAAATTCAATTCATAATGTGGGTTGGAATGGATATATTTGAATGCATTTATT ATGCTTGTTGCAGAATCAATGGAAGGAAATGTTTCCGTGTTTGATATCCAAAGCAGCAACAGTTGACATCATATGCAATG GAGAAGGATCTAACAGGAACGGTGCAGTGCAACTGGTAAGGGGAATTACCACTGTGCTAGGTTTCTTTCATATTAAGTTT TCACTGGGCCTACTCAATGGACGGTTAGATTAAAGTTTAGGCGGTCCCACTATATCATTTAGTGCACGTTTGGTTACACT GTTGAAAACTACAGTGAAACTAAAATCACGATAGAAACAAGTTTTTGTAACTGTCCACTGTGATTTTCCATTGTATATCT AAACATGCACAGCGTAGTAACTCTTGGCATTTACCTCTGCTACATATCTTGTCCAAAAGGTACCCAAGTGGAATCTCTCT TTCCTAGTATTTTTGTTGTATATAAAAAAAATTTCCTCTGAAAGGAAAATACCCACTATCCATGAAAAATAGGCCTATGT TTTATACTTTAATAGCTTTTTATCCCATATACAATACTTGAAGATAACAAGACAAACCAACATGAATTGGTTGAAGTTCT TAGATGTGGACCTTGAAAGTTTCATCAAGGGAGTAGTTACTAAAGATAATGGTTAAATTGATCTCTTAAAGTGTTGGAGG TTGATAAGTACGTTTCTAAAAGCAAGAAATAGTCCCGCGGTCTTTGATTGTGTAAAATGTCGGCCGGTTACTAATTTGGC CGATGTTTTATGTGATCACATGGACTAACTTGATCGATGTTTTACACAATTAGGGACCACAAAGGTATTTTCTAAGTCGA GAGATGAACTTGTCGACACCTAATACTTTAAGAATCATTAGTGTCCAACACTTTCGATAACTATTTTGGCAATTCACTCA CTCGTATATAATTTGACACGATGAGGAGAACACTATATTAACTTTAATTTTGTTTTTGTACTTTTGGTGGATAACAACAA CCTTAATTGAATTTTGTTTTGGGTGATGGATACAGATGTTTGCTGAACTACAAATGCTCACACCAATGGTGCCCACAAGA GAGGTGTATTTTGTCAGGTACTGCAAACAATTGAGTGGTGAACAATGGGCAATCGTTGATGTATCCATAGACAAAGTAGA AGACAACATCGACGCTTCCCTCGTCAAATGCAGAAAACGCCCATCCGGTTGCATTATTGAGGACAAGTCAAATGGCCATT GCAAAGTATGTACAAATTTCATTAATTCTAAATTGCTCTTCATTTTTGTCACATCATTTTCAGCTTTATTTTCTAAAAAA AAACTTGGTTATTATAGTCTGTGCAAACGCTCCCAAACACATAGAAAAAACAATGTTTAAAAAATCGGATCAATCACTAA ACCGTTCGAGGCAACATTTCAATGTTCGAATTGTGGTCGAAGTGTCGAACTGTGGTTGTGACAAAAGCAATTAAATACTT TTTTAATATTATATACTATAATAGGTAATATAGTCACACAAGATATTAAGAAATTTATACTATTTAAATTTCAAATTATC ATAGAGTTTCATCTTATATAATTTAAATGATAAAAATTAAAAATGACTAATAAATAGTTACAAATATTTTTTAATATAAA AAAGCCCAAAAAATACTTGACCGCTTGAATCCGGTTTTTCAATACCAATTCTGGATCAGCTTTTACCTTTTTTTGGACTT GTTCGACCGGGTCTGACCGATTCTAAAATCAACCAGTTTTGACCGAATTGATCAAGAAACCAGTTCTCAATTGGATCAGC CGATCCGGTCTAGATTTCCAAACACTAAGAAAAACTAATTTATAAGAAGTTAACTTTTTTTCATTTCTTATATTTAGTTT TGAATTTAATTTATATGCATTGCGTAAAACATCTTAGTCACATTTCACAATGTTTCTCTTTTACTATTTTTAATTTTAAT CTATTTATGATATGAGAAAATCAGAAAACAGTGAATCATAAATGTTTGTGTAAAACTTTTTACACTATTATGAGAGCAAA GTTATTAAACTTAATTTTAATTATGAAAATATATTATTTTCACTTTACGTACTATATTTATTTCCTATACAAAGTTCCGA AACGAAACAAAGGGGCATTTTTGTTTTTTTTTATAGGTAATGTTAGTTGTTAGAAATGTCAATAAATTAATCCCTCATCC GGGACCCCTCACCCTTTACCTCACCCAACCCTTATTTTTCTAGCTCTTACCACTTCTATCCTTCAGGGACAAGGGGCATT TTTGTAAAAATAAAAAACATGAAATGAAAATAGAAGTGAACATGCCAAAAAAATACCTAAAAATGAGTACAGCAGCAACA GCTAGATAATCACCCATTGCAGCTGATTTTGTCGGTAGTAGAACTATGTATAATTGTATATTGTGCTATCATTTTCATGG GCACCATTAGCCATACCATTACTTGGGAGAAGCCATGCAATAAAATTCCAGTTTCACATAGTGAGATGATGGCCCTCATT GAAGTGTGATTAATTGGAGTTGAACATAATGAGGAAATGGTGAAATAATTAAAAACTTCACTTGTGTTTGGTTATATTTT CTTCAAACATCTTCTAATAACACACCTAATACTTGGTTATGCTATTGATGTTTGTTAATTTTGGGTTTAGGTAATCTGGG TGGAGCACTTGGAATGCCAGAAGGGAGCAGTCCACACAATGTATCGCGCCATTGTGAACAGTGGCCTGGCCTTCGGGGCA AGGCACTGGATTGCGACATTGCAACTTCAATGCGAACGTCTTGTTTTCTTCATGGCAACTAATGTCCCCATGAAGGATTC CACTGGTGAGTATGAGTAATCAATTCAATTCTACCATATCTCATTGTTGCAACTTGCAACCATTAATTTCTCTTTGTTCA TTCAATACTTGAATAAAGAGGTAAGTATAAACTAATCAGACTAATGGTGATGATAAAATGTTAGGTGTTGCCACGTTGGC TGGGAGAAAAAGCATTTTGAAGTTGGCACAAAGAATGACATGGGGCTTCTGCCATGCAGTCGGGGCATCAAGCTTCCACA CATGGACTAAGGTTACCAGCGAAAATGGGGAAGACATAAGGATTAGTTCTAGAAAGAACTTGAACGATCCTAGTGAGCCT CTTGGGCTGATACTGTGTGCAGTTTCTTCTGTGTGGCTGCCTGTCTCTCATAATGTTCTGTTTGATTTCTTGAGGGATGA AACTCGCAGGACTGAGGTAATTGATTTTCCTTCCAAATGTTTCTGTTTATTTGGTGAGTGATTTTGAAGGGTGATTGTGT TGATAATTGTCATTGTTGTCACAGTGGGATATCATGTGCAGTAGCGCTTCAGTGCAGTCCATTGCAAATCTAGCCAAAGG GCAAGACCGAGGCAATGCAGTAACCATTCAAGTAAGTTATTTCGGTTCAATACACTACACACTCACCTTAAGCAACGTCT CGGATTGAGTCTTATAAATTCATGTACTTGTCACTATTGATAATATGTGAAATCAAAATAAGCAATTATGTTCCTATATT AACCAAAATATGGGATTCTTCTCATTTTGTAGACAATAAAATCCAAAGAAAACAGCATGTGGATACTGCAAGATAGCTGC ACAAATTCTTATGAGTCAATGGTGGTGTATGCTCCAGTGGACATTACTGGCATGCAGTCTGTGATGACAGGATGTGATTC AAGCAACCTTGCCATACTGCCCTCAGGATTCTCAATTGTTCCTGATGGCCTAGAGTCAAGGCCATTGGTGATTACTACAA GGAAGGAAGAAAAGAACACAGAGGGAGGATCTTTGTTTACAATAGCATTCCAGATCCTTACCAATGCTTCTCCTACAGCA AAGTTAACATTGGAATCTGTGGACTCGGTCAACACTCTTGTATCATGTACATTGAGAAATATCAGAACAAGTTTACAGTG TGAAGATGGATAGTCAAAAATCAAAATCAGATAATTACAAGATAGGCTTTGATTAGATGTGATATTCTTCTGCATTCTAT CCCCTTTTTGGCCAGTGTTCAGCCTGGCAAAACTAGCTTGCATTTATGATTTATCTCCTTACTTTGGGTTAATTTTATTC ATTGTTCCATTAGGAAGGAGGGTTTGGACTGAATATTTATATTTGTAATTTGTATCTGCAGTTCCATAGGCAGAACTAGA AAGAGAGAAAAAAAAAAGTTTAGAGCCTAGAAATCATGTATGTCGTCTTGTACAGAATTATCATTTGTTAATTCCTTATG TGTTTGGTTTATGCCTAACTTGCGTGGTTGGTTTGATGGCTCACATTGCAAATTATCTATTTAAAACCGTAGAAATGAGA AATTACTATTTCACACAAGTTTGTTTCTTCAGGTTGACTATACCAATCAAGTTCCATCTTAAAAAGAAATAAAAGAACAT TCCCATCAGTGCTTTAAAAAAAATAGGCAAAGAAAAGAAACCATGGACTAAGCCTTCAATTCTAGGAATGTATTTCTTTA AGAGCAAAGTGAAGACAAGACAAGAGTAATGTGCTTCTTTGTAAGTCCTCTACTACTTAACTGGAATTTTAACCTAAGTG AGTCCTCTACTACTTTGTAATTCATGATCAACATAAACCATAGTCTTCATTTATGGAAGACAGGCCTTCCCAAATTGTTA AGGACACTCAGAAGCATAAACAGTCATAACAGATGCCCTGTTAGCGACATCTCTTCAGGGTCTAAACACACTCCAAAAAG GGAAAGACAAAAAAGAGTAAAGAAAAGGAAGAGCTCAACATTGAAGGTAAACTAAAGGGTTATGGACTATAGAGCTCATC ATTGAATGTAAACTAAAAGGTTATAGACTATAGAGCTCACCATTGAATGTAAACTAAAAAGTTATAGACTATAGAGCTCA TCAGCAACAACAAAAATGAACATTTTCATCAAACAATTGTCTGCACAATAAGCATTCAAGTTCTCATGAACACTGCCATA ACTTCACATCTGGGGGTCATCAAAACAATCTCATTTTTTAGACACTCAATCAGTATTCACAGTCCACATACACTCAATTT ACCTCTATCTCTCTTTTCCTATCATATCATATCATATATCCCATTTATCAATTCTCACCTCTTCCTTTATCTATCTTTCT AAAATTGGTGTCTAAACACAAAGTGGCTCTATGAAGCACAATTCTTATCAAAATCAGTATCCAATTCCAACATTTCATCA AACACCTAAAGGGCACAACAAGCAATTGAGGTTCCCACAACAACAGAGTCACAACATTCAATTCTCAATTTCACTATGCC CCAATAAATTACAACCCAGAACAACTCAGGACTTTTACACTACACAAAAACATGAACCAATTCAGATAAAAAAAGCACAA ATCAACAACAGTAAGAGACTAACATTCAGAACTTTTGCATACACCTAAGCCTGGCCCTCCTCCTCCTGCTGCTGCTGCGG CTCCTGCTCAGACTCCAACGGAATCGGAAGATCACCGGAAGGTTTGTTCTTGGCACCCCTACTAGGAACAGGAAGAGCGA GAAAGGCCTTGGTTTTGCTGATGGGTCTGGTCTTGGTCAGCTGAACAATGTCACCGACCTTGAACTGATTCTCAGGGTCA TGAGCCTGGTACTTCTTCTTCTTCCTGACACGCCTCTTGTACTTGGGGTGCGGCGCCAGACGAACAACCTCCACCGCGAC GGTCTTGTCGCTGGCGGAGCACACCACCTTCCCTTGGATGGATTTCATGGCCTTGATCGACGGGAGGAACGACGGCGGTG AGTGGGTGTGGTGGGTGAGAGCGGTGGCGGGTTTGGAGAGAGGGGTGAAGGGTGTGCCATGGATGAAGGGGTTGGAAAGC TTGGGAGGGAGTTGCAGAAGCCACATTGTAATCGGAAGGGATAAGGAAGAAGATAACACTGCTTGGTTTCAATTCTCTTT TA
CDS sequence (LotjaGi3g1v0018300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTGCTGACATGTCGAACAATCCACCTCCAACTTCTCAAACCAAAGACTTATTTGCCTCTCCAGCTCTTTCTCTTAG CCTTGCTGGGATTTTTCGCCATGGCGGTGCGGCGGCGGAGGCTGAGGCTGCCACTTCTCACATGGAGTTGGAGGATGGGG AGGAGGGGAGTGTTGGGATTGAGCGCCTTGAGGAGATTAGCAGTGAGACCTCAGGTCCCACAAGATCCAGATCAGAGGAT GATTTTGGTGAAGGAGAAGGTGAGCACGAAGATGATGACGGTGATGGAGACAAAGATAACAAGAAGAAGAAGAAGAGGAA GAAATATCACAGGCACACACTTGAGCAGATCAAAGAAATGGAAGCGCTTTTCAAAGAGTCACCACATCCTGATGAAAAGC AGAGACAACAACTTAGCAAGCAATTAGGCCTTGCTCCTAGGCAAGTCAAGTTCTGGTTCCAAAATCGTCGAACCCAGATC AAGGCAATACAAGAGCGTCATGAAAACTCATTGTTGAAGACAGAAATTGATAAACTAAAGGAGAAAAATAAGAGCTTGAG AGAGATCATAAACAAAGCTTGCTGCCCCAATTGTGGGGTGCCCACTACAAGCAGAGATGGTGCCATGCCAACTGAAGAAC AACAACTACGCATTGAAAATGCCAAACTCAAAGCTGAGGTTGAGAAACTTCGAGGAGCTTTAGAAAAATACGCACCAGGG ACAACTTCCCCTTCATGTTCTTCTGGCCATCATGACCAAGAGAACAGAAGCTCTTTGGATTTTTACACTGGAATTTTTGG ACTTGATAAGTCAAGGATAATGGACATTGTAAACCAAGCAATGGAGGAGCTCATAAAGATGGCCACAGCAGGGGAACCGT TATGGCTGCGTAGCTTTGAGACCGGTCGCGAAATACTTAACTATGATGAGTATGTGAAGGAGTTTGCAGCTGAAAATTCC GAGAGTACTGGGCCAAAGAGATCCATCGAAGCCTCAAGAGAGACAGGGGCTGTTTTTGTTGATCTCCCAAGGCTTGTCCA AAGTTTTCTAGATGCTAATCAATGGAAGGAAATGTTTCCGTGTTTGATATCCAAAGCAGCAACAGTTGACATCATATGCA ATGGAGAAGGATCTAACAGGAACGGTGCAGTGCAACTGATGTTTGCTGAACTACAAATGCTCACACCAATGGTGCCCACA AGAGAGGTGTATTTTGTCAGGTACTGCAAACAATTGAGTGGTGAACAATGGGCAATCGTTGATGTATCCATAGACAAAGT AGAAGACAACATCGACGCTTCCCTCGTCAAATGCAGAAAACGCCCATCCGGTTGCATTATTGAGGACAAGTCAAATGGCC ATTGCAAAGTAATCTGGGTGGAGCACTTGGAATGCCAGAAGGGAGCAGTCCACACAATGTATCGCGCCATTGTGAACAGT GGCCTGGCCTTCGGGGCAAGGCACTGGATTGCGACATTGCAACTTCAATGCGAACGTCTTGTTTTCTTCATGGCAACTAA TGTCCCCATGAAGGATTCCACTGGTGTTGCCACGTTGGCTGGGAGAAAAAGCATTTTGAAGTTGGCACAAAGAATGACAT GGGGCTTCTGCCATGCAGTCGGGGCATCAAGCTTCCACACATGGACTAAGGTTACCAGCGAAAATGGGGAAGACATAAGG ATTAGTTCTAGAAAGAACTTGAACGATCCTAGTGAGCCTCTTGGGCTGATACTGTGTGCAGTTTCTTCTGTGTGGCTGCC TGTCTCTCATAATGTTCTGTTTGATTTCTTGAGGGATGAAACTCGCAGGACTGAGTGGGATATCATGTGCAGTAGCGCTT CAGTGCAGTCCATTGCAAATCTAGCCAAAGGGCAAGACCGAGGCAATGCAGTAACCATTCAAACAATAAAATCCAAAGAA AACAGCATGTGGATACTGCAAGATAGCTGCACAAATTCTTATGAGTCAATGGTGGTGTATGCTCCAGTGGACATTACTGG CATGCAGTCTGTGATGACAGGATGTGATTCAAGCAACCTTGCCATACTGCCCTCAGGATTCTCAATTGTTCCTGATGGCC TAGAGTCAAGGCCATTGGTGATTACTACAAGGAAGGAAGAAAAGAACACAGAGGGAGGATCTTTGTTTACAATAGCATTC CAGATCCTTACCAATGCTTCTCCTACAGCAAAGTTAACATTGGAATCTGTGGACTCGGTCAACACTCTTGTATCATGTAC ATTGAGAAATATCAGAACAAGTTTACAGTGTGAAGATGGATAG
Protein sequence (LotjaGi3g1v0018300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGADMSNNPPPTSQTKDLFASPALSLSLAGIFRHGGAAAEAEAATSHMELEDGEEGSVGIERLEEISSETSGPTRSRSED DFGEGEGEHEDDDGDGDKDNKKKKKRKKYHRHTLEQIKEMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQI KAIQERHENSLLKTEIDKLKEKNKSLREIINKACCPNCGVPTTSRDGAMPTEEQQLRIENAKLKAEVEKLRGALEKYAPG TTSPSCSSGHHDQENRSSLDFYTGIFGLDKSRIMDIVNQAMEELIKMATAGEPLWLRSFETGREILNYDEYVKEFAAENS ESTGPKRSIEASRETGAVFVDLPRLVQSFLDANQWKEMFPCLISKAATVDIICNGEGSNRNGAVQLMFAELQMLTPMVPT REVYFVRYCKQLSGEQWAIVDVSIDKVEDNIDASLVKCRKRPSGCIIEDKSNGHCKVIWVEHLECQKGAVHTMYRAIVNS GLAFGARHWIATLQLQCERLVFFMATNVPMKDSTGVATLAGRKSILKLAQRMTWGFCHAVGASSFHTWTKVTSENGEDIR ISSRKNLNDPSEPLGLILCAVSSVWLPVSHNVLFDFLRDETRRTEWDIMCSSASVQSIANLAKGQDRGNAVTIQTIKSKE NSMWILQDSCTNSYESMVVYAPVDITGMQSVMTGCDSSNLAILPSGFSIVPDGLESRPLVITTRKEEKNTEGGSLFTIAF QILTNASPTAKLTLESVDSVNTLVSCTLRNIRTSLQCEDG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 573 | 573 | - | – | |
| MobiDBLite | 35 | 114 | 80 | - | – | |
| MobiDBLite | 45 | 62 | 18 | - | – | |
| Gene3D | 85 | 162 | 78 | 8.8E-20 | – | |
| PANTHER | 88 | 758 | 671 | 0.0 | ||
| PANTHER | 88 | 758 | 671 | 0.0 | – | |
| SUPERFAMILY | 96 | 164 | 69 | 2.82E-20 | ||
| ProSiteProfiles | 103 | 163 | 61 | 17.961 | ||
| SMART | 105 | 167 | 63 | 3.7E-18 | ||
| Pfam | 106 | 161 | 56 | 2.4E-18 | ||
| CDD | 110 | 161 | 52 | 1.20008E-17 | ||
| ProSitePatterns | 138 | 161 | 24 | - | ||
| Coils | 162 | 189 | 28 | - | – | |
| Coils | 213 | 233 | 21 | - | – | |
| ProSiteProfiles | 266 | 502 | 237 | 39.183 | ||
| SUPERFAMILY | 268 | 499 | 232 | 1.29E-31 | – | |
| CDD | 270 | 498 | 229 | 3.68848E-112 | – | |
| SMART | 275 | 499 | 225 | 1.1E-70 | ||
| Pfam | 277 | 499 | 223 | 7.6E-56 | ||
| SUPERFAMILY | 521 | 693 | 173 | 2.88E-14 | – | |
| Phobius | 574 | 594 | 21 | - | – | |
| Phobius | 595 | 760 | 166 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. | ||
| Molecular function | Lipid binding | Interacting selectively and non-covalently with a lipid. | ||
| Molecular function | Sequence-specific DNA binding | Interacting selectively and non-covalently with DNA of a specific nucleotide composition, e.g. GC-rich DNA binding, or with a specific sequence motif or type of DNA e.g. promotor binding or rDNA binding. |
Expression pattern of LotjaGi3g1v0018300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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