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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0058400 |
| Transcript ID | LotjaGi3g1v0058400.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pentatricopeptide repeat-containing family protein; TAIR: AT3G08820.1 Pentatricopeptide repeat (PPR) superfamily protein; Swiss-Prot: sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820; TrEMBL-Plants: tr|I1LVF2|I1LVF2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0058400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:6138366..6147410) extracted from Lotus japonicus Gifu genome v1.2.
GTCGGTTTTCGGTCGGGTGTCATTTTTTGCTCACCCCTAACGTTGACCCGTTTTTTGGTGGACCCCGACCCAAATCTATA TATGTGATGAAGGTCTTGTTCTCTGTTCAGTCTTGACTCTTTTGATCATCTCATAGAATGTTTTTCATATAACTCCACAA CCATATACCATCACCATGGCCTTGGAGTTGAAGAATTTGCTTATGCAAGGCCTCAAGTCTTTCAACCAAGTGAAGGTCGC CCACTGCCGCCTCCTCCGCCTCTGCCTCTGCCTCCACCAAGACAACTACCTCGTCAGCCTCGTCTTACGCTCTTCCTTCC ACTTCGGCAACACTCACCACCCCAAGCTCCTCTTCGACCAAACCCACAACCCAAACACCTTCCTCTGGAACACCATGATT CGCGGCATGGTCGACAACGACTGTTTCCATGACGGCATTCAGCTCTATCACTCCATGCACCAACAGGGGTTCTTCCCGGA AAGCTTCACCTTCACTTTTGTACTTAAGGCGTGTGCCAGGCTCTGTCATTTCCATTTGGGTCATACCCTTCATTCGCTTG TTGTCAAAACTGGCTTTGTTGGTGACGTGTTTGTGGAGACTGGGCTTCTTGGGTTCTACTCCAAATGCGGGCATTTGAGG GATGCCCGGAAGGTGTTTGATGATATTCCTGAGAAAAATGTTGCGTCTTGGACTGCTCTCATTTGTGGGTACAGTGAGTC TGGCTTGTGTGAAGAGGCTGTTGATTTGTTTAGAGGGTTATTGGAGATGGGTTTGAGGCCTGATAGCGCTAACCTTGTTC ATGTTTTGGGTGCATGTGCAAGGTTAGGGGATTTGGGAAGTGGACGGTGGATAGATAGGTATATGAGTGAGAGTGGTTTG CATAGGAATGTCTTTGTGGGGACCACTTTGGTGAATATGTATGCAAAGTGTGGGAGCATGGAGGAAGCACGTCGTGTGTT TGATGGGATGCTTGAGAGGGATGTTGTTTGTTGGAGTGCCATGATTCAGGGTTATGCGTCTAACGGGCTTCCGAGAGAAG CACTTCAGTTGTTCTTTGAGATGCAGAAGGAAAATCTAAGACCCGATTGCTTTGCCATGGTGGGGGTTCTGTCTGCATGT GCAAGGTTGGGAGCGCTACAGTTGGGTAATAGGGCTAAGGGTTTGATGGACGCTGAGGAGTTTTTGTCTAATCCCGTGTT GGGTACTGCCTTGATTGACTTGTATGCGAAATGTGGAAGCATGGCACAGGCATTGGGGGTTTTCAAGATGATGCAGAGAA AAGATCGTGTGGTCTTCAATGCTGTTATTTCTGGACTGGCTATGTATGGACATGTTGGAGCTGCATTTGGAGTATTTGGC CAAATGGAAAAGCTTGGAATTCAGCCAGATGAGAATACTTTTCTTGGTTTGCTTTGTGGATGTACTCATGCTGGTTTGGT TGGTGATGGTCGCCGTTATTTTAATAGCATGAGTTATGTCTTTTCAGTAACTCCTACGATTGAGCACTATGGATGCATGG TGGATCTCCTGGCGCGTGCAGGTTTGTTGGTTGAAGCACATCATTTGATCAAGAGTATGCCCATGAAGGCTAATGCTATT GTTTGGGGGGCATTGTTGGGAGGATGTAGATTACATCAGGGTACCCAATTGGCCGAACATGCGTTGAAGCAGCTCATTGA GTTGGAACCATGGAATTCAGGACATTATGTTCTCTTAGCAAATATATATTCAGCTAGTCGTAGATGGGATGAAGCTGAAA AAATCAGGTCAACTTTGAATGAGAAAGGAATGAAAAAATTACCTGGGTATAGTTGGGTTGAAATTGATGGGGTCATTCAT GAATTCCTTGTAGGAGACACATCCCATCCTTTTGCACACAAGATATATGAAAAACTTGAAAGTTTATTTAAGGACATTAG GGAAATTGGTTATAATCCGACCACTGAGTTTGTGCTCTTTGATATAGAGGAGGAGGAGAAGGAGCACTTCCTTGGATGTC ATAGTGAGAAGTTAGCTGTTGCATTTGCACTGATCAATACCAGTGCCAAAGATGTGATTCGTGTTGTTAAAAATCTTCGT GTATGTGGTGATTGCCATGAGGCTATTAAACTCATTTCAAAAGTTACAGGTAGAGCGATCACCATTAGGGATAATAACAG ATTCCATTATTTCAGTGAAGGTTCATGTTCTTGTCGAGATTATTGGTGAAATATTCATGGATTCTGGGGTTTAAAGTTTA AACTCTTTGTTTGCCTTCAAAAGTGTTAGACTTCAGATTCTGTCTTGTGTATGTTAAAATGGAATTTAATATTCTCTTCA ATCCTTTACAAGTATTCTGAAAGGGGAGAAATGAAATCTATGACATCTTGCACCTGACTTGAATACACTGGAGATTGGAA ATAGTTTTGACTTTTGATGCAATCAGATGGATAAATGGGCACTTGTTAAGTGCACCTGCATACCTTCTGTCACAGTTTCT TCCATCCCTCAATTTGAAGCAGCAATTTGGGTTGAAATGTGAACTTGAAAGTTGCTGTCATCTTGGAGAATGCAAATACG AAAATGTGAAATATTCTACTGAGGTAGAACTTTTGTTTCAACACATAATGATCAAAACTAAGCTGGGTTCTTTTGTAGAT TATTTAATCTGCCCTTTCCGTTTCTTCGTCAACGTCCCCGCATTCAGAAGACATGGAGCCTGGCGTCAAGAAGAGAGAGA ATCCCGATCCAGATTTACCCAAGGCGATCTCCACCGTCGCCACCATCTTGAGATGACTGGATTGCCGACTACCAGTGTTC GTCCCAAAATGCTTTCGCATTCGTCTAGGGTTTACCCATGGCTGATTGGTGTGATTACCTTCGAGACTCGCATGACATTG CTCAGGTCGGTGCTACGATCTATGAGGGAAAAATTGATTTATGGTTGATTGGTTTTCTCTATCTCCTTCTAATTTGCAAT AAAATGGATTTTGTTACTTTAGTTTTAGTAAAGTTCTCTATCTGACTAATTTTCTCTATATGTTGCTATTGCTTACATCT TCCTGAACTCTTCAGATTGTCAAGGAGCAAGGCGGACAGTCACGGTACCAGCATAATATGGAAGTGGTTTGGTTACTGAT TTTCCTAGAGGCCTGCAAAGGGTGTGTTCTGTCCAATGTTATCATTTTTCTTCTTTCATGTTATCGTTTTATGCTGCAGG AGAGTGTAAGTTCTATTGCTAGAAATGCATCTGAAGGAAATATAGACAAGATGAAGTTAAACCATTAATGTTCATGCACT TCTTTTCTTTATTAAAGCCTTTTTTTCTCTTATTGATATAGTTATCCAAGTTTTTTGGTGAGCACTTGCTTTTGATGGTT CTTTTTCTACACTTTATTTGCTTTCAAATAGGACTCTACCCATGATTTTCTTAACTGGTTCTTATCTGGTATTGAATACT TGATAAGAAAATACTTTTTAGCTGGTTTTGATTACATATAAGAATTTTTAGTTTAGTTTATTTTCTGATTATCTAATTTG GATTTTTCATTCCCTTCTTTTGGAGAATCTCAAGATATTAGCTGATGATTACGTAGCTGTTTCGTCACTTACATTGGAAA TCTCTACTATTTTTAGTCTTTTGCAGAGTTCAACTCCAATTTTTGTTTTCTATCTGTTTTTGCTTTTACATTTTGTAATT CCAGTTGTCACAACACCTGCATCTCCAATGTTAGTTCTATCTGGGATAGAGAAGTGAATTGTAGAAGCTTTCAAAACCAC CCTTATATCTATAAAGAATCCATAGTATATATATTTAGGAAAAGATCTCAGCACAGTCATCGCTTATGTGTCATCTACTG ATTGGTTAATATCAGGAAAAATCCTACATGGCACTCCATGCTTCATTCTTCTTAACCTACACCTTTATCATTATCCTTCA CTCATCCCTCCTTAATGACATTTATTCCCCAGAAGCGTTTCAGCGTAACATCCTCAAACAGTTTCAACCTTCAATTTCAC CTCTTCCAATCTGTTTTAATCGCATGTCTCAATGGTTGGGAGGGAGTAAATCCGTTTCAACCCATCGCTCCCTTCCTCTC TTCCCCTTCAATCGCATCTCTCATGGCCCTTCCAATTCCCCTTCAATCGCATCTCTCTTGCCCTTTCGGTTCCTGTTTCG AATCTGTGTAAATGGGTTTGATATCTGGGATGTTTATGGGTGGCATAGAATTGATGGCAGCATGGGAGAGGATGATGAGG CACCGAAGTGCGTTCCTATCTTCACAGTTCCATGAACCAAATCGCCGCTTCTATCTCACCACCGTATCCTTTCCGGTTCA CACAAATCCGTATATCTCTTCCAACTCAAGTTCTTCCATCTTGGTTCATGTTTCTCAACCCGACGTCTTCTAAATCAGAG TTGCTCTTTGATTTAGGGTCCCAAATCATCCAGATTGTGATTCTCTTTCTGAGTAAACCATTTTATTATGACAGGACAAC CAGGCATGTAATCTTGGGGTGAGGAAACGGATGGAGGGGATGATGATAAGTGACTGTGAAGAAGTCACTGAATATAGAGG TTAGTGCTCCTTTCCCAAATTAATCAAACTTCATTCTTTGTCATGGCTGCATCTTGAAATGATCTTTGATGATATCCTAA CAGTATTATGTTGTTCATAATGATATGGTGATACTATTGGTTTTGTATCAACACGTTTTTCAATTTCTTATGCAGGTTTT TTTAATTGCCCACCTATGTTTCTGATCTGTATAGAAGAAAAATTAGTTTTTAATTTGATCTCTCTGAAACTGCTGCAGGT ATTGAGATTTTTAAATTTTAATGCATGTCCCTTTTCTATGCTAACTTTGTGCATAACACAAGTATTCTCTTCTTCTGAAT CTGTTATCTTCATTTATTTGGGTTTTGATTTTTTTGCCTTCATATCTTTTTAGTGTTCTATTCTGAAGATGCTTAAAGTG AGATAAAGCGGGTTCGCCACAGGTTCTGGAGAGACTGTAGAGGAAGAGCCATGCACAGTTCGAGCTTCTCTCAAGTTTTT TCCATAATATTCATGGTGCATCCTCTAATTACAACAGCTACCAAGTTCACATCCAAAATTTACTCATTCTAAGTGCTACT TCTGCATTGTCCTTTGCACACTTGATATTTTATATTTTTAGAACTGTGTTTATTTTGAGTCGTGTATGTTCTCATTCAAC TGAGGTTTTGTTTTTCTTTTCTTTGCTGTGCTGATTTTGGAAGCAGCTTACTAAGGTGTCTGTACATGAAGAACATTCAA GTATTCCATGTGAGAGCTTGAACATCACAAAATATGATTGAACACTGAGCATATGAAGAGCTTTATGGCGGAGAGTTAAC AGAATTGTCTTATGGCAGATTGTAGATTCAATGATTTCTTTGTTTAAGGTGGACTTATCAGGAAGAGGAGAGCTTGCTGA GTGCCAGGTATATGAATCGGTCATTTAAATTCCTTTACAACAACCTTTTCCCTTCTCTATGTCCAATTTTGCTGATATGA AAAATAACCATTGCAGCAAAAACTGGCACAAATGCATTCTTGATTGATAAAGATAGCTGGCTGAACCCTGGTGACAGCAA CAAGCTTCATTGCATTGGTTATCTTCTTAGTTTTCACCATTTCGATTCGTTCTCAGAGCTTGCTTGTGCTGCCACATCTC GGGGAACTGCACTACCATCTATAAGTAAAATTCTGCACAATTTCGAATGCATGTTCTTTTCTGTGTTTTATGTTCCTTTG ACTAAAGAAACTCTTGCTCTTCCTGTAGCCTTCTATCCTTAAGAAGCTTTTTTTGTTTTCCCTTTTCATTCTTTGAACGG TTTTTTTCCCTATCTGTGTGTTTAACTATTGCTTCATTTTCTTTTCAGTGGAAAGAATATGAAGAAGAAGCAGTATGTTG GAGTACCATCTTATTTCTCTTCTGCACTGCAGTATGTATCTAATTATGTCATTTCCTTTTAATTTATTCACTTTTTCTGA ACTAATTTTAGCATAATGATGGCAGGAGGGATAACGAAATAAGCAAGCTGGAAGAAACCTCCTTCTCAAGAAGTCCTTTT TACAGTTTTAAAGTTCGGCATGATAAGATATTTATGGTAAAATTTTCTTTTCTTTATTCATTTCCTCAAGCTGAATAAGC ATAATTGAGAAACTTGGCTGGGCTCCAACAATGAAGTTGAACGTAATGACGTTGTTAATTAGGTGAAAATGACATTTTTT ATCACCATTTAACATAGTTTATGAAAATGAGCACTTTATCTTCTTCAAATACAGAAACGAATTGTTAGAACATGTATGAT TTGTGAGGAATGAGTGATACTTATTTGATCACTATTATGTAAGATATTTGAAGAATGTTTAAATTTACTAGGTAATTTTT ATTGTTCAGTTTTTCATGACCTCCTGATCATTTGAAGGACCTTTACTGAAGTTAAGACATAAGTGTGAAAATCATAGCTA TACTATGGATTGCTCCTCTGCCATCCTATAGCTTTCTTCTAGCTACTCTTCAACTTGCTAACTAGCTTTCTGAGAATGTT TGGAAGTGCAGCAAATATCCCATGTTTGCTATGCCATTTAGTTTATCATATACAGGTCCATGCTTAGTTTGTAATTGTTA GGTAGCAGCAAGTCTTTGAGCATGAAATTCGCAAAGAACTTATTTATTTGCGTATTTATCGGCTTCCAGATTTCCCTTTT TTCCCCTCTCATCCAGATTCTAACCATTCATGGCTTCAATCGCATCTTTCATAGCCTGCTCTGATGCAAACGTCACAAAT CCAAATACCCTAGACCTTCCAGTCTCACGATCATTGATTTCAACAGGTACGAATTTCATGCTCTTTCGTTTCATCTCTTC TACATTATTTCTTTTGCTGATATATGGTTTCATGATGTTTATGGCTTCTGGGGAATTAGGATTTACTCATACTCTCTAAC TTTGACAGCAGCAAGGAGCTTTTGCGCTATTGATAAAGATTGCGGGTGAGGAACATTTAGTTGGGAACGAGAAAGGTGTT ATTGGCCAAGAGTCTGACGAAGTTTCAATTCCTTCTCATTTGATGACCGGTACTTCAGAGGTAAGTTTGTTGAGGGGAAA TCTATCACATTATTACCCTTGCCTACACTCTGATATACATTCATTGGGTTATTTCAGGGACTATTTGATTTTATAGCAGC AGCTCTTGCCAAGTTTGTTGATTCAGAACCTGAAGGTTTTCCCCTCCCTCATATTTTTTCCCAAACTGCCGTTTCGAGCC TGCAATTCATCTATTACATATTCTCACCGTTCGTCGCTTCAATGGCATCTCTCATAGCCTGATTGGATGCAAACCTCACA AGTCCAAATCCCCTCTCTATCATAACACGTTGCATAAATTGGGAACAACAGGTTTGCTATATAGCCTCTCTAATTTTTCT GAAAAATAACACCAAACTTCAAATTTCATTTTCTGTATTTTGTAGGCTGTTCACTGTCTGTATTTTTTTCTAATGCTGCA CAATCTAACTTCACAGCAGCAAGGAGATTTTGGATACTCTCAAGTATTTCTTTTCCAATTTTGCTTCCAATTGTGCGTTC TGCAATTTCATATACTTTACACATTTTGTGTAAAATTAGCTACTGTGATTTGTCTGATATGATTAAAGGTGAAGTAATAT GCTATATGTTCATCAAAAGCTTCTTTAATTTCTTGGTCAAAATTTGATAAAAGAAACTCATGCTTTAGCATAATTTAATT TGTCTATAAAATGTGTGCACCATGCAGATGAGAACTAATAATGGAGGAGGAGAGGCTACAACACGTGAAGTAAAGAAGAA AAGATCAGAAGCAATCTCAAAAAAGCCTAAGCAAGACACATCAACAGCTTCTTCTTCAATGAAATGATGAAGTGTAAAGA AAAGATCACTGTCCTTCAGCTATCTTAATCAAGTCCCAAAACTGATAGGAAACCATATTTATCTCACCAATGTATGATTC TCATGCAGCATGAAGGAGAAATTCTGATTGGTTTTGTCAGAGAGTTTAGGATGGATCTCAGAGAACAATGGAGGTTGATC GACCCAGCGGTTCTACAACATTTAATATGATTGCATTTTCTCTCTAGGATATGATATGTTGGTGAGTGTCTTTTTCATTT CAAAGTTTCTTATCATGACAACAAGGAGATTTTGTACCCTGCATTAGATCCTGCTGTGAACATTCCTGTGTTCAATTGTC AATATGAATGGGTTTGGACTCACACACTTTCCAAATATGAAGCTCCTCACTACAAGTCGGTATGCTTATTGTTACAAGCA GATATATTTGTAAGAGTTTTTTTATATATTCCACTGTTGGTAGTATACTAACTTGATGACGTTTATTTTCCTTTCCTTCT ATGTAGCATGTTCCTAAATGTGTTGGTCAATATCTAATAGAAGCACGTCTTGACAGTTGGATTTCATCGGCCGTTCCGGA GCGAGGGTTGAGTGTCGTGTTATTATTCATCTCACTCATGCATATGTGAAGATAGGCAGCGGATGGAGAAATTTCTGCAG AATTAATAATGTGTTGCCATTTGATGAGTTGACCTTCAGGTTTACAAGTTCAGATGCTAGGATTGTTCATGTTAATTAAT TGGGCTTCTTAGGATCTTAAGTTAGGGAAATGTTTGTTATCCAGTATGCCTTCGCTGATTTTTTTTTTGAACTGTTGTGT CCTACTGAAATATCATGAGGGAAATCGTTCTGGTGTCTCTTATTCACTGGGGGCCAAGCTTAAAGATAGTATCGCTGTTT TTTGTTCACGGGATACGTGAGTGACCAGTGAGGATTGTCATTTGGCCCTGCTGAACCTGATTTTGTAGTGTCTGTATGCA GCTTCACTGCTTTCTTTGAGACCTATTAGTTGTATGGTTTCCCTTTTTTCTTTGTGTTAGCTTTCCATTTCTGTTTGTAA TGTTCCATTGTTTGAGACTTTTTATGTAATGTACTAATGTGACACCTATGTAATTTTGGCATTTCCCTACCATATTTATA ATATG
CDS sequence (LotjaGi3g1v0058400.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCTTGGAGTTGAAGAATTTGCTTATGCAAGGCCTCAAGTCTTTCAACCAAGTGAAGGTCGCCCACTGCCGCCTCCT CCGCCTCTGCCTCTGCCTCCACCAAGACAACTACCTCGTCAGCCTCGTCTTACGCTCTTCCTTCCACTTCGGCAACACTC ACCACCCCAAGCTCCTCTTCGACCAAACCCACAACCCAAACACCTTCCTCTGGAACACCATGATTCGCGGCATGGTCGAC AACGACTGTTTCCATGACGGCATTCAGCTCTATCACTCCATGCACCAACAGGGGTTCTTCCCGGAAAGCTTCACCTTCAC TTTTGTACTTAAGGCGTGTGCCAGGCTCTGTCATTTCCATTTGGGTCATACCCTTCATTCGCTTGTTGTCAAAACTGGCT TTGTTGGTGACGTGTTTGTGGAGACTGGGCTTCTTGGGTTCTACTCCAAATGCGGGCATTTGAGGGATGCCCGGAAGGTG TTTGATGATATTCCTGAGAAAAATGTTGCGTCTTGGACTGCTCTCATTTGTGGGTACAGTGAGTCTGGCTTGTGTGAAGA GGCTGTTGATTTGTTTAGAGGGTTATTGGAGATGGGTTTGAGGCCTGATAGCGCTAACCTTGTTCATGTTTTGGGTGCAT GTGCAAGGTTAGGGGATTTGGGAAGTGGACGGTGGATAGATAGGTATATGAGTGAGAGTGGTTTGCATAGGAATGTCTTT GTGGGGACCACTTTGGTGAATATGTATGCAAAGTGTGGGAGCATGGAGGAAGCACGTCGTGTGTTTGATGGGATGCTTGA GAGGGATGTTGTTTGTTGGAGTGCCATGATTCAGGGTTATGCGTCTAACGGGCTTCCGAGAGAAGCACTTCAGTTGTTCT TTGAGATGCAGAAGGAAAATCTAAGACCCGATTGCTTTGCCATGGTGGGGGTTCTGTCTGCATGTGCAAGGTTGGGAGCG CTACAGTTGGGTAATAGGGCTAAGGGTTTGATGGACGCTGAGGAGTTTTTGTCTAATCCCGTGTTGGGTACTGCCTTGAT TGACTTGTATGCGAAATGTGGAAGCATGGCACAGGCATTGGGGGTTTTCAAGATGATGCAGAGAAAAGATCGTGTGGTCT TCAATGCTGTTATTTCTGGACTGGCTATGTATGGACATGTTGGAGCTGCATTTGGAGTATTTGGCCAAATGGAAAAGCTT GGAATTCAGCCAGATGAGAATACTTTTCTTGGTTTGCTTTGTGGATGTACTCATGCTGGTTTGGTTGGTGATGGTCGCCG TTATTTTAATAGCATGAGTTATGTCTTTTCAGTAACTCCTACGATTGAGCACTATGGATGCATGGTGGATCTCCTGGCGC GTGCAGGTTTGTTGGTTGAAGCACATCATTTGATCAAGAGTATGCCCATGAAGGCTAATGCTATTGTTTGGGGGGCATTG TTGGGAGGATGTAGATTACATCAGGGTACCCAATTGGCCGAACATGCGTTGAAGCAGCTCATTGAGTTGGAACCATGGAA TTCAGGACATTATGTTCTCTTAGCAAATATATATTCAGCTAGTCGTAGATGGGATGAAGCTGAAAAAATCAGGTCAACTT TGAATGAGAAAGGAATGAAAAAATTACCTGGGTATAGTTGGGTTGAAATTGATGGGGTCATTCATGAATTCCTTGTAGGA GACACATCCCATCCTTTTGCACACAAGATATATGAAAAACTTGAAAGTTTATTTAAGGACATTAGGGAAATTGGTTATAA TCCGACCACTGAGTTTGTGCTCTTTGATATAGAGGAGGAGGAGAAGGAGCACTTCCTTGGATGTCATAGTGAGAAGTTAG CTGTTGCATTTGCACTGATCAATACCAGTGCCAAAGATGTGATTCGTGTTGTTAAAAATCTTCGTGTATGTGGTGATTGC CATGAGGCTATTAAACTCATTTCAAAAGTTACAGGTAGAGCGATCACCATTAGGGATAATAACAGATTCCATTATTTCAG TGAAGGTTCATGTTCTTGTCGAGATTATTGGTGA
Protein sequence (LotjaGi3g1v0058400.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALELKNLLMQGLKSFNQVKVAHCRLLRLCLCLHQDNYLVSLVLRSSFHFGNTHHPKLLFDQTHNPNTFLWNTMIRGMVD NDCFHDGIQLYHSMHQQGFFPESFTFTFVLKACARLCHFHLGHTLHSLVVKTGFVGDVFVETGLLGFYSKCGHLRDARKV FDDIPEKNVASWTALICGYSESGLCEEAVDLFRGLLEMGLRPDSANLVHVLGACARLGDLGSGRWIDRYMSESGLHRNVF VGTTLVNMYAKCGSMEEARRVFDGMLERDVVCWSAMIQGYASNGLPREALQLFFEMQKENLRPDCFAMVGVLSACARLGA LQLGNRAKGLMDAEEFLSNPVLGTALIDLYAKCGSMAQALGVFKMMQRKDRVVFNAVISGLAMYGHVGAAFGVFGQMEKL GIQPDENTFLGLLCGCTHAGLVGDGRRYFNSMSYVFSVTPTIEHYGCMVDLLARAGLLVEAHHLIKSMPMKANAIVWGAL LGGCRLHQGTQLAEHALKQLIELEPWNSGHYVLLANIYSASRRWDEAEKIRSTLNEKGMKKLPGYSWVEIDGVIHEFLVG DTSHPFAHKIYEKLESLFKDIREIGYNPTTEFVLFDIEEEEKEHFLGCHSEKLAVAFALINTSAKDVIRVVKNLRVCGDC HEAIKLISKVTGRAITIRDNNRFHYFSEGSCSCRDYW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 371 | 371 | - | – | |
| Gene3D | 33 | 146 | 114 | 1.1E-11 | ||
| Pfam | 66 | 115 | 50 | 1.4E-9 | ||
| ProSiteProfiles | 67 | 101 | 35 | 10.424 | ||
| TIGRFAM | 70 | 101 | 32 | 8.8E-7 | ||
| ProSiteProfiles | 102 | 136 | 35 | 6.051 | ||
| PANTHER | 117 | 226 | 110 | 2.5E-109 | – | |
| ProSiteProfiles | 137 | 167 | 31 | 7.235 | ||
| Pfam | 144 | 169 | 26 | 0.36 | ||
| ProSiteProfiles | 168 | 202 | 35 | 11.641 | ||
| Pfam | 171 | 200 | 30 | 8.6E-6 | ||
| TIGRFAM | 171 | 204 | 34 | 3.2E-6 | ||
| ProSiteProfiles | 203 | 237 | 35 | 6.204 | ||
| Gene3D | 205 | 333 | 129 | 2.4E-27 | ||
| PANTHER | 224 | 325 | 102 | 2.5E-109 | – | |
| ProSiteProfiles | 238 | 268 | 31 | 9.208 | ||
| TIGRFAM | 243 | 271 | 29 | 1.3E-5 | ||
| SUPERFAMILY | 247 | 529 | 283 | 1.56E-5 | ||
| Pfam | 269 | 317 | 49 | 3.4E-10 | ||
| ProSiteProfiles | 269 | 303 | 35 | 12.803 | ||
| TIGRFAM | 271 | 305 | 35 | 1.7E-8 | ||
| Gene3D | 334 | 435 | 102 | 2.1E-23 | ||
| ProSiteProfiles | 339 | 369 | 31 | 8.177 | ||
| PANTHER | 342 | 544 | 203 | 2.5E-109 | – | |
| TIGRFAM | 344 | 370 | 27 | 0.0031 | ||
| Pfam | 369 | 416 | 48 | 1.0E-9 | ||
| ProSiteProfiles | 370 | 404 | 35 | 10.819 | ||
| TMHMM | 372 | 394 | 23 | - | – | |
| Phobius | 372 | 394 | 23 | - | – | |
| TIGRFAM | 372 | 406 | 35 | 7.9E-7 | ||
| Phobius | 395 | 677 | 283 | - | – | |
| ProSiteProfiles | 405 | 435 | 31 | 5.722 | ||
| Gene3D | 436 | 556 | 121 | 9.0E-12 | ||
| ProSiteProfiles | 441 | 471 | 31 | 6.884 | ||
| Pfam | 444 | 469 | 26 | 0.16 | ||
| ProSiteProfiles | 507 | 541 | 35 | 7.925 | ||
| Pfam | 543 | 666 | 124 | 4.8E-42 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of LotjaGi3g1v0058400.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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