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LotjaGi3g1v0061000.5

Overview

Field Value
Gene ID LotjaGi3g1v0061000
Transcript ID LotjaGi3g1v0061000.5
Related isoforms 4
Lotus japonicus genome version Gifu v1.2
Description Cellulose synthase; TAIR: AT5G05170.1 Cellulose synthase family protein; Swiss-Prot: sp|Q941L0|CESA3_ARATH Cellulose synthase A catalytic subunit 3 [UDP]-forming]; TrEMBL-Plants: tr|A0A0S3S8T1|A0A0S3S8T1_PHAAN Cellulose synthase; Found in the gene: LotjaGi3g1v0061000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:6459056..6465440) extracted from Lotus japonicus Gifu genome v1.2.

GCTAAGCAGAGGCCATGGAGTCAGAAGGGGAAGCTGGGGTGAGTAAAACAAGTTTTTTTTTTAATATTTGATTTCTTCAA ATGTTAAATGATTCTATTGAGGTGGGGTTGGTTGATGTTTGGTGACACTTTTTTGATGCCATTTTTTGTTGCTCAGGCAA AGCCAATTACAACATCGGGTGCCCAAGTGTGTCAGATCTGTAGTGATAATGTTGGGAAGACTGTGGATGGTGAAGCATTC ATTGCTTGTGATGTTTGTGCTTTCCCTGTCTGCAGGCCTTGTTATGAGTATGAGAGGAAAGATGGGAATCAGTCTTGCCC TCAGTGCAAAACCCGGTACAAGAGGCACAAAGGTAAATAAATGAAGCTATAATGTTGTGATCTGTGGTGGTGAAGCTGCA TATTAAGATTTCTAGATTTTAATATTCATGAATTGCGTAGCATGTGATTTGAAAATAGGCGTTAAGCTTTTCGTGACACA CATTGGGGAGGATCATTCTTTGTAATGAGATTCTTAATGATTTTTTTTTTTCATGAAAAAAATGTTAACATTGTAATACA CTTGAAAAACATGAAATTCCCTTGGAAGCGATTTGACCTAAATAATGCACTTAAACCTTAATACACTTTAGGAGTGAACA AGCAAGGCAGTGAGCCCGTTTGGATGCGGACTAAAGAACAGTTATTAGAGCTTATCTACTAAACAAGAACACTAGATAAG CTCTAATAAGTGCTATTTGGTTATCTACTAAAAAAAGCACTCGATAAGCACTGATAAGTGCTATTTGGTCAGCATCGGAA CGGGCTTAGTGTTGGTTAGGTGTAGATCACTCGCTCTCTTTCTTTACTTCTCAGGGGTATTTCCAAATATTCCAAGTGGA TAGATAGTTTATCGAATATTTCATTTGTAGTTTAGATATTTCCATCTGTAATCAAACTACTTAATTGATTCTAGGAAGTC CTGCAATTCTTGGAGACAGTGAAGAGGAGGGTGGTGCTGATGATGGTGCTAGTGACTTCAATTATGATTCAGAACATCAA AACCAAAAGCAGAAGATTTCGGAGCGTATGTTGGGCTGGCAATTAACATATGGGCGATCAGAGGAGGTTGGTGCTCCAAA TTACGACAAGGAAGTTTCTCACAACCACATTCCTCGGCTGACCAGTGGACAAGAGGTCATTCAATTTGCTTCCTTCATGA AGTGTTCTCCACCTCCCTTTTTAAAAAGAGTGCAACTTTCTCCTTTAATTTTAGGTATCTGAACGAAATTTGGTAAAATC TTCAATTTCAGGTCTCTGGAGAGTTTTCTGCAGGCTCACCTGAGAGGCTCTCGATGGCATCTCCCACAGCTGGTGGCGGG AAGCGTGTCCATAATCTTCCTTATTCATCTGATGTTAATCAATCTCGTAATTCTCTGATCCTTCTCACCATGCCCATTTT CATCAATTTTTCTTTATCTGATTGTGATTTGAGTTTTTTTGGTTATATTCCCGTGCAGCAAATATCAGGGTCGGGGATTC AGGAGGATTGGGCAATGTAGCATGGAAAGAAAGGGTTGATGGCTGGAAGATGAAGCAAGAAAAGAATGTTGTTCCAATGA GCACTGGCCAGGCTGCTTCTGAAAGAGGAGCTGGAGATATTGATGCCAGTACTGATGTGCTTGTCGATGATTCTCTGTTG TGAGTATTTTTCTTTAGTGCGGCTCCATTTCTATTCGCAGCATCAAATGCCTATTTTTAGTGTCTGTGATTTATACCATA TTTATTGTTATTTTGCTCTTCAGTAGTTAAGAATCTAATATGGTAATATATCATTACTAATACCAGGAAGATTTGGTAAA TACCACTGTTGTATATAAGTTATTTATAGTTCTCAGTTGTTGAATAAGCATATTTGCTCAATTAAGTCTCTTGTTTGTGA ACTCAAATTCTTTGTTATGCAGGAATGACGAAGCTCGACAACCTCTTTCCAGGAAGGTTTCCGTTCCGTCATCAAGAATA AATCCATATCGTATGGTCATTATTCTGCGGCTGATTATCCTTTGCATCTTTTTGCATTATCGAATAACAAATCCAGTGCC CAACGCATATGCATTGTGGTTGATATCTGTCATTTGTGAGATTTGGTTTGCCATATCATGGATATTGGATCAATTCCCTA AGTGGCTTCCTGTAAACCGTGAAACATATCTTGACAGGCTCGCGCTAAGGTAGGGAGTTTAAACTTTACTGTTCTTGTGG TCAAGAAATCATGACATGTGGCATGTATTTTTTCTTTTTTCACCCTGACTTTCTTTTAATACAAAATCCTTGTGTGTTGC AGATATGATCGGGAAGGAGAACCGTCACAGCTTGCAGCTGTTGACATTTTTGTTAGTACGGTTGACCCATTAAAGGAGCC CCCACTTGTCACCGCCAATACCGTACTATCTATTCTTGCAGTTGACTACCCAGTGGATAAGGTCTCCTGCTATGTCTCTG ATGATGGTGCTGCGATGTTGACATTTGAAGCACTTGCTGAGACATCAGAGTTCGCAAGGAAATGGGTTCCTTTCGCCAAA AAGTATAGCATTGAACCCCGTGCACCTGAGTGGTACTTTGCGCTGAAGATTGATTATTTGAAAGATAAGGTTCATCCATC ATTTGTCAAGGATCGTAGAGCAATGAAGGTAACAGGTTGACTCACAACTGTGTTATTCAGTTGGGTTTGCATGCATTCGT TTTATTTGTATTAGTTTTGGATTCTGCAAGGGTATCTTTTAATTTCACTTCCCTATTATGTTTTAGAGAGAATATGAAGA ATTTAAAATTCGTATTAATGGACTGGTTGCGAAGGCATTGAAAGTTCCCGAAGAAGGGTGGGTGATGCAAGATGGTACCC CATGGCCGGGAAATAACACCAGAGACCATCCAGGAATGATCCAGGTTGGTTGAATTCTCGTGATGATGATCACTTCTTAC AACCTGTTATTCATTTATTAGCTTTGAAGCCATCTCTCAAAGTTATTTTGTTCCTAGATAGAGTGCATGCCACATTTTTA GTGATGAAAACATTTGTATAGCAAACTGTTTTCACATGTTACTCTTGTGGACTCTATTTTGTTTGTGCGTGAATTTCTAA CTTTCTGTAGCTAATTACTTATTAATAAGCACTTATCTCCAGCATGTCATTTATCAATATTGCATTCTATTTCATCCGCA GGTCTTCTTGGGCCAAAGTGGTGGACTTGACTCTGATGGTAATGAACTTCCACGTTTAGTCTATGTTTCTCGTGAAAAGC GTCCAAGTTTCCAACATCACAAGAAAGCCGGTGCCATGAATGCCCTTGTGAGTGTCATTTACAATTGAAAATGTGAATGT TACTTATCTCCCTCATGTACATGGAAATATTTTTATAACTGGTGGTGACCCATATAACTTTTGCAGGTTCGAGTATCTGC AGTCCTTACCAATGGACCTTTTTTATTGAATCTTGATTGTGATCACTACATAAACAACAGCAAGGCCTTGAGAGAAGCAA TGTGCTTTATGATGGATCCTAACCTTGGTAAAAATGTTTGCTATGTCCAGTTTCCGCAGAGGTTTGATGGTATTGATAGG AATGATCGATATGCCAATCGTAATACTGTTTTCTTTGATGTAAGTAACTAAGTTTCTTTAACCATACTCGTATTATCTGA TTTTTGTTACTTTTTATTCTTGTTGCCCCATATGGGATTAAAACCTCTTTTTGATACTTACTCAATCTTGAAACTTCCTT AACAGATAAACTTGAGAGGTTTGGATGGCATTCAAGGTCCTGTTTATGTGGGTACTGGGTGTGTCTTCAACAGGACTGCT TTATATGGTTATGAACCTCCTCTTAAACCCAAGCATAAAAAGCCTGGGTTGCTATCATCGCTATTTGGTGGAGATAGAAA GAAGAGCTCAAAATCTAATAAGAAGGGATCAGACAAGAAAAAGTCTAGCAAGCATGTAGACCCAACCGTGCCAATCTTCA GTCTCGAGGATATAGAAGAAGGAGTAGAAGGTAGGCCCGTCAATGTTTTTAATTGGCTCCTCTTTAGATTGCTTTGATAG GTCTACCATTCAATGCGTGTTTGGATTTCCATTGAACTCAACGTGGATCCTCGTTAAACTTACCGCGGTAAAATCTTGCT TCTCCGATCCACATTGAATTCAATGTGGCAAATTCTATCTTCATTGATACCATGATATGTGAAATCACGTTTTCGTTCAC ACCAAAAGCATATACTCAATCTATTTTTTTCACATTTAGTTTTGTTGTCATTTTGCATTGCTAAAATAGAGATCTGTGAC TTGCTTTCCTGCTTCTGTGAGAGCTTCAAATCTGCTTCATATTTTTAATTGATCGTCACATGTTGAAAGTGTTTTTACCT GATCAGACATGTACAAATTTTCCTGCTTTAACCTCTTGGGGTGGCATTACTGTTCTTTAGCAATTGACTAATTTGCTTTC ACTAATTAGACTGTTTCTTCTCATACAACTTTTTCAGGGACTGGATTTGATGATGAGAAATCACTACTTATGTCACAAAT GAGCCTTGAGAAAAGATTCGGTCAGTCTGCTGTTTTCGTAGCCTCTACGCTGATGGAGAATGGTGGTGTTCCTCAGTCTG CTACTCCAGAAATTCTTCTTAAGGAGGCTATTCATGTTATCAGCTGTGGATATGAGGATAAATCAGAATGGGGAACAGAG GTGTGGTTTTATCTTATGTTGAATAATATTTCATGTTTGATTTTGTTCCCATTCTTTCTAATTATTTGAATTGAGCATAT TATTCCCAACAGGTTAGTGCATTCAGAGACCAACAGATTGTATCTCACTGTTTAGTTCAATAGATGTTTACACTGAATAT TGGTGCTGCAATGACTCGTTGATATTAAAAAATAGGATGCATTCATGTAATTATCTTGAAAGTTAAACTACTTTGTCTTC TGTTCTACAGATAGGATGGATTTATGGTTCTGTCACAGAAGATATTCTTACTGGATTCAAGATGCATGCCCGAGGTTGGC GGTCTATATACTGCATGCCTAAGCGCCCAGCATTTAAAGGTTCTGCTCCTATCAATCTTTCGGATCGTCTAAACCAAGTA CTTCGATGGGCTTTAGGATCTGTTGAAATTCTACTAAGCAGACATTGTCCCATCTGGTACGGTTATGGTGGAAGACTAAA GTGGCTCGAACGGTTTGCATATGTGAACACCACAATCTATCCAATCACTGCCATTCCCCTTCTCATGTATTGTACCTTGC CCGCTGTCTGCCTTCTGACCAACAAGTTCATCATTCCCCAGGTTTGTTATTTATTTCTCTATAAAACATACTTCAGTAAC TAAACAAGTGATTAAAGACATTCATAAATGGTTAATATCAATTTTAATCAATCTTTCTCTTGGTTTCATCCAAAATTAGT AACACATTAACTAGGATCTCCAATATTGTAAAAGTCTCCCATGTTCTTTCCTGAAACTACCCCAAAAGCTAGCTTAGGGG TGAGAGTTGTCCTACCATTTGAAAAACACTTATTTGGGATAAAGGCCAACATGTTGTAAAAATATCTCCCATGTTCTTTC AAGAAATTACCCTTATTGAGATTCCACATCGACTAGAGATAAGACAATAGAGCTTATAAAGGCTTTGCCAATCTTGGCCT AGCCCGAATAGGCGAATACTAAGAACTCTCATGAACATGACCTTGTGAATTGAAAAAAAACACATTGTTTTCAACATGTT GCTTATGTAATGCAATATCCAAACTTGTTTTTGTTTGCAGATCAGCAACATTGCAAGTATATGGTTTATCTCTCTCTTTC TTTCCATTTTTGCAACTGGGATCCTTGAGATGAGGTGGAGTGGTGTTGGAATTGATGAGTGGTGGAGGAATGAACAATTC TGGGTTATTGGTGGTGTGTCAGCACATCTCTTTGCTGTGTTCCAAGGTCTACTCAAAGTGCTCGCTGGAATTGACACCAA CTTCACTGTCACCTCCAAGGCATCAGATGAAGATGGCGACTCTGCAGAGCTCTACTTGTTTAAATGGACAACCCTTCTCA TACCCCCCACAACCCTTCTCATAATAAACTTGGTTGGGGTTGTTGCTGGAATTTCCTATGCCATTAACAGTGGTTACCAG TCATGGGGTCCCCTCTTTGGTAAGCTTTTCTTTGCATTTTGGGTCATCATCCATCTCTACCCCTTCCTCAAAGGTCTCAT GGGACGGCAGAACCGAACACCGACCATTGTGGTGGTCTGGTCCATTCTTCTTGCATCCATTTTCTCTCTGTTATGGGTAC GAGTTGATCCGTTCACCACAAGAGTCACCGGTCCTAAGGTTGAGGAGTGTGGAATTAACTGCTAG 

CDS sequence (LotjaGi3g1v0061000.5) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAGTCAGAAGGGGAAGCTGGGGCAAAGCCAATTACAACATCGGGTGCCCAAGTGTGTCAGATCTGTAGTGATAATGT TGGGAAGACTGTGGATGGTGAAGCATTCATTGCTTGTGATGTTTGTGCTTTCCCTGTCTGCAGGCCTTGTTATGAGTATG AGAGGAAAGATGGGAATCAGTCTTGCCCTCAGTGCAAAACCCGGTACAAGAGGCACAAAGGAAGTCCTGCAATTCTTGGA GACAGTGAAGAGGAGGGTGGTGCTGATGATGGTGCTAGTGACTTCAATTATGATTCAGAACATCAAAACCAAAAGCAGAA GATTTCGGAGCGTATGTTGGGCTGGCAATTAACATATGGGCGATCAGAGGAGGTTGGTGCTCCAAATTACGACAAGGAAG TTTCTCACAACCACATTCCTCGGCTGACCAGTGGACAAGAGGTCTCTGGAGAGTTTTCTGCAGGCTCACCTGAGAGGCTC TCGATGGCATCTCCCACAGCTGGTGGCGGGAAGCGTGTCCATAATCTTCCTTATTCATCTGATGTTAATCAATCTCCAAA TATCAGGGTCGGGGATTCAGGAGGATTGGGCAATGTAGCATGGAAAGAAAGGGTTGATGGCTGGAAGATGAAGCAAGAAA AGAATGTTGTTCCAATGAGCACTGGCCAGGCTGCTTCTGAAAGAGGAGCTGGAGATATTGATGCCAGTACTGATGTGCTT GTCGATGATTCTCTGTTGAATGACGAAGCTCGACAACCTCTTTCCAGGAAGGTTTCCGTTCCGTCATCAAGAATAAATCC ATATCGTATGGTCATTATTCTGCGGCTGATTATCCTTTGCATCTTTTTGCATTATCGAATAACAAATCCAGTGCCCAACG CATATGCATTGTGGTTGATATCTGTCATTTGTGAGATTTGGTTTGCCATATCATGGATATTGGATCAATTCCCTAAGTGG CTTCCTGTAAACCGTGAAACATATCTTGACAGGCTCGCGCTAAGATATGATCGGGAAGGAGAACCGTCACAGCTTGCAGC TGTTGACATTTTTGTTAGTACGGTTGACCCATTAAAGGAGCCCCCACTTGTCACCGCCAATACCGTACTATCTATTCTTG CAGTTGACTACCCAGTGGATAAGGTCTCCTGCTATGTCTCTGATGATGGTGCTGCGATGTTGACATTTGAAGCACTTGCT GAGACATCAGAGTTCGCAAGGAAATGGGTTCCTTTCGCCAAAAAGTATAGCATTGAACCCCGTGCACCTGAGTGGTACTT TGCGCTGAAGATTGATTATTTGAAAGATAAGGTTCATCCATCATTTGTCAAGGATCGTAGAGCAATGAAGAGAGAATATG AAGAATTTAAAATTCGTATTAATGGACTGGTTGCGAAGGCATTGAAAGTTCCCGAAGAAGGGTGGGTGATGCAAGATGGT ACCCCATGGCCGGGAAATAACACCAGAGACCATCCAGGAATGATCCAGGTCTTCTTGGGCCAAAGTGGTGGACTTGACTC TGATGGTAATGAACTTCCACGTTTAGTCTATGTTTCTCGTGAAAAGCGTCCAAGTTTCCAACATCACAAGAAAGCCGGTG CCATGAATGCCCTTGTTCGAGTATCTGCAGTCCTTACCAATGGACCTTTTTTATTGAATCTTGATTGTGATCACTACATA AACAACAGCAAGGCCTTGAGAGAAGCAATGTGCTTTATGATGGATCCTAACCTTGGTAAAAATGTTTGCTATGTCCAGTT TCCGCAGAGGTTTGATGGTATTGATAGGAATGATCGATATGCCAATCGTAATACTGTTTTCTTTGATATAAACTTGAGAG GTTTGGATGGCATTCAAGGTCCTGTTTATGTGGGTACTGGGTGTGTCTTCAACAGGACTGCTTTATATGGTTATGAACCT CCTCTTAAACCCAAGCATAAAAAGCCTGGGTTGCTATCATCGCTATTTGGTGGAGATAGAAAGAAGAGCTCAAAATCTAA TAAGAAGGGATCAGACAAGAAAAAGTCTAGCAAGCATGTAGACCCAACCGTGCCAATCTTCAGTCTCGAGGATATAGAAG AAGGAGTAGAAGGGACTGGATTTGATGATGAGAAATCACTACTTATGTCACAAATGAGCCTTGAGAAAAGATTCGGTCAG TCTGCTGTTTTCGTAGCCTCTACGCTGATGGAGAATGGTGGTGTTCCTCAGTCTGCTACTCCAGAAATTCTTCTTAAGGA GGCTATTCATGTTATCAGCTGTGGATATGAGGATAAATCAGAATGGGGAACAGAGATAGGATGGATTTATGGTTCTGTCA CAGAAGATATTCTTACTGGATTCAAGATGCATGCCCGAGGTTGGCGGTCTATATACTGCATGCCTAAGCGCCCAGCATTT AAAGGTTCTGCTCCTATCAATCTTTCGGATCGTCTAAACCAAGTACTTCGATGGGCTTTAGGATCTGTTGAAATTCTACT AAGCAGACATTGTCCCATCTGGTACGGTTATGGTGGAAGACTAAAGTGGCTCGAACGGTTTGCATATGTGAACACCACAA TCTATCCAATCACTGCCATTCCCCTTCTCATGTATTGTACCTTGCCCGCTGTCTGCCTTCTGACCAACAAGTTCATCATT CCCCAGATCAGCAACATTGCAAGTATATGGTTTATCTCTCTCTTTCTTTCCATTTTTGCAACTGGGATCCTTGAGATGAG GTGGAGTGGTGTTGGAATTGATGAGTGGTGGAGGAATGAACAATTCTGGGTTATTGGTGGTGTGTCAGCACATCTCTTTG CTGTGTTCCAAGGTCTACTCAAAGTGCTCGCTGGAATTGACACCAACTTCACTGTCACCTCCAAGGCATCAGATGAAGAT GGCGACTCTGCAGAGCTCTACTTGTTTAAATGGACAACCCTTCTCATACCCCCCACAACCCTTCTCATAATAAACTTGGT TGGGGTTGTTGCTGGAATTTCCTATGCCATTAACAGTGGTTACCAGTCATGGGGTCCCCTCTTTGGTAAGCTTTTCTTTG CATTTTGGGTCATCATCCATCTCTACCCCTTCCTCAAAGGTCTCATGGGACGGCAGAACCGAACACCGACCATTGTGGTG GTCTGGTCCATTCTTCTTGCATCCATTTTCTCTCTGTTATGGGTACGAGTTGATCCGTTCACCACAAGAGTCACCGGTCC TAAGGTTGAGGAGTGTGGAATTAACTGCTAG 

Protein sequence (LotjaGi3g1v0061000.5) extracted from Lotus japonicus Gifu v1.2 Proteins.

MESEGEAGAKPITTSGAQVCQICSDNVGKTVDGEAFIACDVCAFPVCRPCYEYERKDGNQSCPQCKTRYKRHKGSPAILG DSEEEGGADDGASDFNYDSEHQNQKQKISERMLGWQLTYGRSEEVGAPNYDKEVSHNHIPRLTSGQEVSGEFSAGSPERL SMASPTAGGGKRVHNLPYSSDVNQSPNIRVGDSGGLGNVAWKERVDGWKMKQEKNVVPMSTGQAASERGAGDIDASTDVL VDDSLLNDEARQPLSRKVSVPSSRINPYRMVIILRLIILCIFLHYRITNPVPNAYALWLISVICEIWFAISWILDQFPKW LPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALA ETSEFARKWVPFAKKYSIEPRAPEWYFALKIDYLKDKVHPSFVKDRRAMKREYEEFKIRINGLVAKALKVPEEGWVMQDG TPWPGNNTRDHPGMIQVFLGQSGGLDSDGNELPRLVYVSREKRPSFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYI NNSKALREAMCFMMDPNLGKNVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEP PLKPKHKKPGLLSSLFGGDRKKSSKSNKKGSDKKKSSKHVDPTVPIFSLEDIEEGVEGTGFDDEKSLLMSQMSLEKRFGQ SAVFVASTLMENGGVPQSATPEILLKEAIHVISCGYEDKSEWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAF KGSAPINLSDRLNQVLRWALGSVEILLSRHCPIWYGYGGRLKWLERFAYVNTTIYPITAIPLLMYCTLPAVCLLTNKFII PQISNIASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDED GDSAELYLFKWTTLLIPPTTLLIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVV VWSILLASIFSLLWVRVDPFTTRVTGPKVEECGINC 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 1074 1074 0.0
Phobius 1 267 267 -
PANTHER 1 1074 1074 0.0
Gene3D 2 95 94 3.2E-40
SUPERFAMILY 5 86 82 2.35E-33
Pfam 10 85 76 4.3E-38
CDD 18 68 51 1.95819E-33
ProSiteProfiles 20 66 47 8.506
MobiDBLite 73 109 37 -
MobiDBLite 144 171 28 -
Phobius 268 287 20 -
TMHMM 271 288 18 -
Phobius 288 293 6 -
Phobius 294 314 21 -
TMHMM 295 314 20 -
Phobius 315 853 539 -
Pfam 348 1069 722 0.0
SUPERFAMILY 362 888 527 3.6E-10
Gene3D 466 638 173 2.5E-14
MobiDBLite 647 680 34 -
TMHMM 852 874 23 -
Phobius 854 874 21 -
Phobius 875 885 11 -
Phobius 886 904 19 -
TMHMM 886 908 23 -
Phobius 905 923 19 -
TMHMM 923 945 23 -
Phobius 924 946 23 -
Phobius 947 966 20 -
Phobius 967 995 29 -
TMHMM 971 993 23 -
Phobius 996 1006 11 -
TMHMM 1003 1025 23 -
Phobius 1007 1025 19 -
Phobius 1026 1036 11 -
Phobius 1037 1057 21 -
TMHMM 1038 1057 20 -
Phobius 1058 1076 19 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Cellular component Membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
Molecular function Cellulose synthase (UDP-forming) activity Catalysis of the reaction: UDP-glucose + ((1,4)-beta-D-glucosyl)(n) = UDP + ((1,4)-beta-D-glucosyl)(n+1).
Biological process Cellulose biosynthetic process The chemical reactions and pathways resulting in the formation of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation.

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0061000.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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