Domain Predictions — View

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cd16617

Source: CDD

Description

mRING-HC-C4C4_CesA_plant

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 21

Transcript	Name	Description	Predicted domains	Domain count
LotjaGi1g1v0314700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cellulose synthase; TAIR: AT5G64740.1 cellulose synthase 6; Swiss-Prot: sp\|Q94JQ6\|CESA6_ARATH Cellulose synthase A catalytic subunit 6 [UDP]-forming]; TrEMBL-Plants: tr\|V7CR17\|V7CR17_PHAVU Cellulose synthase; Found in the gene: LotjaGi1g1v0314700	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 G3DSA:3.90.550.10 IPR001841 IPR005150 IPR013083 IPR027934 IPR029044 NON_CYTOPLASMIC_DOMAIN PF03552 PF14569 PS50089 PTHR13301 PTHR13301:SF167 SSF53448 SSF57850 TMhelix TRANSMEMBRANE cd16617	19
LotjaGi1g1v0385400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cellulose synthase; TAIR: AT4G32410.1 cellulose synthase 1; Swiss-Prot: sp\|O48946\|CESA1_ARATH Cellulose synthase A catalytic subunit 1 [UDP]-forming]; TrEMBL-Plants: tr\|A0A151TT19\|A0A151TT19_CAJCA Cellulose synthase; Found in the gene: LotjaGi1g1v0385400	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:3.30.40.10 G3DSA:3.90.550.10 IPR001841 IPR005150 IPR013083 IPR027934 IPR029044 NON_CYTOPLASMIC_DOMAIN PF03552 PF14569 PS50089 PTHR13301 PTHR13301:SF146 SSF53448 SSF57850 TMhelix TRANSMEMBRANE cd16617 mobidb-lite	21
LotjaGi3g1v0061000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cellulose synthase; TAIR: AT5G05170.1 Cellulose synthase family protein; Swiss-Prot: sp\|Q941L0\|CESA3_ARATH Cellulose synthase A catalytic subunit 3 [UDP]-forming]; TrEMBL-Plants: tr\|A0A0S3S8T1\|A0A0S3S8T1_PHAAN Cellulose synthase; Found in the gene: LotjaGi3g1v0061000	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 G3DSA:3.90.550.10 IPR001841 IPR005150 IPR013083 IPR027934 IPR029044 NON_CYTOPLASMIC_DOMAIN PF03552 PF14569 PS50089 PTHR13301 PTHR13301:SF166 SSF53448 SSF57850 TMhelix TRANSMEMBRANE cd16617 mobidb-lite	20
LotjaGi3g1v0061000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cellulose synthase; TAIR: AT5G05170.1 Cellulose synthase family protein; Swiss-Prot: sp\|Q941L0\|CESA3_ARATH Cellulose synthase A catalytic subunit 3 [UDP]-forming]; TrEMBL-Plants: tr\|A0A0S3S8T1\|A0A0S3S8T1_PHAAN Cellulose synthase; Found in the gene: LotjaGi3g1v0061000	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 G3DSA:3.90.550.10 IPR001841 IPR005150 IPR013083 IPR027934 IPR029044 NON_CYTOPLASMIC_DOMAIN PF03552 PF14569 PS50089 PTHR13301 PTHR13301:SF166 SSF53448 SSF57850 TMhelix TRANSMEMBRANE cd16617 mobidb-lite	20
LotjaGi3g1v0061000.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cellulose synthase; TAIR: AT5G05170.1 Cellulose synthase family protein; Swiss-Prot: sp\|Q941L0\|CESA3_ARATH Cellulose synthase A catalytic subunit 3 [UDP]-forming]; TrEMBL-Plants: tr\|A0A0S3S8T1\|A0A0S3S8T1_PHAAN Cellulose synthase; Found in the gene: LotjaGi3g1v0061000	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 G3DSA:3.90.550.10 IPR001841 IPR005150 IPR013083 IPR027934 IPR029044 NON_CYTOPLASMIC_DOMAIN PF03552 PF14569 PS50089 PTHR13301 PTHR13301:SF166 SSF53448 SSF57850 TMhelix TRANSMEMBRANE cd16617 mobidb-lite	20
LotjaGi3g1v0061000.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cellulose synthase; TAIR: AT5G05170.1 Cellulose synthase family protein; Swiss-Prot: sp\|Q941L0\|CESA3_ARATH Cellulose synthase A catalytic subunit 3 [UDP]-forming]; TrEMBL-Plants: tr\|A0A0S3S8T1\|A0A0S3S8T1_PHAAN Cellulose synthase; Found in the gene: LotjaGi3g1v0061000	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 G3DSA:3.90.550.10 IPR001841 IPR005150 IPR013083 IPR027934 IPR029044 NON_CYTOPLASMIC_DOMAIN PF03552 PF14569 PS50089 PTHR13301 PTHR13301:SF166 SSF53448 SSF57850 TMhelix TRANSMEMBRANE cd16617 mobidb-lite	20
LotjaGi3g1v0099900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cellulose synthase; TAIR: AT2G21770.1 cellulose synthase A9; Swiss-Prot: sp\|Q69V23\|CESA3_ORYSJ Probable cellulose synthase A catalytic subunit 3 [UDP]-forming]; TrEMBL-Plants: tr\|A0A151SXB6\|A0A151SXB6_CAJCA Cellulose synthase; Found in the gene: LotjaGi3g1v0099900	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:3.30.40.10 G3DSA:3.90.550.10 IPR001841 IPR005150 IPR013083 IPR027934 IPR029044 NON_CYTOPLASMIC_DOMAIN PF03552 PF14569 PS50089 PTHR13301 PTHR13301:SF81 SSF53448 SSF57850 TMhelix TRANSMEMBRANE cd16617	20
LotjaGi3g1v0122500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cellulose synthase; TAIR: AT5G05170.1 Cellulose synthase family protein; Swiss-Prot: sp\|Q941L0\|CESA3_ARATH Cellulose synthase A catalytic subunit 3 [UDP]-forming]; TrEMBL-Plants: tr\|A0A1J7I388\|A0A1J7I388_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0122500	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 G3DSA:3.90.550.10 IPR001841 IPR005150 IPR013083 IPR027934 IPR029044 NON_CYTOPLASMIC_DOMAIN PF03552 PF14569 PS50089 PTHR13301 PTHR13301:SF166 SSF53448 SSF57850 TMhelix TRANSMEMBRANE cd16617 mobidb-lite	20
LotjaGi3g1v0122500.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cellulose synthase; TAIR: AT5G05170.1 Cellulose synthase family protein; Swiss-Prot: sp\|Q941L0\|CESA3_ARATH Cellulose synthase A catalytic subunit 3 [UDP]-forming]; TrEMBL-Plants: tr\|A0A1J7I388\|A0A1J7I388_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0122500	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 G3DSA:3.90.550.10 IPR001841 IPR005150 IPR013083 IPR027934 IPR029044 NON_CYTOPLASMIC_DOMAIN PF03552 PF14569 PS50089 PTHR13301 PTHR13301:SF166 SSF53448 SSF57850 TMhelix TRANSMEMBRANE cd16617 mobidb-lite	20
LotjaGi3g1v0122500.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cellulose synthase; TAIR: AT5G05170.1 Cellulose synthase family protein; Swiss-Prot: sp\|Q941L0\|CESA3_ARATH Cellulose synthase A catalytic subunit 3 [UDP]-forming]; TrEMBL-Plants: tr\|A0A1J7I388\|A0A1J7I388_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0122500	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 G3DSA:3.90.550.10 IPR001841 IPR005150 IPR013083 IPR027934 IPR029044 NON_CYTOPLASMIC_DOMAIN PF03552 PF14569 PS50089 PTHR13301 PTHR13301:SF166 SSF53448 SSF57850 TMhelix TRANSMEMBRANE cd16617 mobidb-lite	20
LotjaGi3g1v0122500.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cellulose synthase; TAIR: AT5G05170.1 Cellulose synthase family protein; Swiss-Prot: sp\|Q941L0\|CESA3_ARATH Cellulose synthase A catalytic subunit 3 [UDP]-forming]; TrEMBL-Plants: tr\|A0A1J7I388\|A0A1J7I388_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0122500	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 G3DSA:3.90.550.10 IPR001841 IPR005150 IPR013083 IPR027934 IPR029044 NON_CYTOPLASMIC_DOMAIN PF03552 PF14569 PS50089 PTHR13301 PTHR13301:SF166 SSF53448 SSF57850 TMhelix TRANSMEMBRANE cd16617 mobidb-lite	20
LotjaGi4g1v0406300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cellulose synthase; TAIR: AT5G64740.1 cellulose synthase 6; Swiss-Prot: sp\|Q94JQ6\|CESA6_ARATH Cellulose synthase A catalytic subunit 6 [UDP]-forming]; TrEMBL-Plants: tr\|V7CR17\|V7CR17_PHAVU Cellulose synthase; Found in the gene: LotjaGi4g1v0406300	Domains CYTOPLASMIC_DOMAIN G3DSA:3.30.40.10 G3DSA:3.90.550.10 IPR001841 IPR005150 IPR013083 IPR027934 IPR029044 NON_CYTOPLASMIC_DOMAIN PF03552 PF14569 PS50089 PTHR13301 PTHR13301:SF167 SSF53448 SSF57850 TMhelix TRANSMEMBRANE cd16617 mobidb-lite	20
LotjaGi5g1v0289500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cellulose synthase; TAIR: AT5G64740.1 cellulose synthase 6; Swiss-Prot: sp\|Q94JQ6\|CESA6_ARATH Cellulose synthase A catalytic subunit 6 [UDP]-forming]; TrEMBL-Plants: tr\|A0A0L9TZ92\|A0A0L9TZ92_PHAAN Cellulose synthase; Found in the gene: LotjaGi5g1v0289500	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:3.30.40.10 G3DSA:3.90.550.10 IPR005150 IPR013083 IPR027934 IPR029044 NON_CYTOPLASMIC_DOMAIN PF03552 PF14569 PTHR13301 PTHR13301:SF151 SSF53448 SSF57850 TMhelix TRANSMEMBRANE cd16617 mobidb-lite	19
LotjaGi5g1v0289500.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cellulose synthase; TAIR: AT5G64740.1 cellulose synthase 6; Swiss-Prot: sp\|Q94JQ6\|CESA6_ARATH Cellulose synthase A catalytic subunit 6 [UDP]-forming]; TrEMBL-Plants: tr\|A0A0L9TZ92\|A0A0L9TZ92_PHAAN Cellulose synthase; Found in the gene: LotjaGi5g1v0289500	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:3.30.40.10 G3DSA:3.90.550.10 IPR005150 IPR013083 IPR027934 IPR029044 NON_CYTOPLASMIC_DOMAIN PF03552 PF14569 PTHR13301 PTHR13301:SF151 SSF53448 SSF57850 TMhelix TRANSMEMBRANE cd16617 mobidb-lite	19
LotjaGi6g1v0183200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cellulose synthase; TAIR: AT4G32410.1 cellulose synthase 1; Swiss-Prot: sp\|O48946\|CESA1_ARATH Cellulose synthase A catalytic subunit 1 [UDP]-forming]; TrEMBL-Plants: tr\|Q8GRY7\|Q8GRY7_LOTJA BZIP with a Ring-finger motif; Found in the gene: LotjaGi6g1v0183200	Domains Coil G3DSA:1.20.5.490 G3DSA:3.30.40.10 IPR001841 IPR004827 IPR013083 IPR027934 PF00170 PF14569 PS00036 PS50089 PS50217 PTHR46714 PTHR46714:SF6 SM00338 SSF57850 SSF57959 cd14704 cd16617 mobidb-lite	20
LotjaGi6g1v0201500.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cellulose synthase; TAIR: AT5G17420.1 Cellulose synthase family protein; Swiss-Prot: sp\|Q9SWW6\|CESA7_ARATH Cellulose synthase A catalytic subunit 7 [UDP]-forming]; TrEMBL-Plants: tr\|A0A1J7HDL1\|A0A1J7HDL1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0201500	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:3.30.40.10 G3DSA:3.90.550.10 IPR005150 IPR013083 IPR027934 IPR029044 NON_CYTOPLASMIC_DOMAIN PF03552 PF14569 PTHR13301 PTHR13301:SF181 SSF53448 SSF57850 TMhelix TRANSMEMBRANE cd16617 mobidb-lite	19
LotjaGi6g1v0201500.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cellulose synthase; TAIR: AT5G17420.1 Cellulose synthase family protein; Swiss-Prot: sp\|Q9SWW6\|CESA7_ARATH Cellulose synthase A catalytic subunit 7 [UDP]-forming]; TrEMBL-Plants: tr\|G7LFG6\|G7LFG6_MEDTR Cellulose synthase; Found in the gene: LotjaGi6g1v0201500	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:3.30.40.10 G3DSA:3.90.550.10 IPR005150 IPR013083 IPR027934 IPR029044 NON_CYTOPLASMIC_DOMAIN PF03552 PF14569 PTHR13301 PTHR13301:SF181 SSF53448 SSF57850 TMhelix TRANSMEMBRANE cd16617 mobidb-lite	19
LotjaGi6g1v0201500.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cellulose synthase; TAIR: AT5G17420.1 Cellulose synthase family protein; Swiss-Prot: sp\|Q9SWW6\|CESA7_ARATH Cellulose synthase A catalytic subunit 7 [UDP]-forming]; TrEMBL-Plants: tr\|A0A1J7HDL1\|A0A1J7HDL1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0201500	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:3.30.40.10 G3DSA:3.90.550.10 IPR005150 IPR013083 IPR027934 IPR029044 NON_CYTOPLASMIC_DOMAIN PF03552 PF14569 PTHR13301 PTHR13301:SF181 SSF53448 SSF57850 TMhelix TRANSMEMBRANE cd16617 mobidb-lite	19
LotjaGi6g1v0201500.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cellulose synthase; TAIR: AT5G17420.1 Cellulose synthase family protein; Swiss-Prot: sp\|Q9SWW6\|CESA7_ARATH Cellulose synthase A catalytic subunit 7 [UDP]-forming]; TrEMBL-Plants: tr\|G7LFG6\|G7LFG6_MEDTR Cellulose synthase; Found in the gene: LotjaGi6g1v0201500	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:3.30.40.10 G3DSA:3.90.550.10 IPR005150 IPR013083 IPR027934 IPR029044 NON_CYTOPLASMIC_DOMAIN PF03552 PF14569 PTHR13301 PTHR13301:SF181 SSF53448 SSF57850 TMhelix TRANSMEMBRANE cd16617 mobidb-lite	19
LotjaGi6g1v0244300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cellulose synthase; TAIR: AT5G44030.1 cellulose synthase A4; Swiss-Prot: sp\|Q84JA6\|CESA4_ARATH Cellulose synthase A catalytic subunit 4 [UDP]-forming]; TrEMBL-Plants: tr\|A0A1J7FVN2\|A0A1J7FVN2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0244300	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:3.30.40.10 G3DSA:3.90.550.10 IPR005150 IPR013083 IPR027934 IPR029044 NON_CYTOPLASMIC_DOMAIN PF03552 PF14569 PTHR13301 PTHR13301:SF81 SSF53448 SSF57850 TMhelix TRANSMEMBRANE cd16617 mobidb-lite	19
LotjaGi6g1v0244300.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Cellulose synthase; TAIR: AT5G44030.1 cellulose synthase A4; Swiss-Prot: sp\|Q84JA6\|CESA4_ARATH Cellulose synthase A catalytic subunit 4 [UDP]-forming]; TrEMBL-Plants: tr\|G7INF0\|G7INF0_MEDTR Cellulose synthase; Found in the gene: LotjaGi6g1v0244300	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:3.30.40.10 G3DSA:3.90.550.10 IPR005150 IPR013083 IPR027934 IPR029044 NON_CYTOPLASMIC_DOMAIN PF03552 PF14569 PTHR13301 PTHR13301:SF81 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF53448 SSF57850 SignalP-noTM TMhelix TRANSMEMBRANE cd16617	23

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd16617	CDD	1	4.76