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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0073000 |
| Transcript ID | LotjaGi3g1v0073000.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Dynamin, putative; TAIR: AT3G60190.1 DYNAMIN-like 1E; Swiss-Prot: sp|Q9FNX5|DRP1E_ARATH Dynamin-related protein 1E; TrEMBL-Plants: tr|A0A151SN43|A0A151SN43_CAJCA Dynamin-related protein 1E; Found in the gene: LotjaGi3g1v0073000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:7997406..8004888) extracted from Lotus japonicus Gifu genome v1.2.
ACCATCATCTTCATGGAGAGCTTAATCGGCTTGGTCAACAGAATCCAGCAAGCTTGCACCAAGCTCGGTGACTACGGCGG TGCCGACAACAACAACTTCGCCGCCTCTCTCTGGGAAGCTCTCCCTTCCGTCGCCGTCGTCGGTGGCCAGGTAACCGTCA CCATCCAAAATTCGAATTCATCTCGTTTTCCTCTTCCTCTTCTCAAACTCAACAATCTTCCTTCTCAAACAGAGTTCCGG TAAATCTTCTGTTCTGGAAAGCATCGTTGGACGCGATTTTCTGCCTCGAGGATCAGGTTAGTTAATTCAGTTATTTCTCG CTTGCGTTTCTATAATCAGTTATCGAAGCAGTTAGAAGTTAGTTTTGGTTGTTATAGTTAGTTATAGTCAGTTATGAGTT GGTTTTGGTTAAGCTAGTTAGATTGGGATTCTTCTTGTTTTTCAACAAGTTAGAAGCTAGTTTTGATAGATATGGTGGTA GTTATCTCAGTTTGCTGAAGTTGCTATTTTCTGTTCATGTATAAGATGTGAATTTGTACCGGAGAAATTGCGATGAAGAT GAATAGCACTAGTACTTTCGCGCTCAATTCACTATTCTAATAATGCGTTTCGAGTGTTGGTGTGTGTACCTGAATTTGAA TTGCAGGGATTGTGACGAGACGTCCATTGGTGTTGCAGCTTCATAAGCTAGACGATGACACGGAGGAATATGCTGAGTTT CTTCACATGCCAGGGAGAAAGCTAACCAATTATGGTAACCTTTAATTTTGTGTTTTTAAGTTTATTTTTGTATCTCATGT CAGCATGATTTATTAAGCACTTTACTTACACTAGTTGAGACTTGAGACCTGTGTTGTAATTGTAATGCGTATTCGATAAT TATAGGAGTCACATGGCATGGGCTTTTAGTTTCCCCTGTTTTTGGGGTTGCTTGTGTTATGACCGGAATTTTTTCGTGCT CGTTTCCATGTTAGTGTTGTGACTATATCTTGTGATTTTTTTTAAGGTTATATATACCTGCATTACCAGCCTCCTTCATG TTTCAATTGTTATGTGGTGTGTGCCTTCCTGCCCTAGAACTGTGGTATGGGGGTTGATTGTATGCTTTACTATTGGACTT GTTTCCAACTATACTCTGCCACAGCATTATTCTTTCTAGTAATTTGCTTTTTCCTTTATCCATGAACTAATAATTTTCTA GCAATTTATCATGTGATCAATGTGGTGCTGACTTACTGTTGCAATGGTTTGTATGCTTTTGCTTTCTCCTTTTCCTATTT ATCCTATTCTATAGTTTATGAATATAAATATGTCCATGCCTTTTTTATTTGAAATTTTGTTTTTCATTTTGCAGCCCAAG TCCGCCAGGAAATTCAGGATGAAACTGATAGATTAACGGGAAAGTCAAAACAAATATCTAATGTTCCAATTCATCTTAGC ATTTATTCTCCTCATGGTGCGCTTCAAGCTCTTTGATATAATTTTCTAGATGGTTTTCTTTAAGCTTGTGTGTGTCACTT TTGTAGTTTATTTTGAATCAAGGAAAACTATTACTGAAATTACTGAAATAGAGAAAAGAGGACAAAACTGAGGCAATAGT ATTCTGCCACAAAAATTGAATGGAACTGAGTGCAGTAGCCCAAATAGTGTGTTAATCAATTTAACAACTCCCTACAATCT CTTAGCATATCTGTGAAGTAAACTCCCTCATAACAATAATTAGCTGAACATCATAAGGAATTCTCTGCTATATTGTGTGT GAGGTGCACAGAAAGAAAATCTTATGTGTTTGTCGGGCCAGCCCAAGGCTTCTTCAAAATGCCAAAGGCCCAATTGCTGT ATTTCATAAACTAATAAAATATATCACTCAGACATGAAGGGCTAATGCTGGCCTTTGTACTCAAGCAAGTCATCATTCAT TATTGTTACTTGTTAGTTAAATAAATGCAATGTTTCAAATGTAAAGTAACACCCTAAGTGGAACGTTAGGGTTACCTGAA GTGTAGCAATATTCTTGTAGAATTATATATGTTTGTAAGCTTTGGGGTTAGGGGAAGGTAAGGGAGTGGAATGGATGGGG TAGGGGGATTACTTTCTCCCTTGTTTGGATATTTATGTTATGGAAAGTAGATATTTCTTCCCTTTGACTGGTACTCAAAA ATTAAAGTTGCTGGAACTTTCAAGTGTTGAAATTAAATTTTCACTACAGTCATTATGTAGCAATTTTATAACAGGCCTTA AGGTTGTGTATGTAATTTAATAATATCGAGAGGAGGACATCAAGGGGAAAGGCATCCCAATTCCTTCCTCTTGTCTTGCT ATCCTTGTAGATCTTCTAAACCCTCGAGTCATGATTCCCTCCTTATTAATTTGTGATCCAAACATAACATCAAGGATCTG AAAGGATCTACAAAAGAACCAGAGTGTTGAGAAGTCTCACATTTACTACAGATATGGCCAAATAAATCTTTATAAATGGT AGAGCAATCCTCACCCTAAGCTTGCTTTCGGGATAGAGTTAGACCTAACCTGAATTCTAATACAGAGGAATCTAGAAATC TAGACTCTTCTATCTGTATCTGAATGTGAGCAAACATAGTCAAGTAAATACAAATGTGATAATAAACCAGAGGCCTCCTA TAATTATAATTCCTAGACAATGGAAAATTCTAGAGACCTTATCAAATGCTATAATCTGAGTGATCAGGGAAGAAATAGAA AAGAAATACTGAATAGCAAAGGGAAAACCTCAAAGAAAAGAATCTCACAATCTGTATATTTTGAAAAACCTGAGCATGAA TTGTTGGTTTAACATTCTAAATACTTTGATAAACAATATGGTTATTATGGCTGGAAAGTGGACTTAGAAGCTGCTTATCT AAATTTCCCATTGTAGTTTCACCTTAACGTATTCAGGCCCATAAACTTGTAATATAAAGTTTCCCTCCTTTTCTTCTTTT GCCTTTCTTCCACGTCTTCCTACATAGGGTGCTGAAACCTACTTCACCAGTTGTTTGCTTCCTGTATAATAGAGCATAAT TAGTGCCTCCTTTAGCAGGAGCTATGCTAACCTGCTCGCTAGGAAGCTGCAGCTACCTTTTTTGCAATTAACTCTAGAAT GTTTTCCTTTGTTTGTGTTGCAGAACAGCACTTGCCATCTTTTAATTAATTTATATATTTTCCATTTATTAATTTTCTAA GTGTATTTAACTTTGTATTCTTTAGATTTGATGCATAATTATATGTCATTAAATGAGACCAGTAATTGAATTGTTATTTG AAGTTTACCTATCATATTTCTTGTGTTTTCTAATTCAATTTCTCTGTTTGTTTGGGCAGTTGTCAACCTAACTTTGATTG ATTTACCAGGGTTGACTAAAGTTGCCATAGGTATAATTTGCATTCAATTATTAATTATAAATAATTTTATTTTGGATAAC ATGATGCCACTTTTTATTTGAAGTGATTAACAACTATGGCAATTTCAGAGGGACAGCCTGAGACAATTGCTGAAGACATT GAAAATATGGTTCGATCTTATGTTGAGAAGGTATTGTCTTAATTTCTTCTCACTCTTCCTGTTTAATATATTAATTGAAT GATGCACCATAATTTCATTTGACAGAATATTTATTGTACAAGAATAAGACCTACGATGTTGCATGATATGGATGCTGGGA GGTAAAAAGTCTAATGTGAAAGTAAGCTTAATGTTGCAAAGATGACAAATGTTAGCTTGGACGAATGTTCACACAATACA ATAAAATTAGAAATGAAAGCATTCGCGAGAAAGTCGGTTGGGGCATGTTTGAAGAAGACTCGTAGATGTACCAATAAATG GTCCAATAGTTAAAGATGGAGAGATTTGTATTTAAATGGTCTATCAGTAGACGTGGTTTGAATAGGATATTATGGCATCA TTTGATCCATTTAACTGACCCCACCTAGTGGAACAAAGCTTTAGTTGTTGCTGTTAATGCTGTTTTCTTTTATATGTATT GCACTTGCGTTCATATTTCCAAACAAATTCCTTTCTCCGTTTCTATTTATTGTGACTACCATTTTATTACCTAATTGAAG TGCTTATTAATGATACGTTAGCAAGCGATGCTGTTAATGTATATATTCGCTTTAACCAATACTTTGTGCTTTTGACAGCC TAATTCGATCATATTGGCAATATCTCCCGCCAACCAAGACATAGCAACTTCTGATGCAATCAAACTTGCCAGGGAAGTAG ATCCCTCAGGTACTCAAATGTTCCATGGAATGATTTCTTATTTGCTTTGTTTGGGTTATCTTTGTCACTAAAATCCTTGT CTGTAAACTGCCTAGGTGAGAGAACATTTGGAGTTTTGACAAAACTGGATTTGATGGACAAAGGAACTAACGCATTGGAT GTAAAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATGTTCACTTCATCCCTTGTATAACTAGTTTTTCTTTT ACCCATTTTTATTCCCATAAGGTCCTTGAAGGAAGATCTTATCGCTTGCAACTTCCGTGGGTTGGTATAGTAAATCGATC CCAAGCAGATATCAATAAAAATGTTGATATGATTGTTGCCAGACGCAGGGAGCGTGAGTATTTTGCAACCAGTCCTGACT ATGGGCACTTGGCTCATAAAATGGGCTCAGAATACCTTGCAAAACTTCTCTCACAGGTTTGGTTTTTGGAAAGTTGCTGT TTTCCCTTCATTTATTAAATATGATATCATCTGAATCAAGTTAGACTATTTTGTAGCACTTGGAGTCAGTAATTAAGGCG CGGATACCTAGTATAACATCTTTGATAAACAAAAGCATTGAAGAACTTGAATCGGAGATGGATCATCTTGGGAGACCAAT TGCTGTTGATGCTGGGGTGAGTGCTTTTACATTTTTGGTTATTTCAGAAAGAGTTCAATCTTTCTATTATATCCTTCAGA ACACTATTTCATCTGTACTTTCTCTTTTAGGCTCAACTGTACACCATCCTAGACCTTTGCCGCGCATTTGAACGGATATT CAAGGAGCATTTAGATGGAGGGTAAATATATGTTGCCATACTCAACTTTTACTCTATTATACTAGCTTATTTGAATTTTT TGGGTGGACTGCCTCTTGTGATTGTAACTTGTCTGCTTTCAGTCCATCATTGAGGGATTGATAGTTATTTTGGGTTCAAG ATTTTTTTTCCAGCTTCCTGAGAGAGCTTTTAAAAGAGAGCGACCATTTTCCTAAAATCATCTGTTACACACTTCAAATA ACTTCTATATTTCCACACCAGCACATCTACTTTTTCTTGGACCTCACTTCCACTATCTATATCTTATTTTCATATCATAT TATTCATGTCTCTATTTAGTATTTACTATTCCTATTTCTCTTTATAAGATGGAGGTGGAATAACTGTGGCAATAACTTAT TTCCTACTTCAAATAGGACATTTAATTTTTTTACTATAATAATCATTCATGAATTTGATTTGATGTCCAATAGTGCTTTA TTTGTTCGGTGAGCGAAATCCAACTTTAATATCATGTGTGGATTAGCTTTTATTCCCTCATAATCAATTCTGAAATCCAG AAGTGTCTCCCTATATTTGATTCTGACTTTAGAATAACTTGTACAAGGATTTTCATACATGTTGGTTCTGGTTCGTTTCT ATAAAATATACTTATACAGCTAAGCAAAGTCATGAGAAAGATTTATTGTACCAGATGAATGTTGAGCAATTTGGAATGAT TGTTATGAAGTCAGCTTGTTATCTGTTGAACAAATTGGCAGGTTACATAATCTCTCTCGTTTATAATTGTCATAGGCGGG CAGGAGGAGATAGGATATATAATGTCTTTGACAATCAGCTTCCTGCTGCTCTACGGAAGCTTCCAATTGACAGACATCTT TCTCTTCAGAATGTCAAGAAAGTGGTGTCCGAGGCAGATGGTTACCAGCCTCACTTAATTGCCCCAGAGCAAGGTTACCG GCGCCTTATTGAGGGGGCTCTCAGTTACTTCAGAGGCCCAGCTGAAGCTTCAGTTGACGCAGTAAGAATTCCTGGTTGTT TTTTGTATTTGTTGTTATTTTAAAGCTAAATCAATAATATCATGTTTGGTTCCACAAGTGAAATGCTTTAAAATTACTTC TGGTTAGACTGCTATTTTTGAAACTTAACATGCACTAAGCTAAAAAAATTAAGCTGTATTTGTACGATTTGGATGTAGGT TCACTTTGTCTTGAAAGAACTTGTGAGGAAATCATTAGCTGAAACTCAGGTAAAATCTTGGGATACATCCATTTTATAGT AACCCTGTTGGTGAAATACTGGAATACTTAATGAAGCAAGGAATTTGTGTTTGAATAGGAACTGAAACGTTTCCCAACTC TTCAAGCGGAAATAGCCTCAGCTACAAGTGAGGCTTTGGAGAGGTTCCGTGACGAGAGCAAGAAGACAACAGTTCGGCTC GTGGATATGGAAGCTTCGTACCTCACTGTGGATTTCTTCCGAAGACTTCCTGAAGAAATGGAGAGAGCTGGAAATCCCTC AAATCCGGCTGATCGTGCTAATCCGCCTAATCGTGCTAATCCTGCCAATCAAGCTGCCCCAAATGTGGATCGATATGGAG AAGGACATTTTAGGAGGATTGGATCAAATGTGTCATCCTATATAGGAATGGTGTCAGACACACTAAGAAACACGATTCCA AAGGCTGTGGTTTATTGTCAGGTCAGACAAGCAAAACTGTCATTGCTAAACCATTTCCTTACACAAATAGGACAGAAAGA GGTATTTTCTCATTCCCTTTCTTTGCATTTGAAACTTCGGATTTATCTTTAACGTCCACCTTTGTTGGTAGCAAAAGCAT CGTAGTTTATACTTTATAGTTTATACTTCTGTTGGAGCTGTGCAATACTTTTGGTAAAAATCAAATAAAATACATCGAGA CTGCATGCAAAAGAGCTTATTTGAGTTATCTTATAGTATAAGTTCTTACACAAGTGTTTTTGTTATCTTCTGAATAGTTT ATAACCAATTTTTAAGTTGTTTTGAGCTTATTTTTATAAGTTAGAGTTTATATCTACCAATACTGAATTTTAAGCTTATT TCAATGGATATCTCAAATTAGTTTATCAACAAGTCATAGACACTAAGCTGTTTTTCAAATGCACTTTCAGTCTTTTCTAC ATGATGCGGGGCTTTACAAAGAAGGATAATTAGTTCTTGGCTTTGCATTAAATTTCCTTTCGAAGTGATATTCTAGGGGT GATTGTATATGCTTTTTATCAATATAAAATACATTAAATACTTAAGAATATATTTGCAATTTATGTTCGTGCAGCCTAAA CAATTAGCAGAGTTGTTAGATGAAGACCCTACAGTGATGGAGAGGAGACAAAAATGTTTTAAAAGGCTTGAACTATATAA AGCAGCAAGGGATGAAATCGATTCTGTTTCTTATGCACGATGA
CDS sequence (LotjaGi3g1v0073000.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAGCTTAATCGGCTTGGTCAACAGAATCCAGCAAGCTTGCACCAAGCTCGGTGACTACGGCGGTGCCGACAACAA CAACTTCGCCGCCTCTCTCTGGGAAGCTCTCCCTTCCGTCGCCGTCGTCGGTGGCCAGAGTTCCGGTAAATCTTCTGTTC TGGAAAGCATCGTTGGACGCGATTTTCTGCCTCGAGGATCAGGGATTGTGACGAGACGTCCATTGGTGTTGCAGCTTCAT AAGCTAGACGATGACACGGAGGAATATGCTGAGTTTCTTCACATGCCAGGGAGAAAGCTAACCAATTATGCCCAAGTCCG CCAGGAAATTCAGGATGAAACTGATAGATTAACGGGAAAGTCAAAACAAATATCTAATGTTCCAATTCATCTTAGCATTT ATTCTCCTCATGTTGTCAACCTAACTTTGATTGATTTACCAGGGTTGACTAAAGTTGCCATAGAGGGACAGCCTGAGACA ATTGCTGAAGACATTGAAAATATGGTTCGATCTTATGTTGAGAAGCCTAATTCGATCATATTGGCAATATCTCCCGCCAA CCAAGACATAGCAACTTCTGATGCAATCAAACTTGCCAGGGAAGTAGATCCCTCAGGTGAGAGAACATTTGGAGTTTTGA CAAAACTGGATTTGATGGACAAAGGAACTAACGCATTGGATGTCCTTGAAGGAAGATCTTATCGCTTGCAACTTCCGTGG GTTGGTATAGTAAATCGATCCCAAGCAGATATCAATAAAAATGTTGATATGATTGTTGCCAGACGCAGGGAGCGTGAGTA TTTTGCAACCAGTCCTGACTATGGGCACTTGGCTCATAAAATGGGCTCAGAATACCTTGCAAAACTTCTCTCACAGCACT TGGAGTCAGTAATTAAGGCGCGGATACCTAGTATAACATCTTTGATAAACAAAAGCATTGAAGAACTTGAATCGGAGATG GATCATCTTGGGAGACCAATTGCTGTTGATGCTGGGGCTCAACTGTACACCATCCTAGACCTTTGCCGCGCATTTGAACG GATATTCAAGGAGCATTTAGATGGAGGGCGGGCAGGAGGAGATAGGATATATAATGTCTTTGACAATCAGCTTCCTGCTG CTCTACGGAAGCTTCCAATTGACAGACATCTTTCTCTTCAGAATGTCAAGAAAGTGGTGTCCGAGGCAGATGGTTACCAG CCTCACTTAATTGCCCCAGAGCAAGGTTACCGGCGCCTTATTGAGGGGGCTCTCAGTTACTTCAGAGGCCCAGCTGAAGC TTCAGTTGACGCAGTTCACTTTGTCTTGAAAGAACTTGTGAGGAAATCATTAGCTGAAACTCAGGAACTGAAACGTTTCC CAACTCTTCAAGCGGAAATAGCCTCAGCTACAAGTGAGGCTTTGGAGAGGTTCCGTGACGAGAGCAAGAAGACAACAGTT CGGCTCGTGGATATGGAAGCTTCGTACCTCACTGTGGATTTCTTCCGAAGACTTCCTGAAGAAATGGAGAGAGCTGGAAA TCCCTCAAATCCGAATGTGGATCGATATGGAGAAGGACATTTTAGGAGGATTGGATCAAATGTGTCATCCTATATAGGAA TGGTGTCAGACACACTAAGAAACACGATTCCAAAGGCTGTGGTTTATTGTCAGGTCAGACAAGCAAAACTGTCATTGCTA AACCATTTCCTTACACAAATAGGACAGAAAGAGCCTAAACAATTAGCAGAGTTGTTAGATGAAGACCCTACAGTGATGGA GAGGAGACAAAAATGTTTTAAAAGGCTTGAACTATATAAAGCAGCAAGGGATGAAATCGATTCTGTTTCTTATGCACGAT GA
Protein sequence (LotjaGi3g1v0073000.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESLIGLVNRIQQACTKLGDYGGADNNNFAASLWEALPSVAVVGGQSSGKSSVLESIVGRDFLPRGSGIVTRRPLVLQLH KLDDDTEEYAEFLHMPGRKLTNYAQVRQEIQDETDRLTGKSKQISNVPIHLSIYSPHVVNLTLIDLPGLTKVAIEGQPET IAEDIENMVRSYVEKPNSIILAISPANQDIATSDAIKLAREVDPSGERTFGVLTKLDLMDKGTNALDVLEGRSYRLQLPW VGIVNRSQADINKNVDMIVARRREREYFATSPDYGHLAHKMGSEYLAKLLSQHLESVIKARIPSITSLINKSIEELESEM DHLGRPIAVDAGAQLYTILDLCRAFERIFKEHLDGGRAGGDRIYNVFDNQLPAALRKLPIDRHLSLQNVKKVVSEADGYQ PHLIAPEQGYRRLIEGALSYFRGPAEASVDAVHFVLKELVRKSLAETQELKRFPTLQAEIASATSEALERFRDESKKTTV RLVDMEASYLTVDFFRRLPEEMERAGNPSNPNVDRYGEGHFRRIGSNVSSYIGMVSDTLRNTIPKAVVYCQVRQAKLSLL NHFLTQIGQKEPKQLAELLDEDPTVMERRQKCFKRLELYKAARDEIDSVSYAR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 612 | 612 | 0.0 | – | |
| PANTHER | 1 | 612 | 612 | 0.0 | ||
| SMART | 1 | 254 | 254 | 8.3E-112 | ||
| Gene3D | 2 | 322 | 321 | 2.0E-115 | – | |
| SUPERFAMILY | 28 | 311 | 284 | 5.8E-72 | ||
| ProSiteProfiles | 34 | 303 | 270 | 60.535 | ||
| PRINTS | 37 | 55 | 19 | 2.5E-60 | ||
| CDD | 37 | 303 | 267 | 1.72025E-132 | ||
| Pfam | 40 | 215 | 176 | 4.0E-54 | ||
| PRINTS | 62 | 79 | 18 | 2.5E-60 | ||
| ProSitePatterns | 63 | 72 | 10 | - | ||
| PRINTS | 135 | 152 | 18 | 2.5E-60 | ||
| PRINTS | 185 | 203 | 19 | 2.5E-60 | ||
| PRINTS | 204 | 220 | 17 | 2.5E-60 | ||
| Pfam | 225 | 492 | 268 | 2.2E-60 | ||
| PRINTS | 227 | 246 | 20 | 2.5E-60 | ||
| Gene3D | 329 | 580 | 252 | 3.4E-54 | – | |
| SMART | 516 | 609 | 94 | 8.1E-33 | ||
| Pfam | 518 | 609 | 92 | 1.6E-24 | ||
| ProSiteProfiles | 521 | 613 | 93 | 21.281 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activity | Catalysis of the reaction: GTP + H2O = GDP + phosphate. | ||
| Molecular function | GTP binding | Interacting selectively and non-covalently with GTP, guanosine triphosphate. |
Expression pattern of LotjaGi3g1v0073000.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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