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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0077000 |
| Transcript ID | LotjaGi3g1v0077000.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ABC transporter G family member; TAIR: AT4G27420.1 ABC-2 type transporter family protein; Swiss-Prot: sp|Q9SZR9|AB9G_ARATH ABC transporter G family member 9; TrEMBL-Plants: tr|A0A072VBH9|A0A072VBH9_MEDTR White-brown-complex ABC transporter family protein; Found in the gene: LotjaGi3g1v0077000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:8440816..8446001) extracted from Lotus japonicus Gifu genome v1.2.
AAAAACAGAACTCAAATTATTCTCAAAAAAATAAAATAGGCAAAACAGAATGGAAGTGTGTTTGTGTTCAATTGATCTAT CTATACATAACCAAAACTTCTCTTCCTCTTCACGGTTCACCTTTCTTGTATATGAACATATATACACACTTTCTTTTTTG TCCGCATTGATCAAATCGGATATTGAAACAACACTTGTTTACTAATATTAGTAACACATGTAAGCAATGATGCACCGCTT CATGCCTTTTTGATTTTATGGGAAAGATAGACTAGTTTTTAATTGAGGATTTCGTAGTTGAAACGACACATTACAAGGAC GGGGATAAATACTTCATTGGTGTCTCATGTCTCCCTTGTAATGTGTCTGTTTTGACATGATCAGCTTTATATTGTAGACA TATCAGGAACACAGAATTTCAGGCCGTATTCAAAGATCAAGTTCGAGGGGTTCGAAGCTGCGTTTCTGAAAGTTGATGTT TGTTATGGATCAAGACATCAAAGATGTTGAGTGTCAAACTATATACAAAGAGAGCGTGCATGAGGAAGAAGAACCTGACA TATTGCACAAGGGAAAACGTCCTGTAATTCTCAAGGTATGTATGTGTGTGTGAATTTGTAAAATGACCCTTTTGCTTGTG ATTGATGTTTGCATTTTAACTTGACGAAAATGATTCAGTCTGTTTAATATACAAGTAGATTGGTGTTCATGGAAATAATT GTATTTTCTTTATTTTCAAAAATCATGATGTACACACCGCGCTAGTAACCATAATAACCCGGCCTAAAGGAGCTGATGTA AAGTCTAACAAGAACTCTAAGCAAAAACGCTTAGGACTTAACCATGATAGCGCGGCCTAAAGGAAGAGTTAATGTGGCAT AACTAGTCTCGCGGGCTTAATGTAAGCACAATGATCCTAACCCCTAAATTAACTAGGCAATCATGATACTCTTTAATCAC CTAATAATCACATAATTAATGTGTTACTAGAGACAACTCCCACGTCAATTAAAGACTCAAAAAAGGACAAGAATCTATCA TCTTCAGTCTAACACTATTCTGGGACTCTGAGTTAACCGTCTGGCATAGTTTCCTAGGAGTTTGGAGAGAGGAAATGAAT TTGCACTTATTCTAGGACGTTTCCACATTTTGTATTTTATATTCATGCAGCCTTTATTGTCAGCCTTCTATAATTTGGAT CAATGCTGATATTTTTTCTTTTCTTTTTATGAACCACCATCTTGCTTGTGATTAATGACTCTGTTATGTTGATGAAAATG ACTCATCCTGTTTAAGAGTTTGTGTTTGGATTAGTATTCAGGGAAATATATGTTTTTTCGTCATTTCCACAATAATTATT TTGGACTTGTTTTTTATTCATGTAGCATTTTATGTCAGCTTTCTCATGTGGAATTTTCTTTTTATTTTTCTTTTTATGAT TCACAATGCAGTTTGATGATGTTGTCTACAAAATTAAGACCAAGAAAGGAGGACTCTTTGAGAAGAACACAAAATCAGAA GAGAAAGTGATCCTCAAAGGAGTGACAGGCACTGTTCAACCTGGTGAAATGCTAGCCATGCTAGGACCCTCAGGAAGTGG CAAAACAACTCTGCTCACAGCATTAGGAGGAAGACTAGGAGGAAAACTTCATGGATCCATAACTTACAATGGTGAACCCT TCACAAACACAATGAAGAGAAACACAGGCTTTGTTACCCAAGATGATGTTCTTTACCCCCATTTAACAGTAACTGAAACA TTAGTCTTCACTGCTCTTCTTAGATTACCTAACACTGTCACAAAAGAACAGAAAGTGAAACATGCAAAAGATGTCTTAGA ACAACTTGGTTTAACCAAGTGCAAGGATAGCATTGTTGGAAGCACAACTTTGAGGGGTGTTTCCGGGGGAGAGAGAAAAA GGGTTAGCATTGGGCAAGAATTGCTTATAAATCCAAGCTTGTTGTTTTTAGATGAACCTACCTCTGGGTTAGACTCAACC ACAGCACAGAGGATTGTGTCAACTTTGTGGGAGCTTGCAAGAGGAGGGAGGACTGTTGTGATGACAATACACCAGCCTTC AAGTAGGTTATACTACTTGTTTCATAAAGTGTTGTTGCTGGCAGAAGGGAACACTTTGTATTTTGGGAAGGGATCTGAAG CTATTGAGTACTTTTCTAGTATTGGATATGCGCCAGCAATGGCCATGAACCCTTCAGACTTCCTTTTGGATCTTGCAAAT GGTATGCTTTTAATTTTTATGCATATTAGCAAATATGATATGTCCTGTGATATTTTACTAAACACTTTGGTCTACATTTT AGTTTTACTTTGAATGTAGACCATGTTAAATCCTGAGCACCCATGAACCATGTTGTTACAATTAACATTCAGTATATATC ATTTGCAATATAATTCATATGTGCTAAAACTAATTTGTAGAAAAACTCTTTTAACTTGTGAATCATGTTTTTCATGGTCA ACATTATACAGAGCATATATTGAATTTAACATTGTTCTTGGATCTCTATATATTTGGAATCTGTTAAATTGTTAAGTGCT ATTTGCTCCTAGAACTGGCAACTGGACTAGCACATTTTGTCTGAACGAAAATATTTGGTATCGTTTTTTAAATTAAACTT TTCTTAGAGAATTTGAAGCTTCATCCAATGAGATGTTGGTTTAGTGTTACATGTTGATTCCCTTTAAATAAGATATCGAG TTTGAGTGTTGTGTATTCTTAAAACCATGCTGAGAGAGCTAATTCCCTTAAACTATGAATCATCCTGACTCGAACAGGTT TGGCTCTTTTTTTTTCTTTGTCCATGAATTTACAGCTTTTAACTTTCAACATCTAAACAATAATAATATTATAGTAGAGT GATAAGTTCTCTGTTGATGTGTAAAAGTCCAAATGAAAAAATGATTATGTTTGATGTTTATTTAAAAGAAAACATTTGAT ATTGGATTATACCTTGTTACTTTGCTAAGTGAGGAAAATTTGCAGGTATCTACACTGATGGGTTAAACCAGGACCATGTC ATAGATAAACAACATTTGATTTCCACATTTAAGAGCAAGTTTGATGCACAATTGAAGTCAATAAATCAAGAAATCAGTGA CCCTGAAATTAGTCAGCGTAGATTTCAAGGCACAGGCTCTGGAAAGTGGCCAACGAGCTGGTCGCAGCAATTCTTTGTGC TGTTAAGAAGAGATGTCAAAGAGAGAAAGTATGAAGCTTTCTCTGCCCTGCGGATTAGTCAGGTCCTTGTGGTTGCTCTT ATGTCAGGACTTCTGTGGTATAAGTCTGATATTTCACACTTACAGGATCAGGTAAGAATTTCAACTAAACTTATTTTCAT GGGAAATTCAGTGATTGACAAAATAATGTTCTTCCAACATGTTAGCATTTTCTCATCTTTAGTGACTTGCACTTACCCCC CTTGTGCTTTGATCTTAGCCCATAAGAGCAGTTGGAGAACCATGCCACTATAAACTTTTTGATTCAAGAGTACAAGGCAT TTTAAACTCCACACTAGAATCCCATACAATTGAATTGATGTGGAACTCTAATCTCATATCTTGCAAGTACATCCTAATAT TCCACCACTCTCCACAACCTCCGTCCTCCTGCGCATATAGACCGAAATCTTTTGTTTTTATTTAGTGTCACATTCTCTGT CTCACTGGTTTATTTAATTGTGTTATGTCATTTAAAAATCTCTTATGTAAGGTTATAATTGTTCAATTTGTGTCCACGTG ACACAATTTGATTGTTGAGCTAGAGAAAGGGACATCAAATGAGGACAAGGGTTCTTCATTTAGTGCCCACACAGACTAGA CTTGCAGTTGCACTTTGCCTAGACCGGGGATAATGTAGATTAATACAATGAACAATAGAAGAATGATCATATTACTAAAG CTAGTTATTGCAGCTGAAGAGCACAAAGCAAATCTCGTACTTTTGATGTTGGACTCAAAACTTGCAAGTGGAGCCAACAT CTCACCACGCTCCACAGTCCCCATGGGATGACAATGCACTAGCACTTTGATTAGTCCCAAGTTAATCCCATATTTTTGCA ACTGCGACGCCCACACGGGCTCGCGATGCACTCGCCTATAACTAGGCCGGAAAATCTCATGCCTCATACTTTAAAAGAAG ATCATAACATATACTTAATCTAGAAGCATGTAATTATAATACATTATCATTTTCTTAATTCAAAAGTATAATCAGTTCTC AGTATTAATGTGGATTATCAGAGAACTAAATTACAAAAAGAATGACTAACCTATGATTTTGATTGTCTATAAGCTACTAA TCACAATTCATTTATGTGTTACTTGTAGATTGGGCTCCTCTTCTTCGTATCAGGCTTCTGGGGTTTCTTCCCACTCTTCC AAGCAATTTTCACCTTCCCACAAGAGCTAGTAATGATAGAGAAAGAACGCTCCTCAGGAATGTACAGGCTCTCCTCCTAC TTCATGTCAAGAATGGTAGCTGACCTCCCCATGGAACTAATCCTTCCAACCATATTCCTCCTCATAACATATTTCATGGC AGGCCTAAAGCACAACTTCGCCAGCTTCCTCTGCACCCTCCTAAGCCTCTTACTCAATGTCTTAGTTGCTCAAGGCCTAG GCCTCGCCATCGGGGCCGTCGTCCTCAATCAAAAATCCGCGGCCACGCTCGCCTCCGTGATCATGCTTTGCTTCTTGCTG GCCGGCGGGTTCTACGTTCAGAATGTTCCCGGGTTTATAGCCTGGGTGAAGTACATTTCTATAAGCTACTACACGTACCA GTTGTTTATTGTGTCTCAGTATCATGCTGGGGAAACATACCCTTGTTCTAGTGGTCAGTGTCAAGTGTCAGAGTTTCCTT CTATAAAGGAAATGGGGTTTAATTTTCACGGGCAAGCGCTAACTGCGGTGGCTCTTGTGGTGATGATGATTGGTTATAGA GTTATTGCTTATGTTGCTCTTATGAGGATTGGAGTGACTAAGAAATTGGCCTAGTGTAATAATTCTTTGATTTTTGTTCA CTTGTGGTGAGTTTTTCTTCTGTTCTTGTTCTTATCTTTATGCGGAAGGGAAGTAGTTAATTTGTTCTTGTTTTGGTGAG CAGTGTTGGATATGTGTATGTTTTTTGTTCTGAGCTGTTCCATATATAAAATTATGTTGGTTGGAA
CDS sequence (LotjaGi3g1v0077000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTGTTATGGATCAAGACATCAAAGATGTTGAGTGTCAAACTATATACAAAGAGAGCGTGCATGAGGAAGAAGAACC TGACATATTGCACAAGGGAAAACGTCCTGTAATTCTCAAGTTTGATGATGTTGTCTACAAAATTAAGACCAAGAAAGGAG GACTCTTTGAGAAGAACACAAAATCAGAAGAGAAAGTGATCCTCAAAGGAGTGACAGGCACTGTTCAACCTGGTGAAATG CTAGCCATGCTAGGACCCTCAGGAAGTGGCAAAACAACTCTGCTCACAGCATTAGGAGGAAGACTAGGAGGAAAACTTCA TGGATCCATAACTTACAATGGTGAACCCTTCACAAACACAATGAAGAGAAACACAGGCTTTGTTACCCAAGATGATGTTC TTTACCCCCATTTAACAGTAACTGAAACATTAGTCTTCACTGCTCTTCTTAGATTACCTAACACTGTCACAAAAGAACAG AAAGTGAAACATGCAAAAGATGTCTTAGAACAACTTGGTTTAACCAAGTGCAAGGATAGCATTGTTGGAAGCACAACTTT GAGGGGTGTTTCCGGGGGAGAGAGAAAAAGGGTTAGCATTGGGCAAGAATTGCTTATAAATCCAAGCTTGTTGTTTTTAG ATGAACCTACCTCTGGGTTAGACTCAACCACAGCACAGAGGATTGTGTCAACTTTGTGGGAGCTTGCAAGAGGAGGGAGG ACTGTTGTGATGACAATACACCAGCCTTCAAGTAGGTTATACTACTTGTTTCATAAAGTGTTGTTGCTGGCAGAAGGGAA CACTTTGTATTTTGGGAAGGGATCTGAAGCTATTGAGTACTTTTCTAGTATTGGATATGCGCCAGCAATGGCCATGAACC CTTCAGACTTCCTTTTGGATCTTGCAAATGGTATCTACACTGATGGGTTAAACCAGGACCATGTCATAGATAAACAACAT TTGATTTCCACATTTAAGAGCAAGTTTGATGCACAATTGAAGTCAATAAATCAAGAAATCAGTGACCCTGAAATTAGTCA GCGTAGATTTCAAGGCACAGGCTCTGGAAAGTGGCCAACGAGCTGGTCGCAGCAATTCTTTGTGCTGTTAAGAAGAGATG TCAAAGAGAGAAAGTATGAAGCTTTCTCTGCCCTGCGGATTAGTCAGGTCCTTGTGGTTGCTCTTATGTCAGGACTTCTG TGGTATAAGTCTGATATTTCACACTTACAGGATCAGATTGGGCTCCTCTTCTTCGTATCAGGCTTCTGGGGTTTCTTCCC ACTCTTCCAAGCAATTTTCACCTTCCCACAAGAGCTAGTAATGATAGAGAAAGAACGCTCCTCAGGAATGTACAGGCTCT CCTCCTACTTCATGTCAAGAATGGTAGCTGACCTCCCCATGGAACTAATCCTTCCAACCATATTCCTCCTCATAACATAT TTCATGGCAGGCCTAAAGCACAACTTCGCCAGCTTCCTCTGCACCCTCCTAAGCCTCTTACTCAATGTCTTAGTTGCTCA AGGCCTAGGCCTCGCCATCGGGGCCGTCGTCCTCAATCAAAAATCCGCGGCCACGCTCGCCTCCGTGATCATGCTTTGCT TCTTGCTGGCCGGCGGGTTCTACGTTCAGAATGTTCCCGGGTTTATAGCCTGGGTGAAGTACATTTCTATAAGCTACTAC ACGTACCAGTTGTTTATTGTGTCTCAGTATCATGCTGGGGAAACATACCCTTGTTCTAGTGGTCAGTGTCAAGTGTCAGA GTTTCCTTCTATAAAGGAAATGGGGTTTAATTTTCACGGGCAAGCGCTAACTGCGGTGGCTCTTGTGGTGATGATGATTG GTTATAGAGTTATTGCTTATGTTGCTCTTATGAGGATTGGAGTGACTAAGAAATTGGCCTAG
Protein sequence (LotjaGi3g1v0077000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFVMDQDIKDVECQTIYKESVHEEEEPDILHKGKRPVILKFDDVVYKIKTKKGGLFEKNTKSEEKVILKGVTGTVQPGEM LAMLGPSGSGKTTLLTALGGRLGGKLHGSITYNGEPFTNTMKRNTGFVTQDDVLYPHLTVTETLVFTALLRLPNTVTKEQ KVKHAKDVLEQLGLTKCKDSIVGSTTLRGVSGGERKRVSIGQELLINPSLLFLDEPTSGLDSTTAQRIVSTLWELARGGR TVVMTIHQPSSRLYYLFHKVLLLAEGNTLYFGKGSEAIEYFSSIGYAPAMAMNPSDFLLDLANGIYTDGLNQDHVIDKQH LISTFKSKFDAQLKSINQEISDPEISQRRFQGTGSGKWPTSWSQQFFVLLRRDVKERKYEAFSALRISQVLVVALMSGLL WYKSDISHLQDQIGLLFFVSGFWGFFPLFQAIFTFPQELVMIEKERSSGMYRLSSYFMSRMVADLPMELILPTIFLLITY FMAGLKHNFASFLCTLLSLLLNVLVAQGLGLAIGAVVLNQKSAATLASVIMLCFLLAGGFYVQNVPGFIAWVKYISISYY TYQLFIVSQYHAGETYPCSSGQCQVSEFPSIKEMGFNFHGQALTAVALVVMMIGYRVIAYVALMRIGVTKKLA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 380 | 380 | - | – | |
| PANTHER | 16 | 628 | 613 | 6.7E-268 | – | |
| PANTHER | 16 | 628 | 613 | 6.7E-268 | – | |
| ProSiteProfiles | 39 | 290 | 252 | 21.055 | ||
| Gene3D | 56 | 284 | 229 | 2.9E-55 | – | |
| SUPERFAMILY | 63 | 283 | 221 | 3.76E-47 | ||
| Pfam | 68 | 218 | 151 | 3.0E-27 | ||
| SMART | 77 | 275 | 199 | 5.3E-12 | ||
| ProSitePatterns | 190 | 204 | 15 | - | ||
| Pfam | 364 | 570 | 207 | 2.3E-36 | ||
| Phobius | 381 | 402 | 22 | - | – | |
| TMHMM | 382 | 401 | 20 | - | – | |
| Phobius | 403 | 413 | 11 | - | – | |
| TMHMM | 413 | 435 | 23 | - | – | |
| Phobius | 414 | 436 | 23 | - | – | |
| Phobius | 437 | 456 | 20 | - | – | |
| Phobius | 457 | 483 | 27 | - | – | |
| TMHMM | 461 | 483 | 23 | - | – | |
| Phobius | 484 | 488 | 5 | - | – | |
| Phobius | 489 | 516 | 28 | - | – | |
| TMHMM | 496 | 518 | 23 | - | – | |
| Phobius | 517 | 522 | 6 | - | – | |
| Phobius | 523 | 542 | 20 | - | – | |
| TMHMM | 523 | 542 | 20 | - | – | |
| Phobius | 543 | 601 | 59 | - | – | |
| TMHMM | 547 | 566 | 20 | - | – | |
| TMHMM | 602 | 624 | 23 | - | – | |
| Phobius | 602 | 623 | 22 | - | – | |
| Phobius | 624 | 633 | 10 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. |
Expression pattern of LotjaGi3g1v0077000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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