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LotjaGi3g1v0079700.1

Overview

Field Value
Gene ID LotjaGi3g1v0079700
Transcript ID LotjaGi3g1v0079700.1
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description tRNA (guanine(37)-N1)-methyltransferase; TAIR: AT4G27340.1 Met-10+ like family protein; Swiss-Prot: sp|F6H2F8|TRM51_VITVI tRNA (guanine(37)-N1)-methyltransferase 1; TrEMBL-Plants: tr|A0A151SVP0|A0A151SVP0_CAJCA tRNA (guanine(37)-N1)-methyltransferase; Found in the gene: LotjaGi3g1v0079700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:8814698..8822434) extracted from Lotus japonicus Gifu genome v1.2.

TAAAACCCCATCACCCAAATGAGTACAATGAATCCATGATGATGATGGCAAGCCTATTCCTAAAGCCCCATCTTCATCTT GTTCATCTTCCTTCCAAACTCATTTTCCCCATCACTCACAAACCTTCCCTTTCCCTTCCCACCACATTCTCTATCAAACA CTTCACCACCACCACACTCTCCTATGGACCTTCCCTCTACAAAGGAACCACCCCATCCCAATCCCAATCTCAACACCAAC TCCCTCTACCCCAAAACGACGTCGTTCTCCGCGAAGAAACCTTCACCAGAATCTACGACCTCGCCGCGCTCCGCGTCCCT TCCGCCGAGTGCTCCGCCTTAGAGAACCGCCTCCGCGGCCACCTCCTCAACTGGCCTCGCATTCGCAACATCGCTCGCGT CCCCGGCGACGACATCGACCCCAACCTCGCACCCCTCTTACCCAACGGTGACGACGGCGGAGAAGAAGAACAAGAAGGAA GCGCTCTCGTCTCGTTGCAGCGGCGCGTTCACGGCAAAGCGGACGGCGACGGCGAGGTTTTGAGCCCTGTGCTGTACCGG GAGAAGCTTGCGAACACGTTCAACAGTCGCGGGTTTGTCAATTTCCGGAACCTGGCGAAGATTTCGAGGCCGAATAGGAA TAAGAAGAAGAAGAAGGAGGAGGAGGAGGAAGAGGGGAATGATAAAGTGGTTGAAGTTGAAGGGAGAAAGGGCTCTGGGA AGAACGATTTTGCGGCGGTTGAGGTTGTTGATGATGATGAGGAGGAGGAAGAAGATGGTGGTTTGAGGAAGTTGTTAGGT GAAGGATTTGGGAGGAGGAAATGGAGGGGTTCCACGAGGTTGTTGCTTTTGGATGAACGGTTCGCCGGTCATGGCGTGGA GGAGCTACCTGAGGCGATAAAGGTAACCCTTTGTTCTTCCAAGCTTTTCAGTGGCAAGCTTTTTGCATACCCTTGCTATG TCAATTCTTTTGGCTGCAATTTTTTTTTGCTTCTCTGGTTGTGTTGTATTGTTAAGGTTTCGTTGCTTGGCGCTTTAGTT TTAACTTTAAATGTGAAGAAAAAGATGGTGATTATGATGATTAAGGATTAAGAGCGTGTATGGTTCTGTGGTTGGGAGCT CCAAAATCCCTTTTAGGGAAAAGCCACAATGTGTAGCTTCTAGGGTCGTGTCCTTTGGATTGTGTGTTCACTGGTTGTCC ACATACTATCAGCATGTTTTAACTAGTGGACTGGTACTTGGTAGTGGTAGACTTGTTTCTCGAGCAATTTTCATTGTAAA TAATCTGGCATTGACTCTGAGAAGGTAGGTATTTTGGCGATGATGGTAATTTCTGGTTCAAAAGTTGACTAGATTTACCT CAAGATGTTCAGCCACACTGGCTTCCTTTAGCACCACACTGGCTTCCTTTAGCAGGCTGATTTTGGCCTTTTCATTGAAG AATTGCTAAGTATCAGATCCTTCATGTTTTTTCATTCACTGAATAATCCTACAGTCATAGTTGTGAGACCAATCCTTGGA AGTCAAGTCAGTAATGGGGTTAGGTAAAGTCCTTTTTAAAATGTTGACTCTGGGATTTGAACAGATAACATTGCGATTTC ACATTAGGTTAGTCGACTTTAAATATGACCAACCTCTATCAGTGCCAATCAGTCATTGCATGTGAGCAAAGTTGCATATA ATCAAAGGCTAGTCTTTTTGTTTGACCGCAGGACCTTATCTAAATTATTAGGGGAAACTTCTTTTTTGAAAATCGTTAAA TCTGTCTTTATCAATGCGGAGAGTGCTTCGTTAATCATTTTGTTGGACAGAGCAGGACCTTTATCTGAATTCTTTAGATG TAATGGTTTTTCTGAAAATGATAATAGTTATTTTCTTCAGCTACAGTGTATAGGGGATTATTTTTCAGGGCTCGCTCAAT TTAGGATGTCCTTTAGCAGTAATGAGGATCTGGATTTGGATCCTCTTATATGGCATGTTATTGTCATGTTAAAGTTTGTG TCTATCCCTTTCTTCTTAAATATTCATAGGCCCCCACTTACTAATATACATGAAGAGAGAGATAGACACAAAATTCCAAT ATGACAAGGTCATGTGTAACCTCGACATAAAGGAACTAAATTCGACATGGTAACATTTAATCTACACTTCACAAAGTATT TTGATGTTATATCGTACCTTAAAGCATCATAAATGATATTACTTAAGGACCTCAGCGTCAATATTATTTTTAGGGCTCTT GTCTAAGTTTAAAAAAACAGTTGAAGTAGTAGTTCAAGGTGAAGTACTGAACAGTTAACGATATATCTTTAATTTCTAAT TATCATCACAAACTATTTATCTGTTGTTGTATATCTCCTTGTTATTTGATGTCCCATCTCTTAGTTTACAAATGGGACTG ATCACAGTTATACTCATGTTTTCCTTTCTACTTATCATGAAAATTTGTTCAATCTGTGTTTTGGGTATGTGACATCTCTT CTGTTCACATATGACATGGCTCAAATTTTATCCTGTCTTCAGGCTGTCTTGAAGGAGTACACGGAAAAGAGTACAACTTT GACTTTTGAGCTAGTTAGATGCAGGCTAAAATTGTTTTATGATTACTGGCAGATGAATGAGGTATATTTTACCAAGACAA TCTCCTATAAACTTAATCTGTTTTTGGCTGTACGTGCATGATAAATTGCACTCTTCACTGTCATAATTAACTTAGTGGGA TGGGCGTTTCAAAACAAAGTAATATGGTAGTTTTGTTTCATTTATTGGAGAGTTGAACTACAGAGAGGATAGTCCTATAG CTGTTAAAATGTAAAATGTACTCTTTGCTGTCATGTTTAATTTAAGTGGAACAGGTGCTTCAAAACAAAGTAATATGGTT TTTGTGTTTTAGTTATTGGAGAGTTGAATTAGATAGAGGATAGTCTGATAGCTGTATCAATTTTAACACAACTAAAGATT TTCGTTAGTTTGTGAAAATTGGATTTTACATTATAACCAACTGCTGATTATCGTCTACAATTATTTTTCAACTCCAAATC TTTATTTAAGTATGAGGCCAAGAAACTTGTGTGCATGTGTTCGTATTTCCATTGATTTTGTTTATTCAATTTCAAAGTGT GAGTATAACATAAATTGTGGGTCTTATATGATTGCTGCAGACCTTGGAGGTGTTACTGCCTGAGGGTATGGTTGTTCCAT CAGCTTTTGAGACTGTTGGTCATATTGCACACCTGAATTTGAGAGAGGAACATTTACCATACAAGAAGCTTATAGCAAAG GTTCTTGTTTGGAAATAATTTTGGTTACCATGTTTAAATGTGTAAAGTAAGGTTGTATTGCAAATTCTTATCTGTGTTAA TGTATGAAATTGCGTTCAGGTTGTACTGGATAAAAATAAGCCAAAGATAAAAACAGTTGTGAACAAGATTGATTCCATTC AAAATGAGTACAGGACCATGCAGCTTGAGGTTTTAGCAGGAAACCACTCTCTTGTGACTACAGTAGTTGAGAATGGAATT CGCTTTCAGGTTGACTTAGCAACAGTGTATGCTCTATTTCCATCATTGACCAATGTATAGCAATTGACAGGCTTGCTTTA CTTGTTGCTCAATTAATATCATTTCATGAACATGAAGTTTGTTTAACAGTCATAGTTATGTCTTAATTTGATCTTCTCAT TTGTATTTCTGTACAAGTAGCACCATTATACCATGAAAAGGCTATTATACCCTTACCAGTTCTGAAAGTTGCATGAAGGT TTGAAGCGATTAAGGAATCTTGATTTTGACTTATATGTTGAAATTTTTTGTATCATATTTTCTCAGGCAGGTGTGGGTCT CTGCCATTTCTGTAAATATTGATGCAGATATAGTTATGTGTATTGATACCTTCATGTATATGTTATATGTGGAAAAAAAT CGTGTGAACCTGCAATGTTACTTCCTACATTTTAGGCTGTCATGTTTTGAATGTTATACGTTTAAAATTTGACCTTGGGG ACCATTTATCGTTGCTTCTGAATCAATTACTTGTAGCACCTATTCATTGAATCTAGAAATATAACATGACTATTTTTTTT TCAAATTTCAAAATATACTCTAGAGAGAGAAATTAGGTGAAAGAATTAATGTAAAAGTATCAGTTATCAATATTTTTTCA TTTTCTTTCTATGCAGATATTGGAATTCTAGGCTTGCAACTGAAAGGCAAAGGCTTCTGAGTGGCTTTACACGAAATGAT GTTATCTGTATGTAGTACCTTATTGTTAAGATTATTATATTAGCCTACCTATGCTAGTTATACTTCACTTTTCATGTCTT CTGATCATTGTCTTTCCCATCCCAATTGTTGAAGTTGGCTGGTCACAGCAACCTGATGTCATACACTGATGATGAAATTT GGTTCTGTTAGAACTGGTAGATCTAGGTTAACAGTAATTGGGGAAAAAATCAAGAACAGAGAAGGAAAATGCAATTGAGA TCAGAGAAGATTTGGATTTCTTGAAGAACAAGCTTGGATACAGTTTGGAAGAGAAACCGCTTTCTCTCTCTAGCTAACTG AATTCCTCAATTCAGTTCAAGACTCAACTGTTTCCAAAACTAACTTCTCACTGACAGTAAAGCTATTTATATCCTAGTTT GCTATATTACAAACTAGTCCTTTAAGAAAGTATTTATTCTAAGTCAGTCCTAAACATGGACTAACTAATCCTTATTTTGT CTCCTAACATAGACTTGCGAGACAATAGGTCTACCCTTGATCCTAACAGGTTCTTTTTTCTTTGCTATGGGATTTTGAAT AAATGAACATATTGTGACCATACAATAATACATGGGTGATTGAGATTTAAAGTGGTTTAGTGGTCACATCTCTAATGATA AACACTCCTCTCACCTGTTACATTCCATATGTGTGTGTGTGTGTAAAGAGCGAGACAGAGGGAATATCTTAGTGGTGGCA TAAAGAGGCAATGCTTGAGGGCTCATTGTGGATTTGATATGCAGTATAACTGTATGAGTGAGAATGGTGAAAAATGCTTG GAGTTTAAATATTGTCTGATGGTAATTTTAACTTCATAACTTATGGCCTTGATTTAAGAAAAAGGAAAATGGGAACTGTT AAAATTGAAGTTCTTATGATGCAAATTGCAAAGTCTGAATGAAAATGAAATTGAAAGCAAGAATTAATGGACCACTGTTG AATATGGTGCAAACATGTCCTGGTTGGTTCTTCAAAATCTTTCTTTACTTGCAATAACATATGTTTGTATCTTTAGTTGC TGAAATGTTAAATATGTGCTTCTGTATGTTATTTATTAAGAAAAATATCCGTGACTTGCTTACGCATGAAACATGAACTT CATTATATATTCAATTGACAGGTGATGTTTTCTCTGGAGTTGGTCCCTTAGCCATATCTGCAGCAAGAATAGTTAAGCGT GTTTATGCTAATGACTTGAATCCATATGCCATTGAGTATCTGGAAAGAAATAGTGTTCTAAATAAACTTGAGAGGAAGAT TAAGGTAAGGTTGCTTGTTGAGTGACTATCTTCTATTCCTCTTGAAGATGTTTTATCAGCTTTTATATATGCAAAAATAA AAATCTAACGCTATGTTAGAAATGTATTCCAATTTAGGATTTGTAGATGCTATTTCTTGGTTTATATTAAAGTATTGTAA ATTAATTTTTTCCGCAACATTTTTTTTTGGAAATTTTTACTTTTTTTAAAGTGTTATGGATTATCTTGAATGTTTTATCA TCATTGAAATGAAACAGATCATTTGTTTTCATTTCAAAGAAACACTGAAATGCAAAACATTGAAATATTGTGTTGTCTGA TACAAGTGTCCAATACTTGGCTGCACACAACTCCTTTCTTGAAATGTCCATGCTTCATTGGATGCTGGTGGCTAATGATT AAAAAGAATGAGTTACATGATACGTCTTTTTCACATGTAGAACTGAGACATAAGTTGCATTTGACCCTTTCTTTATGGAA TTTTCTACCAAATTAAGGATTTCGATTGTTTCTCTAGGTCTTTAACATGGATGGAAGAAGGTTCATTAAGGCTATATATG CCAGTGATAAAGCTCAGTCCATCACACAAGTGGTTATGAACTTGCCAAATGATGCTGCAGAATTTCTAGGTTGCTTTTTC TTTCTGGGTCATTCTTTCTTTATCTGTACTATATTTTTTTATATCCATATGTTTGATTTGATCTATTGCACACATCTTTT CTGCATGATATAGTTAGATATGTTAGGTTTTTCAGTTTTTCCATAATCTTTTCCTAAGTCATGGATGATGACGTGTCTAA CTTGGACTGTTGTTTCAAGTATTTCTGATTAGAGTGAGGGTTGGGTAGGTCCTACTTTTGATCCCTCCCTCATGCATTAT AGTTTATATATAAAGACCTGCCATCATGCCTAGATGTTGAAAGGAATGGCATGAGACCAAAAAATGCTGTATGTCTCAAT AGGTTGAAGAACTTAGTTAGAGAATCTGCACTGCAGTATCTGATGTTTTCTATTGAATTGAACTACACAAACAGAGTTGT AGTTCAACAATCAGCTAGTGAGTAAAAGCATTTATACTTGCACCAACAATCCTACTCCTTTGTTTTTGCATGTGATAACC TTACTTCATAATTGCTGGGTATAGGGTCGTTGGTTTTATGATTGTTCTTGTGTTAGTGGAGAACTAATTTGTCTTTCAAT ATGAGATTATTGATTCGAGTATTATTGCTTGGATGAGTTGAACTCATGCAATGATCAGTAGAGTTCTGAGTGGCTTTAGT CATGCTGTTATGGTTTTACAGTTCCTTTCCGTATGGTTAAACTTCTTATGATAGCCGGATTTAATTTCTGGATTGTCTAC TTCCCCTGCAGATGCATTTCGGGGAATATACAAAGATAGACCTAAGGATGGGGAATTTACTTTGCCAATGATCCATGTTT ATGGATTCTCCAAAGCACGAGATCCAGAATTTGATTTTCATGAGGTTGGTTACCGAAACTCTAAACTTCTATGGGGTCTT ATAGACTCTTTACAAATCATTCAAATTTGACCTTTGCTGCTATGCTTGTGTTATGTATACCTTTTGCATTGGAGACAATA TTTTAACAAGGCACTTATGATGCAGAGAATAAGAATTGCGCTGCTAGAAGTGGCAGTCAATGTAGAAATGCGACGGGTAC GACTTGTTGCTCCTGGAAAATGGATGTTGTGCGCATCATTTATTCTCCCCAAAAGTGTAGCATTTGCTAAAACCGCAGTT GATACTTGAGCAATTTTTGGATTGCCATTTAGTCATTACACAGTAAATTTTGTTCCCATTACGTTAGTTATTTACATTTT TTTTTTTGAAATGTAGTTATCTAAATTGATAATGTATATATGTAATTTAAATTTATTTTTCAAGAACTAGGGGTCTCTAG CATAACCAATTAGTAGATATTTAAAAAATAAATTCCATCATATACCTGTATTGAATTGTAAAAGCTCCTGGCGAGCTTTT GACTAATTCCGTGATAGATCTAAGCATATAGCCTGGATTGCTATTGCTAGTCAACTAGTGCTCCCTTTGCATGTACCATC TCAGTTAAAATTCTTGATAATAGAAGAAAACCTCAAAATTTTGCCATATTTTTTATTTTATCGTTTTCAATAAAAGAAAT GAATGCAGGCACTGTAGTAACCTGTTTTTTCTTTTGAAAAGTTGGCACTGTAGCAAC 

CDS sequence (LotjaGi3g1v0079700.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGATGATGATGGCAAGCCTATTCCTAAAGCCCCATCTTCATCTTGTTCATCTTCCTTCCAAACTCATTTTCCCCATCAC TCACAAACCTTCCCTTTCCCTTCCCACCACATTCTCTATCAAACACTTCACCACCACCACACTCTCCTATGGACCTTCCC TCTACAAAGGAACCACCCCATCCCAATCCCAATCTCAACACCAACTCCCTCTACCCCAAAACGACGTCGTTCTCCGCGAA GAAACCTTCACCAGAATCTACGACCTCGCCGCGCTCCGCGTCCCTTCCGCCGAGTGCTCCGCCTTAGAGAACCGCCTCCG CGGCCACCTCCTCAACTGGCCTCGCATTCGCAACATCGCTCGCGTCCCCGGCGACGACATCGACCCCAACCTCGCACCCC TCTTACCCAACGGTGACGACGGCGGAGAAGAAGAACAAGAAGGAAGCGCTCTCGTCTCGTTGCAGCGGCGCGTTCACGGC AAAGCGGACGGCGACGGCGAGGTTTTGAGCCCTGTGCTGTACCGGGAGAAGCTTGCGAACACGTTCAACAGTCGCGGGTT TGTCAATTTCCGGAACCTGGCGAAGATTTCGAGGCCGAATAGGAATAAGAAGAAGAAGAAGGAGGAGGAGGAGGAAGAGG GGAATGATAAAGTGGTTGAAGTTGAAGGGAGAAAGGGCTCTGGGAAGAACGATTTTGCGGCGGTTGAGGTTGTTGATGAT GATGAGGAGGAGGAAGAAGATGGTGGTTTGAGGAAGTTGTTAGGTGAAGGATTTGGGAGGAGGAAATGGAGGGGTTCCAC GAGGTTGTTGCTTTTGGATGAACGGTTCGCCGGTCATGGCGTGGAGGAGCTACCTGAGGCGATAAAGGCTGTCTTGAAGG AGTACACGGAAAAGAGTACAACTTTGACTTTTGAGCTAGTTAGATGCAGGCTAAAATTGTTTTATGATTACTGGCAGATG AATGAGACCTTGGAGGTGTTACTGCCTGAGGGTATGGTTGTTCCATCAGCTTTTGAGACTGTTGGTCATATTGCACACCT GAATTTGAGAGAGGAACATTTACCATACAAGAAGCTTATAGCAAAGGTTGTACTGGATAAAAATAAGCCAAAGATAAAAA CAGTTGTGAACAAGATTGATTCCATTCAAAATGAGTACAGGACCATGCAGCTTGAGGTTTTAGCAGGAAACCACTCTCTT GTGACTACAGTAGTTGAGAATGGAATTCGCTTTCAGGTTGACTTAGCAACAGTATATTGGAATTCTAGGCTTGCAACTGA AAGGCAAAGGCTTCTGAGTGGCTTTACACGAAATGATGTTATCTGTGATGTTTTCTCTGGAGTTGGTCCCTTAGCCATAT CTGCAGCAAGAATAGTTAAGCGTGTTTATGCTAATGACTTGAATCCATATGCCATTGAGTATCTGGAAAGAAATAGTGTT CTAAATAAACTTGAGAGGAAGATTAAGGTCTTTAACATGGATGGAAGAAGGTTCATTAAGGCTATATATGCCAGTGATAA AGCTCAGTCCATCACACAAGTGGTTATGAACTTGCCAAATGATGCTGCAGAATTTCTAGATGCATTTCGGGGAATATACA AAGATAGACCTAAGGATGGGGAATTTACTTTGCCAATGATCCATGTTTATGGATTCTCCAAAGCACGAGATCCAGAATTT GATTTTCATGAGAGAATAAGAATTGCGCTGCTAGAAGTGGCAGTCAATGTAGAAATGCGACGGGTACGACTTGTTGCTCC TGGAAAATGGATGTTGTGCGCATCATTTATTCTCCCCAAAAGTGTAGCATTTGCTAAAACCGCAGTTGATACTTGA 

Protein sequence (LotjaGi3g1v0079700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MMMMASLFLKPHLHLVHLPSKLIFPITHKPSLSLPTTFSIKHFTTTTLSYGPSLYKGTTPSQSQSQHQLPLPQNDVVLRE ETFTRIYDLAALRVPSAECSALENRLRGHLLNWPRIRNIARVPGDDIDPNLAPLLPNGDDGGEEEQEGSALVSLQRRVHG KADGDGEVLSPVLYREKLANTFNSRGFVNFRNLAKISRPNRNKKKKKEEEEEEGNDKVVEVEGRKGSGKNDFAAVEVVDD DEEEEEDGGLRKLLGEGFGRRKWRGSTRLLLLDERFAGHGVEELPEAIKAVLKEYTEKSTTLTFELVRCRLKLFYDYWQM NETLEVLLPEGMVVPSAFETVGHIAHLNLREEHLPYKKLIAKVVLDKNKPKIKTVVNKIDSIQNEYRTMQLEVLAGNHSL VTTVVENGIRFQVDLATVYWNSRLATERQRLLSGFTRNDVICDVFSGVGPLAISAARIVKRVYANDLNPYAIEYLERNSV LNKLERKIKVFNMDGRRFIKAIYASDKAQSITQVVMNLPNDAAEFLDAFRGIYKDRPKDGEFTLPMIHVYGFSKARDPEF DFHERIRIALLEVAVNVEMRRVRLVAPGKWMLCASFILPKSVAFAKTAVDT 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 4 4 -
Phobius 1 25 25 -
SignalP_GRAM_POSITIVE 1 15 15 -
Phobius 5 16 12 -
Phobius 17 25 9 -
Phobius 26 611 586 -
PANTHER 39 610 572 5.7E-261
PANTHER 39 610 572 5.7E-261
Hamap 75 600 526 25.738
MobiDBLite 130 151 22 -
MobiDBLite 199 218 20 -
MobiDBLite 203 218 16 -
Gene3D 318 397 80 3.5E-25
SUPERFAMILY 334 600 267 2.07E-63
Pfam 337 536 200 6.1E-63
ProSiteProfiles 338 600 263 107.011
Coils 372 392 21 -
Gene3D 400 600 201 1.6E-54
CDD 441 500 60 1.50008E-5

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function TRNA (guanine-N1-)-methyltransferase activity Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing N1-methylguanine.
Biological process TRNA methylation The posttranscriptional addition of methyl groups to specific residues in a tRNA molecule.

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0079700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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