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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0100000 |
| Transcript ID | LotjaGi3g1v0100000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | E3 ubiquitin-protein ligase; TAIR: AT4G25230.1 RPM1 interacting protein 2; Swiss-Prot: sp|Q8VYC8|RIN2_ARATH E3 ubiquitin protein ligase RIN2; TrEMBL-Plants: tr|I1KFP9|I1KFP9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0100000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:12435832..12445941) extracted from Lotus japonicus Gifu genome v1.2.
ATATATAGTCTCTCTTTTTCTTTTTCTTTCTCTTTCTACCTAAATTCTCTCTCCCTTCTGTCTTTGCGTTGATTCTGATT GCAGAAACCCCCAACCCTGCCTCCTCCACCCACCTCCTAGATCGAGTCAGGTTCTTTTCAATTTCAATTCCTATTTTTTC TCAAACTTTGGTTATGCATTTCTTATTTTCGAGTCAAAAATATTTCATTTTTTAGGGCTCCTCGATCACCCTTTGAATTT GTTGATTGATTTGGGTTTGTTGGGTTTTCTTCCAAATTTTCAATCTTTTTCGGAGTATGGTTCTAGGGCTATCTTCAATT TGAACTGGGTCAGTTGAAATTTCGTTGATGCGTGGATGGATTTTGTGTTGGGGGAGAATTTGGGATTGTATCAAATTTGG GTGTTAATGTTACAGAATAAAAGATGGAAATTCACATGTGCTAACTCTGGTTGCTGCATTTGAATTTGATTAGTAGCTGC AAAATTGAAAATTGAAATTGCCTTTTCATTTTGGTTGTTTAAACTAGTGAGTTGTTGTGGGGAGTTTTCATTTTTGAATT TTGCTGACTAGTTTTTTTATTGGTAGCATTTAAATGATCACTTGTTCTTTCTTTCTTTCTCTGTCAGGGTGTCCTATTTC ATTTGGAGACCTGAGATGGTAAATAGGTGACCGTATGATGGTGGCGTTTTAAGCTGATTTTATCAACTTTGCCCTCTGGT TCCATTGGATTTTGAACCATTTTAATGATGGGCAAAGGAAGACAGTAGTTTAAGTCAGATGAAAATCCAGAAGATTGGTT TTGGTAGAGAGGCTGAAGTTATTACTAATGGCTTTGAGGATTATAGCGGTTTCAGCGGTTTCAACAGTGTTAAGTTTTGT GGGTCTGCAGTTTTGCACAGACTTGTCATTAGATAAACTTAGATCAGATGGACTAATTGGCTGGAATTTAACTCAATTTG ACAACGCCAGCCATGACGTTGAGCTTGACGTTGAGGTACCTTTGGGTCTTTATACCACCATAGGGCTGCTGGCTAATTGC CTGATCAATATATTTGTCCTTCTCAATCTTTGTCTCAAGGTGAGTTTGTTGTATTAAAGTATTTATGGATCATGGAAATG TGTTTTGTTATTTGTGATGGTTTGTATGTTCAGTACTTCTCATGCTTTATTAGCAGAGTTTCTCCTGCTTCATTTCAAAC TAGGATAGAGGGTGAAACAAGTAGCTTTAAAATGGCTAGGGGCTCGAGTGGGATTAATTTTTTTTTAGGGGGAAGGAGTG AGAGGGGCTGTGAGTTGATATAAGAATAAGATTATAATGTTCCTGAAAATTATGATGGTGTTATTATTTGGGCCACCCGT TGTTGTTCCCACGTTCCAGTCTGTTCAATCCTGGACGTGAGGGGGTGTGTTAGAAGTCCCACATTGCCTAGAGATAAGGC CAATCAAGTGTTTATAAGGGTTGTGCAAACCTCAACTCTTGAGCTAGCTTTTGTGGTTGAGTATAGGCCTACCAATTTCT TATATGGTATCAGAGCCTATCCTAGATCCATTTGTTGTTTGTTGTGGAGACCTCCCATTATTGGGCCACCCGTTGTTGTT GATCCCACGTTCCAGGTTGTTCAGTCCTGGACGTGAGGGGGTGTGTTAGAAGTCCCACATTGGCTAGAGATAGAGCATAA ATAGCCTTTATAAGGGTAGTGCAAACCTTAACTCTTGAGCTAGCTTTTGGGTTGAGTATAGGCCCCCTAATTTCTGATAG TTATTATCAGTTGTTTTTATTGCCTGCTTACAAGCTTTTTTTCTTCAGAAAGGGGTTACAATTACAGTTTTCACACTATT TAATGGATGGTTTTTCTCTCTCTTTATTTAAGTAATCTAGTAGGCTAGGGTGTCCATGATTTTGTCCACGGCAGTATAGA TAATTTTTCCCGTTTGTCGGTTAATATTGTTCTTGCCATTTATGGTCTTTCTAATCACTTGCAGGCCGTGTTCTTCACAG AGTTGTATCCCTCTGAAACTCGTAAACTGATTGAACGTCTCATTAATTATGTCATTTACAAGGTTAGTGCTTTTCTGTAT GTGGTTAGTGCTTAGCAAAGTGGTTGTTTCTCTAAAATTATTGTTGAATCTAGATAGTGATACCGTATGGTTAGGAGCTA CTGCATTGATTACACATCGCTCTTTCTTTTCTTCTTTTGAAGAAAGATTTTTCTTTTTTGGTTGATATGTTTGTTTGGTG TTTGGAAATTGCTCATAAGATCTGTGTTTAAGTAAGATCTATTAATCTAGTATACATAATCACTTTCAGTCTTCCTTAGA CATTTGCATTATGAAATCTGTGATTCAATGGTTCATAGTGTGACAAATATAACCATAAGTGGCTGAGGATAGCTGCTGTG TATGATTTTTCTCTTGCTAGCCAATTTGACATGCAAGGATACTGGATACCAAGGGAAACTTCTTTTTTGTTTTGGCATTA TCTGCTTCAAATATCCACTTTTCATGATTGCATAACGGCAAAGCTTGTTGACATTATGAAATTATCTATATTGTTTGTTA CTTTGTTTTGACTTAGTTATGGCATTTCTGAGCAGCCGGTTTATAAATTTAAATGTAATTTAGGAACCTGTGAAATGCTC ATATGTCATAAATCAACACTACTCAATTACTATTTATTTGTGATGGTGGACGAGCAGGGGACGTTTCTACCACTGATTGT GCCACCAACAATTTATCAGGCAGGTCTTTGGTCAACTTGGCTGATTGTGCTTTGTTCTTTTAAGGTATATATTATACTAA ACAAGAACATATGGGATAATTGTGTTGATATTTGCTGTACCTTGACAAAACTAATGTTCATTAACATGTTCTGGCACATG GTTTACATATTGTGTAGATGTTTCAAGCTCTAGCTAGAGATCGCTTAGATCGGCTAAATGCATCTCCATCTGCTACACCC TGGACATATCTTCGTGTATATTCAGCACTGCTATTCATTTTCTTGGTTGATGTTCTCTGGTACGGTCATTCATTATTTTC TTCAATTCTGGAATAGTACCCCGTTCATGTTATTATACTATTGTTATGATCATTATTACAATAGAGTAGATTCCTCTAGT ATGTTAGCAAATCGTAGTTAATCCTTTAGTTACATGTTGCATTTAATTTAATTGATATGTAAATGATAGCCAAGAGTCTA GAATTTATGCTTTTCCTGTATAAGTTCATGGTATAATCAATCTGCGCTGGAGTACCTGTTTAGATTTAATTTTCAAAAAG GCTGAAACAATCACTACCACTATTGTCATTTTATAGCTTTGGAATGCTTCTGACACTTCCTTTTTTTATGCTTGTAGGAT AAGGCTTTGTCTGGCGACATATACAACACATGCGTCCTCTATGTTTCTGTTACTATTCTTTGAGCCTTTGAGTATTGCTT TTGAGACCCTACAGGTATTTAGAGTGCATCTTTGCAGATTCGAGACAATCATATCATATGGTCAAATTCCAATGAGGAAG TAATGCCTGGTTTAATGGTATTGTTTTCTGTGTGATATGAATTGTAGGCCATTTTGATACATGGATTTCAGTTGCTTGAC ATATGGCTTCATCATTCAGCTTGCCACAGCAGTGATTGCCGAATGCCTAAATTGCTTGATACATTAACCACAGGTAGTTT GGACAAAAAATCTGTTGTCGAGTGTGTTAATACCTCATCAATACGATTGGGGTACTAATAATATGTATCTGTGTTTATAT ATATATATATATATATATATATATATATATACACTATATAGGGGATGTATCTATATATATTATCTCTACTTTCCTCCTTG GATGCTTGCTTTATTTTGGTGGTTCGCAATGCTGATGTTATCTTCTGAACTATATGTCCTTTCTTTTATAAAATAAATTA GCATTCTTTTGATCAGCTTGTCTGCATGAGAATACAAACCTTGGTTTCTTCAATATGATTTGATTACATGGAAATGTAGA AGCCTGGTTTCATTATTCTAGTTTCCTGGAGGCATCTATTTGCTCACTGGTGGTTGTTTTGGCTTTTGAGAATGGTGGGT GTTTAACATATGTTTATGGTATGTTAGAGGATAAAAATGGGAAAAGGAAATAGGCTGGTACGTGTGCACGAGAGGTATTA GAATTTGGGAGGCCTAACTCTACCCGAAAAGCTAGCTTAGAGATGAGAATTGTCTTCCCAAATTCTAAGATGATATAGGC CTATCCTAGATCCATTTATTGGAAACTACCCATATATGGGCCACCCACATATGTTCATTCTTACAATCCCACGCTCCAGA TGTCCAGTCCTGGGCATGAGGGGGTGTGTTGAGAAGTCCCACATTGACTAGAGATATGACCAAGATAGCCCTTATATATG GGAAGGCAATCCTCACCTCTAACCTAGCTTTCAGGGTAGAGTTCGGCTTCCCAAATTCTAATAAGAGGAGAGGAAGAAGT ACTTTTATGAGTAAAAAGGAAGCGGTGAAGGGAGAATGTAACAGATTGTTCATGTGGCAGCAGGGTACTGGAGAGGAAAA TTCTCCAATGATGAGAGTAAAATAACAAGAATAAGGAGGAGGGGGAAGAGAGTGTGGGAAGCTAAACAGAACTTTGGAGA GTGTTTGATGGCTATGGCCAGGGAGGGCATAGTGTGGTTTCAGCCCAGATTGATCTTTTATCATGTTCAATTTGTTAAGT TTTTTGTTCATTGTGTTCTATTTGTGCTACTAACCAGAACTTGGTCTTTGTAAAGGGTTGTTATCATCGAGTTCCAATAC ATTTCCAATTTAATTCCATTATCTATCATTGAATTATGTAGACAGTGATATGCTGTAACACCACTTTCTCATTCAACTTA CTTTTTTCAGATTCCGAGTACCTAGGTTCTTTCTATTTTTTTATTGTTGTTTCTGTCAGTATAAATAGCTAATATTGCTG AAACAATGTGATTACTGTGAAGTTGTTTTGTTTCTTTCTTTTTTTTTTTTTGCTTTTTTTGGCGTCTTGATAAGTGGTAA CCTGCTTATTAACTTCTCCTGTGTTTTTCTGTAAAACCTTAATTTGTGCTTCCTTATTAAATGGGGTAACTGCAGGTTCG TTATTGGAATGGAAGGGAATTCTTATCCGGAACTTGGGTTTTTTCCTTGACATGGCAACTTTTCTTATGGCGCTTGGTCA TTACTTGTATATATGGCGGCTGCATGGCATGGCTTTCCATCTCGTAGATGCAGTGCTATTTCTGAATATACGTGTAAATA TTTGTGTCAATCTTTCATTGTTAATTCTGTGTGAATTTCACCATTCATAGAGATTTAAAAAGTTTTTTGCATATTCTGCT ACTTGTACTCATTGATGGTGCTTTGAGCAGGCATTGCTTAGTGCGATAATAAACCGCGTAAAAGGCTTTATCAAGCTAAG GATAGCTCTGGGAACACTTCATGCAGCTCTTCCCGATGCAACAACTGAAGAGCTAAGAACATATGATGATGAATGTGCTA TATGTAGAGTATGCTAGCTTGCCACTCTGTCTTTCTTGTTGATTGTGGTGATGATGTACTTTAGAATAATATTTCAATTA TGCTTATGGCAGGAGTCCATGGCTAAGGCTAAAAAGCTAAACTGTAATCACCTCTTCCATCTTGCATGTTTGAGATCTTG GTATGGTTTTGATTTATGGATTTTTATCCTTTTCTATTTGGGTTAGTTTTAGTGAGATACTTTTGGTTGCTAAATTGATT CTAGGTTGGATCAAGGCCTGACCGAGATATACACTTGTCCAACATGCCGAAAGCCACTTTTTGCAGGCCGGCCTGAAAAT GAAACAAACTCTAGTGCGGGAGTAATATCTAGTGATGAGCAACTTGCACGCCAAATGAGTGCAGGATTTGATCGGCCAAA CCCTGCCAGACATACCGTGCCTGCAGGATTCTATCAAAATCAGACACTGAACAACGCCGAAGGTGTTCCTCTAAGGTTCA ATCTTCACACTCCATTCTTCATGGTCTTCTGTCTCTTATTTTTTTTCTTTTGGCTGTTATTTATTTGTTGGAATTGTAAT TTTGAACAATTATTAAGTACAAGAACAGGATACAAAGTCATCCTAGCTCAGTGATCAACTAAACAAAAAAATACAAGAGC AGGAAAGTATAAGCTCAATTGAGCTCCTCAACCTCACAGTAATACCCCATAAAGAGACACATTTAAATACGAGCTGAAAT CCTTGAGGAAGCCAAGAAAACAGCTCCTTCGATAAAAAGGTTCTTGGAATAAATTTTCTACTGGAGATCTAGCAACTTCG TTTGCTTCATTGATAAATTCCACAATGTTGTAAAAGGACAGTGCTTCAGTGCCTTTTGTATTTCTTCCTTTTACCTAAAC CTCTGAAATAGATATACCGAAAGTATTCAAGAGACTGGTGAAACCCAGTGCAAGAAAAAAATTTGAAGTGACAAATATTA AGTTGGAGACCATCTCTCAATGTGGAAAATAGATTACTTTTTGGCTCTGAACTCTGATACTAGCTGTGTATGCCTGATCT AAAACTATATATTTGCATAAAATAAAGAGGGAGTAGGGGGTAGGGAGATACTTCTTTGTTCTACTGTCTTTCTCTTTGAA GAAGACTTGTTTTTTATCGGAACACTCACCTTTTTTTTATCGGAACACTCACCTTTTTTTTTTTACTTTTTTATTGAGAA CGTTATTAGCTTATTATTGCAATAAAATATACGGTTTTATTATATTTTATGTATTAATGCATTCTTTTTTGCTAATTTTT CCTGTTTTTTTTTTTAATCTAGGGGTCCAGGGCTGGACTCAGGTTGGTTGCATTCTTGGCCAAATCAAGGTATTGATGGA GCTGGTCCATCTACTGCTATCAGAACAGTTGGACTGGGAAGAGTTCAAATGATGATGAGGCATCTTGCATCTGTTGGAGA AACTTATGCTCAGACTGCCTTTGAAGATACTGCTTGGAACCTCTGGCCTATTAATCCCTCTCAGGCTTCTGCAAGTGGTT CAACCATTCCTTCCACTGGTGGAAGATTGCCAGGAGGAACTGGTAGTTTACATATAAGGACGCCTTCACGTTCGGCAAGT GATAATACAGCAAATTTACTTGCTATGGCCGACACTGTTCGGGAGGTCCTACCTCATATTCCAGATGACATAATATTCCA GGTATCTTTCGGATCTTTTGCATTATATAATGTGCCTTGGTCCAAAATAGTTTCCATCTTTTGTAATAAAATTCACACCT TCCTCACCTCTCTCTGGCCTGCTTTCATGTTTCAAGTCAGCTACAAAAGTATCTTCCATGTTTATTCCATTCGGTCTCAT CGTTGTTGCTCACGTGAGACATTAACCTACTGCCTTCCCTTTGTTTATCCTCACATATATTCCAGTATGAGGAGAATATC TTTACTCTGTTACAAACCCATCAACTTTGCTTAATCATGCCTGTAACACACAGTTAAGGAACTTGTTCAGATAATAGACC TTTAAAACTTCCTTAATGTCTAAACTATTCCCCAATTCTGTCAATGAGATATAATTGCACTACTGTAGTGAGACAGACAT GTGTTTACTATTTCTGACACACGTCTTCATCAGAAGTCTTTTTTAACCTCTTGAGGGTAAAATAGGTTGGCTATAAATAA GATAATAAAAATATAATGCTGAAAATTGTCATCATTCAGTTTTGTACAATTGCTTGCTGTTCAACATTCTAACATTAAAG TCTCCCAACCTGCTCTACCAAAAGCAGTCATGTAACCGTTGGCACTCAGACACATTTAGCCTCTCATTCTTCAGAATTAC AGTGCATATTATGGCACTGTATAGCACATCTAAACAGCTGAATCAGTTCACTACAATCCTTGAAACAATATAAATCTTTA CTGATAATATACGCTAAAGCATAGTGTACTTCTGTTATCTCACCCAAATGAGCATGTGGAGATAAAAACCTATAGGCCTT ATTATTTACTGGATCTTTGTCTTTGGTTAGAAAGATATTGAGAGAATTTATTATGTAGAGTTTCATGGGTGGCAAGGGTA AGACGGAGAAATCAGAGTGGGTTTGAGAAGGTTGTAGGTGATTGGGGTTATTGGAAATGGCAAAGTTTCAGAAGATCTCG GTGAGGACTTTGATTTTGTTTGGGTGTTGGACTTTCATAGAGTGCTGATGAATAAAGCTCTGGTGGAGCTTCAACGTTGG CACCCTGGGCAATGTGTGGACATTTTTTTTGTCCCTTTTTATCTGAATTTAATTTTTTACCTGTTAATGAATTTGCTTCT TTGATTTTTTTGGGGGAACTGTTAGTAACTCATGATTGGAGGATGCCTTATCTATTAGTTAGCAAGTGGAGATCCTTTAG GGGATTGCCATCAAATACTTTGATAGGCTTTGGTTGGAAGGTTCTGATTCCAAGATTCAAAAGGTTTTAAGGCTTTATTT CTGTAGTTGATGGGGTGTCTTTGCAATCAACCAATAGTTTAAGTTATTTACTTTTTCTTGGTCTTTAACTTTTATCATGG AGATTGCTGCTTGATGCACATAAGGTGATAGAATCTGAGGCGTTTTGATTACTGCAGGACTTGCAACAAACAAATTCTGT CACCGTTACTGTGAATAATCTTCTCCAAATGTGACGTATTAAGGTAATATTTTGCATATCAAGGGTTATGAAAAATCAAG GACGTAGAGCTGCAATTGTCCTTGGAAAGGCATAGGTTACATTTTATGTATATAGAGTCAGCACATTTAATCTGTTGTAC TCAACAAGAAAGATAGCAGAAAATATAGGCTTTTTCTTTCTCTTTCTGTTCCTCTTGAATCTGTAGTAAAATAAATGTGG TATATGTTTCCAAGTTGAGCCGGTTCCTTTCTGTTGTTCCATTTCAATTGTAATTTTGAAGTTTGAATCTGCTGCTCCCT CAAAATATGCTGTAATTTTAATTTTCTCTCCATTTTGTGAGACTGTGAGAGGTACCTCAAAGTTTGAGGTATCAATTATC TTCAAATGATTCAATTTGGGCCATGTAGGATCTGACTTGAATGTGTCCAATAAACTCATATACATGTCCAAATGTCAGGG ATAGGGGTCTCTATTATGGTGTGATTAGTAGATCAGCATAGAAGCTGTATTCATAGTTGATGCTACAGAGCTCACCCACA CCCTCTTAATAGCAAATTGTCACAATAAGTGAGTATTTTTTTTTTCTGAAAAGGAATATTATGTTCTCTTCATGGATTAG TATTCTACTAGTTTCATATTTCATTAGTTAAATTAAGGCCTAATTGTACTTTTAGTCCTTGAAGTAACACAATTGTTTCA TTGTGGTCCCTTTTTTTTAAAGTGAGCTATTTGGACTTAAAAAAAACGTAATTGTTTGATTTTCATCCTTCCACTAAGTT TTTATCCAAAATCTAATGTTGTTTGTCTAATTAGCCTTTCTATTCGCACAGTTTCTTCTAATTGCACCCTCATTTCTTCT ATTTGCACCCCTATTTGCACCACCTTCCCTTGTTTCTCCCAATTGCACTCGCATTGAAGACACATTAGTAATTAAAATTA ATAAAAAAGAAAATAAATAAAACAAATTAATTAAAATTGAAATAACCCTAAACAATATTTTTTAATCCATAAATTAAATC TCTGTTGAACAAATCCAGAATTAAATCTGAAACAACTACATAACTAATTTTTTTTCAAATCATTTTTTTTCAACCCTTCT TCATCTTTCTCTCTGTTCATCACAACACCACCACCCTACCACCACAACACGTTGTACGACCACCACCCTTCTTCATCAAA CCTAGATCTCATGCAAAGCGCCCTCCGGTTACCGCCGTCGAGATCAAGTGAAGTACCGTCATTGTAGAAAGTGAAACTTC GTCGTTGTTGTTGAAGGAGGGCACAATCGACTAGAAACCTCTCTTTGTCACCATCTCCCCAGAAAACATAATCGAAGGTC ATTGATCTGGGTTGATCTGGTGTTGTTGATCATCGATTTGATTTTGACTTGAATGAGTGTTGCTGATGCTCGCTGGTCAT TGATCGGGTTCGAAGGAGGGTTTTGCGGTG
CDS sequence (LotjaGi3g1v0100000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTTGAGGATTATAGCGGTTTCAGCGGTTTCAACAGTGTTAAGTTTTGTGGGTCTGCAGTTTTGCACAGACTTGTC ATTAGATAAACTTAGATCAGATGGACTAATTGGCTGGAATTTAACTCAATTTGACAACGCCAGCCATGACGTTGAGCTTG ACGTTGAGGTACCTTTGGGTCTTTATACCACCATAGGGCTGCTGGCTAATTGCCTGATCAATATATTTGTCCTTCTCAAT CTTTGTCTCAAGGCCGTGTTCTTCACAGAGTTGTATCCCTCTGAAACTCGTAAACTGATTGAACGTCTCATTAATTATGT CATTTACAAGGGGACGTTTCTACCACTGATTGTGCCACCAACAATTTATCAGGCAGGTCTTTGGTCAACTTGGCTGATTG TGCTTTGTTCTTTTAAGATGTTTCAAGCTCTAGCTAGAGATCGCTTAGATCGGCTAAATGCATCTCCATCTGCTACACCC TGGACATATCTTCGTGTATATTCAGCACTGCTATTCATTTTCTTGGTTGATGTTCTCTGGATAAGGCTTTGTCTGGCGAC ATATACAACACATGCGTCCTCTATGTTTCTGTTACTATTCTTTGAGCCTTTGAGTATTGCTTTTGAGACCCTACAGGCCA TTTTGATACATGGATTTCAGTTGCTTGACATATGGCTTCATCATTCAGCTTGCCACAGCAGTGATTGCCGAATGCCTAAA TTGCTTGATACATTAACCACAGGTTCGTTATTGGAATGGAAGGGAATTCTTATCCGGAACTTGGGTTTTTTCCTTGACAT GGCAACTTTTCTTATGGCGCTTGGTCATTACTTGTATATATGGCGGCTGCATGGCATGGCTTTCCATCTCGTAGATGCAG TGCTATTTCTGAATATACGTGCATTGCTTAGTGCGATAATAAACCGCGTAAAAGGCTTTATCAAGCTAAGGATAGCTCTG GGAACACTTCATGCAGCTCTTCCCGATGCAACAACTGAAGAGCTAAGAACATATGATGATGAATGTGCTATATGTAGAGA GTCCATGGCTAAGGCTAAAAAGCTAAACTGTAATCACCTCTTCCATCTTGCATGTTTGAGATCTTGGTTGGATCAAGGCC TGACCGAGATATACACTTGTCCAACATGCCGAAAGCCACTTTTTGCAGGCCGGCCTGAAAATGAAACAAACTCTAGTGCG GGAGTAATATCTAGTGATGAGCAACTTGCACGCCAAATGAGTGCAGGATTTGATCGGCCAAACCCTGCCAGACATACCGT GCCTGCAGGATTCTATCAAAATCAGACACTGAACAACGCCGAAGGTGTTCCTCTAAGGGGTCCAGGGCTGGACTCAGGTT GGTTGCATTCTTGGCCAAATCAAGGTATTGATGGAGCTGGTCCATCTACTGCTATCAGAACAGTTGGACTGGGAAGAGTT CAAATGATGATGAGGCATCTTGCATCTGTTGGAGAAACTTATGCTCAGACTGCCTTTGAAGATACTGCTTGGAACCTCTG GCCTATTAATCCCTCTCAGGCTTCTGCAAGTGGTTCAACCATTCCTTCCACTGGTGGAAGATTGCCAGGAGGAACTGGTA GTTTACATATAAGGACGCCTTCACGTTCGGCAAGTGATAATACAGCAAATTTACTTGCTATGGCCGACACTGTTCGGGAG GTCCTACCTCATATTCCAGATGACATAATATTCCAGGACTTGCAACAAACAAATTCTGTCACCGTTACTGTGAATAATCT TCTCCAAATGTGA
Protein sequence (LotjaGi3g1v0100000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALRIIAVSAVSTVLSFVGLQFCTDLSLDKLRSDGLIGWNLTQFDNASHDVELDVEVPLGLYTTIGLLANCLINIFVLLN LCLKAVFFTELYPSETRKLIERLINYVIYKGTFLPLIVPPTIYQAGLWSTWLIVLCSFKMFQALARDRLDRLNASPSATP WTYLRVYSALLFIFLVDVLWIRLCLATYTTHASSMFLLLFFEPLSIAFETLQAILIHGFQLLDIWLHHSACHSSDCRMPK LLDTLTTGSLLEWKGILIRNLGFFLDMATFLMALGHYLYIWRLHGMAFHLVDAVLFLNIRALLSAIINRVKGFIKLRIAL GTLHAALPDATTEELRTYDDECAICRESMAKAKKLNCNHLFHLACLRSWLDQGLTEIYTCPTCRKPLFAGRPENETNSSA GVISSDEQLARQMSAGFDRPNPARHTVPAGFYQNQTLNNAEGVPLRGPGLDSGWLHSWPNQGIDGAGPSTAIRTVGLGRV QMMMRHLASVGETYAQTAFEDTAWNLWPINPSQASASGSTIPSTGGRLPGGTGSLHIRTPSRSASDNTANLLAMADTVRE VLPHIPDDIIFQDLQQTNSVTVTVNNLLQM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 23 | 23 | - | – | |
| Phobius | 1 | 4 | 4 | - | – | |
| Phobius | 5 | 15 | 11 | - | – | |
| TMHMM | 5 | 24 | 20 | - | – | |
| Phobius | 16 | 23 | 8 | - | – | |
| Phobius | 24 | 58 | 35 | - | – | |
| Phobius | 59 | 83 | 25 | - | – | |
| TMHMM | 61 | 83 | 23 | - | – | |
| PANTHER | 65 | 405 | 341 | 2.3E-53 | – | |
| PANTHER | 65 | 405 | 341 | 2.3E-53 | – | |
| Phobius | 84 | 102 | 19 | - | – | |
| TMHMM | 103 | 125 | 23 | - | – | |
| Phobius | 103 | 122 | 20 | - | – | |
| Phobius | 123 | 127 | 5 | - | – | |
| Phobius | 128 | 145 | 18 | - | – | |
| Phobius | 146 | 165 | 20 | - | – | |
| TMHMM | 161 | 183 | 23 | - | – | |
| Phobius | 166 | 188 | 23 | - | – | |
| Phobius | 189 | 193 | 5 | - | – | |
| Phobius | 194 | 216 | 23 | - | – | |
| TMHMM | 196 | 218 | 23 | - | – | |
| Phobius | 217 | 260 | 44 | - | – | |
| TMHMM | 256 | 278 | 23 | - | – | |
| Phobius | 261 | 280 | 20 | - | – | |
| Phobius | 281 | 285 | 5 | - | – | |
| TMHMM | 285 | 307 | 23 | - | – | |
| Phobius | 286 | 307 | 22 | - | – | |
| Phobius | 308 | 590 | 283 | - | – | |
| Gene3D | 317 | 392 | 76 | 4.1E-18 | ||
| SUPERFAMILY | 329 | 390 | 62 | 2.52E-18 | – | |
| Pfam | 340 | 384 | 45 | 1.4E-8 | ||
| SMART | 342 | 383 | 42 | 3.6E-7 | ||
| ProSiteProfiles | 342 | 384 | 43 | 12.578 | ||
| PANTHER | 542 | 588 | 47 | 2.3E-53 | – | |
| PANTHER | 542 | 588 | 47 | 2.3E-53 | – | |
| Gene3D | 548 | 589 | 42 | 2.7E-11 | – | |
| ProSiteProfiles | 550 | 590 | 41 | 13.435 | ||
| Pfam | 554 | 590 | 37 | 3.5E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi3g1v0100000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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