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The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.
We have found 57 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 5.489s to perform.
| Transcript | Name | Description | Chr | Start | End | Strand | Domain predictions | GO predictions |
|---|---|---|---|---|---|---|---|---|
| n.a. | PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Cicer arietinum] gi|502154028|ref|XP_004509555.1| | chr0 | 9801079 | 9818629 | - | – | ||
| n.a. | PREDICTED: DNA (cytosine-5)-methyltransferase CMT2-like [Cicer arietinum] gi|502154028|ref|XP_004509555.1| | chr0 | 9801079 | 9818629 | - | – | ||
| n.a. | PREDICTED: chromo domain-containing protein LHP1-like [Glycine max] gi|356560656|ref|XP_003548606.1| | chr0 | 13536996 | 13542944 | + | – | ||
| n.a. | PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial-like [Solanum lycopersicum] gi|460387771|ref|XP_004239547.1| | chr0 | 19946097 | 19946796 | - | – | ||
| n.a. | Ty3/gypsy retrotransposon protein [Beta vulgaris subsp]. vulgaris] gi|387965727|gb|AFK13856.1| | chr0 | 105434805 | 105438677 | - | – | ||
| n.a. | ty3-gypsy retrotransposon protein [Cucumis melo subsp]. melo] gi|307135885|gb|ADN33750.1| | chr0 | 123711578 | 123712568 | - | – | ||
| n.a. | PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein phosphatase 4 regulatory subunit 3-like [Cucumis sativus] gi|449529986|ref|XP_004171978.1| | chr1 | 1619268 | 1619887 | - | – | ||
| n.a. | PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like isoform X2 [Cicer arietinum] gi|502164095|ref|XP_004513047.1| | chr1 | 15425089 | 15431773 | - | – | ||
| n.a. | PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like isoform X2 [Cicer arietinum] gi|502132460|ref|XP_004501371.1| | chr1 | 22216700 | 22231340 | + | – | ||
| n.a. | PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like [Glycine max] gi|356515042|ref|XP_003526210.1| | chr1 | 22216700 | 22234993 | + | – | ||
| n.a. | PREDICTED: CHD3-type chromatin-remodeling factor PICKLE-like isoform X2 [Cicer arietinum] gi|502132460|ref|XP_004501371.1| | chr1 | 22216700 | 22234993 | + | – | ||
| n.a. | PREDICTED: chromodomain-helicase-DNA-binding protein 3-like [Cicer arietinum] gi|502111276|ref|XP_004494007.1| | chr1 | 54828110 | 54840792 | - | – | ||
| n.a. | T32E20.30 [Arabidopsis thaliana] gi|8778789|gb|AAF79797.1|AC020646_20 | chr2 | 684010 | 684459 | + | – | ||
| n.a. | PREDICTED: flap endonuclease GEN-like 2-like [Cicer arietinum] gi|502175270|ref|XP_004515700.1| | chr2 | 4847045 | 4861167 | + | – | ||
| n.a. | PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Glycine max] gi|356540854|ref|XP_003538899.1| | chr2 | 25636629 | 25641052 | + | – | ||
| n.a. | PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Glycine max] gi|356495335|ref|XP_003516534.1| | chr2 | 25636629 | 25642737 | + | – | ||
| n.a. | PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Glycine max] gi|356501409|ref|XP_003519517.1| | chr2 | 39358712 | 39364746 | - | – | ||
| n.a. | PREDICTED: MYST-like histone acetyltransferase 2-like isoform X2 [Cicer arietinum] gi|502127234|ref|XP_004499615.1| | chr3 | 9723052 | 9730373 | - | – | ||
| n.a. | PREDICTED: signal recognition particle 43 kDa protein, chloroplastic-like [Cicer arietinum] gi|502144378|ref|XP_004505675.1| | chr3 | 43292998 | 43294401 | - | – | ||
| n.a. | PREDICTED: signal recognition particle 43 kDa protein, chloroplastic-like [Glycine max] gi|356538524|ref|XP_003537753.1| | chr3 | 43293136 | 43317191 | - | – | ||
| n.a. | Chromatin remodeling complex subunit [Theobroma cacao] gi|508704985|gb|EOX96881.1| | chr4 | 2917943 | 2935630 | - | – | ||
| n.a. | Ty3/gypsy retrotransposon protein [Beta vulgaris subsp]. vulgaris] gi|387965727|gb|AFK13856.1| | chr4 | 22976477 | 22977570 | - | – | ||
| n.a. | Ty3/gypsy retrotransposon protein [Beta vulgaris subsp]. vulgaris] gi|387965727|gb|AFK13856.1| | chr5 | 10791807 | 10792945 | - | – | ||
| n.a. | Ty3/gypsy retrotransposon protein [Beta vulgaris subsp]. vulgaris] gi|387965727|gb|AFK13856.1| | chr6 | 19548223 | 19548596 | - | – | ||
| n.a. | PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 3, mitochondrial-like [Solanum lycopersicum] gi|460387771|ref|XP_004239547.1| | chr6 | 25132514 | 25135343 | + | – | ||
| n.a. | Chromodomain helicase-DNA-binding protein; TAIR: AT2G13370.1 chromatin remodeling 5; Swiss-Prot: sp|F4IV99|CHR5_ARATH Protein CHROMATIN REMODELING 5; TrEMBL-Plants: tr|I1JIZ0|I1JIZ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0048100 | LjG1.1_chr1 | 6587260 | 6606896 | + | – | ||
| n.a. | Chromodomain helicase-DNA-binding protein; TAIR: AT2G13370.1 chromatin remodeling 5; Swiss-Prot: sp|F4IV99|CHR5_ARATH Protein CHROMATIN REMODELING 5; TrEMBL-Plants: tr|I1JIZ0|I1JIZ0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0048100 | LjG1.1_chr1 | 6588518 | 6606460 | + | – | ||
| n.a. | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|B5U9W0|B5U9W0_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0048500_LC | LjG1.1_chr1 | 6637079 | 6696859 | + | – | ||
| n.a. | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|B5U9W0|B5U9W0_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0048500_LC | LjG1.1_chr1 | 6642053 | 6674912 | + | – | ||
| n.a. | Gypsy/Ty3 element polyprotein, putative; TAIR: AT1G42190.1 GAG/POL/ENV polyprotein; Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|B5U9W1|B5U9W1_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0100200_LC | LjG1.1_chr1 | 15249593 | 15251453 | + | – | ||
| n.a. | Chromatin remodeling factor CHD3 (Pickle); TAIR: AT2G25170.2 chromatin remodeling factor CHD3 (PICKLE); Swiss-Prot: sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE; TrEMBL-Plants: tr|A0A151TT78|A0A151TT78_CAJCA CHD3-type chromatin-remodeling factor PICKLE; Found in the gene: LotjaGi1g1v0378800 | LjG1.1_chr1 | 85909793 | 85928018 | + | – | ||
| n.a. | Chromatin remodeling factor CHD3 (Pickle); TAIR: AT2G25170.1 chromatin remodeling factor CHD3 (PICKLE); Swiss-Prot: sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE; TrEMBL-Plants: tr|A0A151TT78|A0A151TT78_CAJCA CHD3-type chromatin-remodeling factor PICKLE; Found in the gene: LotjaGi1g1v0378800 | LjG1.1_chr1 | 85909793 | 85928018 | + | – | ||
| n.a. | Chromatin remodeling factor CHD3 (Pickle); TAIR: AT2G25170.2 chromatin remodeling factor CHD3 (PICKLE); Swiss-Prot: sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE; TrEMBL-Plants: tr|A0A151TT78|A0A151TT78_CAJCA CHD3-type chromatin-remodeling factor PICKLE; Found in the gene: LotjaGi1g1v0378800 | LjG1.1_chr1 | 85909807 | 85928015 | + | – | ||
| n.a. | chromatin remodeling factor; TAIR: AT1G08060.1 ATP-dependent helicase family protein; Swiss-Prot: sp|Q9M658|MOM1_ARATH Helicase protein MOM1; TrEMBL-Plants: tr|I1JPN1|I1JPN1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0690100 | LjG1.1_chr1 | 125764441 | 125779667 | + | – | ||
| n.a. | chromatin remodeling factor; TAIR: AT1G08060.1 ATP-dependent helicase family protein; Swiss-Prot: sp|Q9M658|MOM1_ARATH Helicase protein MOM1; TrEMBL-Plants: tr|I1JPN1|I1JPN1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0690100 | LjG1.1_chr1 | 125764500 | 125779323 | + | – | ||
| n.a. | Flap endonuclease 1; TAIR: AT3G48900.2 single-stranded DNA endonuclease family protein; Swiss-Prot: sp|Q9M2Z3|GENL2_ARATH Flap endonuclease GEN-like 2; TrEMBL-Plants: tr|K7MIH1|K7MIH1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0144600 | LjG1.1_chr2 | 52367265 | 52382060 | - | – | ||
| n.a. | Cytosine-specific methyltransferase; TAIR: AT1G69770.1 chromomethylase 3; Swiss-Prot: sp|Q94F88|CMT3_ARATH DNA (cytosine-5)-methyltransferase CMT3; TrEMBL-Plants: tr|K7K149|K7K149_SOYBN Cytosine-specific methyltransferase; Found in the gene: LotjaGi2g1v0224800 | LjG1.1_chr2 | 68096866 | 68105831 | - | – | ||
| n.a. | Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT1G42190.1 GAG/POL/ENV polyprotein; Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A0L9VIM9|A0A0L9VIM9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0315400_LC | LjG1.1_chr2 | 79104146 | 79108021 | - | – | ||
| n.a. | Cytosine-specific methyltransferase; TAIR: AT1G80740.1 chromomethylase 1; Swiss-Prot: sp|C0SQ89|CMT3_ORYSJ DNA (cytosine-5)-methyltransferase CMT3; TrEMBL-Plants: tr|I1J8E3|I1J8E3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0356800 | LjG1.1_chr2 | 83309833 | 83316196 | + | – | ||
| n.a. | Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT3G47920.1 Ta11-like non-LTR retrotransposon; Swiss-Prot: sp|P0CT34|TF21_SCHPO Transposon Tf2-1 polyprotein; TrEMBL-Plants: tr|A0A1J7HN03|A0A1J7HN03_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0001900_LC | LjG1.1_chr3 | 261199 | 262219 | - | – | ||
| n.a. | Histone acetyltransferase; TAIR: AT5G09740.1 histone acetyltransferase of the MYST family 2; Swiss-Prot: sp|Q9FLF7|MYST1_ARATH Histone acetyltransferase of the MYST family 1; TrEMBL-Plants: tr|G7IVB8|G7IVB8_MEDTR Histone acetyltransferase; Found in the gene: LotjaGi3g1v0100200 | LjG1.1_chr3 | 12452029 | 12459531 | + | – | ||
| n.a. | Histone acetyltransferase; TAIR: AT5G09740.2 histone acetyltransferase of the MYST family 2; Swiss-Prot: sp|Q9FLF7|MYST1_ARATH Histone acetyltransferase of the MYST family 1; TrEMBL-Plants: tr|A0A176VBZ0|A0A176VBZ0_MARPO Histone acetyltransferase; Found in the gene: LotjaGi3g1v0100200 | LjG1.1_chr3 | 12452140 | 12459011 | + | – | ||
| n.a. | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|B5U9V8|B5U9V8_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0167800_LC | LjG1.1_chr3 | 22908891 | 22913848 | + | – | ||
| n.a. | Chromo domain-containing protein LHP1; TAIR: AT5G17690.1 like heterochromatin protein (LHP1); Swiss-Prot: sp|Q946J8|LHP1_ARATH Chromo domain-containing protein LHP1; TrEMBL-Plants: tr|A0A0R0FVG1|A0A0R0FVG1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0259700 | LjG1.1_chr3 | 47421815 | 47428561 | + | – | ||
| n.a. | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|B5U9V8|B5U9V8_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0423100_LC | LjG1.1_chr3 | 83213133 | 83230005 | + | – | ||
| n.a. | Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|B5U9V8|B5U9V8_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0423100_LC | LjG1.1_chr3 | 83213206 | 83227217 | + | – | ||
| n.a. | Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT3G06350.1 dehydroquinate dehydratase, putative / shikimate dehydrogenase; Swiss-Prot: sp|Q9UR07|TF211_SCHPO Transposon Tf2-11 polyprotein; TrEMBL-Plants: tr|A0A0L9VIM9|A0A0L9VIM9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0434100_LC | LjG1.1_chr3 | 84547161 | 84560561 | - | – | ||
| n.a. | Chromodomain-helicase-DNA-binding family protein; TAIR: AT5G44800.1 chromatin remodeling 4; Swiss-Prot: sp|F4KBP5|CHR4_ARATH Protein CHROMATIN REMODELING 4; TrEMBL-Plants: tr|K7KPZ4|K7KPZ4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0022000 | LjG1.1_chr4 | 2675963 | 2693714 | - | – | ||
| n.a. | Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT5G17690.1 like heterochromatin protein (LHP1); Swiss-Prot: sp|Q9WTK2|CDYL_MOUSE Chromodomain Y-like protein; TrEMBL-Plants: tr|A0A1J7FN67|A0A1J7FN67_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0079800_LC | LjG1.1_chr4 | 10433963 | 10437437 | + | – | ||
| n.a. | Mortality factor 4-like protein 1; TAIR: AT4G37280.1 MRG family protein; Swiss-Prot: sp|Q94C32|MRG1_ARATH Protein MRG1; TrEMBL-Plants: tr|I1K283|I1K283_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0100000_LC | LjG1.1_chr4 | 13599570 | 13627503 | + | – |