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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0103200 |
| Transcript ID | LotjaGi3g1v0103200.9 |
| Related isoforms 8 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ABC transporter C family protein; TAIR: AT2G34660.3 multidrug resistance-associated protein 2; Swiss-Prot: sp|Q42093|AB2C_ARATH ABC transporter C family member 2; TrEMBL-Plants: tr|V7BS39|V7BS39_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0103200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:12779988..12784490) extracted from Lotus japonicus Gifu genome v1.2.
ATGCTAGATAAAATCCTGAGCGCTCCAATGATATTCTTCCAAACCAACCCTGTTGGTCGCATAATTAATAGGTTTGCAAA AGACACGGGAGATATAGATATGTATGTTTTTGCGTTGGTGAATGGGTTTCTGGGGCAAGTGTGGCAGTTAGTTTCGACAT TTGTTCTTATCGGCACAGTGAGCACCATATCCCTGTGGGCCATAATGCCACTACTTACCATCTTTTATGCAGCTTATATT TATTACCAGGTATGTTCTATACCTTGTCCTTAGCTTTAGAGTAATGAGTAATCTCGTGTAGAAATGTTTTACCTTGCCAA ATTGATTTTACCTGCTTTTGTAGTATAGATTCTCTTTTATATCTATATAGAAATGCAGATGAACAGTGACTAAATAGTGG GTTAGTGCAAACTGGATGTTTCCAGAATAACTTATACTGAGAGTTAGGATTTTGCTTTCATCAAAGTCCAGGTTAGGAGT ACCAGCATCGATTCGGGGCTGATCAGGATTGACCAAAATCCAGATTTTTCTAGAAATATTAGCATTCTGTTGCAACTTGT ACTTAGGGTTACAAGGGAAAATATTCACATTTCTGGACATTGGTATCCTTATACAGCACAGAGATTAATCAAACTGTTTC CTGATGCACACTTAATACAATTATAATCTCCAAAATTCATAATTGAATCATAGTAACATTATACCTGCTAGATCCATTTC CTAAAGAAGCCGGGTTGATAGTCCAAGTAACTAAAATCTTAACTTTTATCCTTTTTACTAGCAGTAGCAGGAATAGTTAA GATGAATAATATTTCCTCTGTAATAAAGCTTAATCTATAGACCTTCATATACACACCGTTTCTTATTCTCCACTGCGCCT CTGTAGTATTCTTATTCTTTGCAAAGAAGGTGCAAGGTAAAGTATAGGTCAGTGATGCAGAAACTATTGGAAGTTACAAA CCTTTGTAAAGAATGTCTAAAAATGGATTTCAAGTGAAGGTTTGATGACAAAAAACATCATTTTGAATTGACAGTTAACA CTAAGTGATCATGGTTTTAGGAATTGACTTTTCCTGTTAACACCATGCCTAACAGAGCACAGCTCGAGAGGTGAAGCGCT TGGATTCCATTACAAGATCTCCTGTTTATGCGCATTTTGGGGAATCATTGAATGGTTTGTCAAGCATTCGCGCTTACAAA GCATATGATAGGATGGCACAGATCAATGGAAAATTCATGGATAACAACATAAGATTCACTCTTGTCAACATTAGTTCGAA CCGGTGGTTGACCATAAGGTTAGAATCATTAGGAGGCCTCATGATTTGGTTGATAGCAACATTCGCTGTCCTGCAAAATG GAAGAGCTGAAAACAAGGCAATGATTGCGTCTTCAATGGGCCTACTTCTCAGTTACACTTTGAACATAACAAATCTCTTG AGCGGTGCCCTCAGACAAGCAAGCAGAGCTGAGAACAGTCTAAATGCGGTTGAGCGCGTTGACACCTATATAAATTTAGA ATCCGAGGCTCCAGGTATAGTTGAGGAAAACCGTCCACCACCAGGATGGCCGACAACTGGATCGATTGAGTTTGAGAATG TTGTTCTCACATACAGGCCTGAACTTCCTCCAGTTCTGCATGGAGTGTCTTTCACAGTATGTCCAACTGAGAAGATAGGG GTAGTTGGAAGAACTGGTGCAGGAAAGTCTAGCATGCTTAATGCGTTATTCCGGATTGTGGAACTACAAAGAGGAAGAAT CACTATTGATGGTTGTGATGTTTCGACAATTGGACTAGCAGATCTGCGAAAAGTTCTCACCATCATACCGCAATCGCCAG TTCTGTTCTCTGGTATGCACTATATAACCTGAAATATTGTTCTGTCATATCTAGATAATCAAGCATGAGTTTAGTTTTAA TCCACTTTCAGCAAGGCTTTTAATCAAGTCGCATTACAGGCCAATCCAGACAAAAAATGTTGTAGACTTGTAGTACCTAG ATGTCTACGATACATCAAGTGACACTAACTGAGATTTAAAATTTAACTGTCTATGTATAATTTTTACACTATCATCTAAT CACACATTAGCACATTATTATAAAACAAGTTTCAAGCAGTTATTTTTGTATTCAAACTCTCTTAGTAATGAAGCAATAAT TGAGATGATGATAGTGTAAAATATGACATTAAAGATCAAGGTTAAATCCTAGAAAACTTATGTTCTAGCTCACTAATAAT CCTGGTTATTAGTCCTATTCTTGGCCAAAATAGAATACAAGAATTATGGCATTTTTTATTGTAGTGTTTTAGGTTTTCAC TTAAGTTGTGGATAAGCGTTTTCCAATAACTGGCAACTGCACTATACCTTTTCCGTTCTGAAAATCGTTAATCTTTCTCT TAGGAACTGTTCGCTTCAATCTTGATCCATTTAATGAACACAATGATGCTGACCTATGGGAATCTTTAGAAAGGGCGCAT TTGAAGGATGTAATTAGAAGAAATCCACTTGGCCTAGATGCTCAGGTATTATGGTATAATTTTAGTCATTGAAGTTTCCC ATATATACAAGAAGTATAAGTAGATATATAATATTTGAACATGTTTTGCATATATAGGAGTCATCATAACTTTATGAAGT GAATTTTATTCAAACAGTCTAGTTTTCTGAACAATAGTTGGAAATATATGATATGTTTTGTGTAAATTGGTTTTTCTTGG AGTGTTTTTGAGTTCTCAATTGAAAAGATGAAATTGACAATGTAGTCTCTTCTACACTTAATTAAGGTTTCAGAGGGAGG AGACAATTTCAGTGTTGGACAGAGGCAACTCATAAGTCTAGCAAGAGCATTGCTACGAAGATCAAAGGTTCTTGTCCTGG ATGAAGCTACTGCTGCTGTAGATGTTAGAACAGATGCCCTTATCCAGAAAACTATCCGACAAGAATTCCAGTCTTGCACC ATGCTCATCATTGCACACAGATTAAATACAATTATTGACTGCGATCGGATTCTGTTGCTTGATGCTGGCCGGGTAAATTC AATTAGCATAATTTACAGATGTTTAATTTCTACATGCTGTAATTATCATTGTTCTATCTGACCATGAAGGAGATCTAGAA ATCAATTGGTTAAAATATGTTTCTGACTGTATATGACACTTATAACTGGTTCTCATACAAAAAGAGTTTTCAATGTAGTG CCTATATGTACAACCCCCATCTTTGGTATTGTCCCAGCCGTCTATGGCTGTTATACCACTACGAGATTGGCATTGAACTA CCAAGAAATACAGGGACCAAATTGAAAATGATTGTTACATGTAAGGACCAAGATATTTCTAGTCCCAACACCTGATACTG ATCTTCAATTTTCTCCCTTTGCACTCTTCTAGGATGGTATATAATTTCTCAATATGGAAATATGGATCGTGTTTAAAACA GTTTTTCTTACAATTTGGATTAGGCCTAACTCTACCTCAAAAGCTAGTTTAGGAGTGAGGATTGTTCTACCCTTTATAAG AACTAGCCATATCTCTAGTCAATGTGAGACTTTTCATCACGCCTCTCACACCCAAGGCTAGACATGGAATGAACATTTGC GGTGGCCCATATATGAGAGGTCTCCAATAAGTTGATGTAGGATAGACACTGATATCATCTTAAAATTTGGGTTAGATATG ACTCTATCCCAAAAGCTAGCTTAGGAGTGAGGTTTGCTCTACCTTTATAAGGATTATTTTGATCATATCTCTAGTCAATG TGAGACTTCTAAACAATTTTACATGCCATAAAGATTTGACAAAGTTTTTTACTTTGACTTTATCTTTTCTGAGTTTGGTA CTGGCTATGTTTAATTCCTAAAAACTTAGTTATAATTATGCATATAGGACTAAATTGAAAACTTTTTCACACAAGGACCA AATTAAGAATTAGTGTCATGAAAAAGGACTCAAAGTACATCACCAAATGAGTTTAAGCATTCTACATGGAGTGGATTCTT TTTTCCCAATCAAATTAGTCAACATTTGATAATCCAATATTAAGATTCGTCTTTCGTATACTTTCCAGGTTCTTGAATAT GGTTCACCAGAGGAGCTCTTAAAAAATGAAGAAAGTGCATTCAATAAGATGGTTCAAAGCACTGGACCTGCAAATGCTGA GTATTTATGTAGCCTAGTGTTTGGAAGGACAAAGAACAATTCTGGTGAATATAACAAGGGGCAAGAAAGCCACACGAGAC AGTTAGCTTTTACCCATTGGGCTGCTGCTACCAAGTTTGCCATAGCTTCTACCCTTTCTTCTGTACACAATAACCTTCAA AAGCCTAGTTCTAAGGAGAATAAAGATTTCCTTGATGAAACAAAGGATGCAGTGACAACACTTCAGGAAGTTCTAGAGGG GAAGCATGATGAAGCCATAGAAGAGACACTGACTAAATTCCATGTTCCAACATATAGATGGTGGTCCACCCTCCATCAAG TTATTGAAGGTAAACATACATAA
CDS sequence (LotjaGi3g1v0103200.9) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTAGATAAAATCCTGAGCGCTCCAATGATATTCTTCCAAACCAACCCTGTTGGTCGCATAATTAATAGGTTTGCAAA AGACACGGGAGATATAGATATGTATGTTTTTGCGTTGGTGAATGGGTTTCTGGGGCAAGTGTGGCAGTTAGTTTCGACAT TTGTTCTTATCGGCACAGTGAGCACCATATCCCTGTGGGCCATAATGCCACTACTTACCATCTTTTATGCAGCTTATATT TATTACCAGAGCACAGCTCGAGAGGTGAAGCGCTTGGATTCCATTACAAGATCTCCTGTTTATGCGCATTTTGGGGAATC ATTGAATGGTTTGTCAAGCATTCGCGCTTACAAAGCATATGATAGGATGGCACAGATCAATGGAAAATTCATGGATAACA ACATAAGATTCACTCTTGTCAACATTAGTTCGAACCGGTGGTTGACCATAAGGTTAGAATCATTAGGAGGCCTCATGATT TGGTTGATAGCAACATTCGCTGTCCTGCAAAATGGAAGAGCTGAAAACAAGGCAATGATTGCGTCTTCAATGGGCCTACT TCTCAGTTACACTTTGAACATAACAAATCTCTTGAGCGGTGCCCTCAGACAAGCAAGCAGAGCTGAGAACAGTCTAAATG CGGTTGAGCGCGTTGACACCTATATAAATTTAGAATCCGAGGCTCCAGGTATAGTTGAGGAAAACCGTCCACCACCAGGA TGGCCGACAACTGGATCGATTGAGTTTGAGAATGTTGTTCTCACATACAGGCCTGAACTTCCTCCAGTTCTGCATGGAGT GTCTTTCACAGTATGTCCAACTGAGAAGATAGGGGTAGTTGGAAGAACTGGTGCAGGAAAGTCTAGCATGCTTAATGCGT TATTCCGGATTGTGGAACTACAAAGAGGAAGAATCACTATTGATGGTTGTGATGTTTCGACAATTGGACTAGCAGATCTG CGAAAAGTTCTCACCATCATACCGCAATCGCCAGTTCTGTTCTCTGGAACTGTTCGCTTCAATCTTGATCCATTTAATGA ACACAATGATGCTGACCTATGGGAATCTTTAGAAAGGGCGCATTTGAAGGATGTAATTAGAAGAAATCCACTTGGCCTAG ATGCTCAGGTTTCAGAGGGAGGAGACAATTTCAGTGTTGGACAGAGGCAACTCATAAGTCTAGCAAGAGCATTGCTACGA AGATCAAAGGTTCTTGTCCTGGATGAAGCTACTGCTGCTGTAGATGTTAGAACAGATGCCCTTATCCAGAAAACTATCCG ACAAGAATTCCAGTCTTGCACCATGCTCATCATTGCACACAGATTAAATACAATTATTGACTGCGATCGGATTCTGTTGC TTGATGCTGGCCGGGTTCTTGAATATGGTTCACCAGAGGAGCTCTTAAAAAATGAAGAAAGTGCATTCAATAAGATGGTT CAAAGCACTGGACCTGCAAATGCTGAGTATTTATGTAGCCTAGTGTTTGGAAGGACAAAGAACAATTCTGGTGAATATAA CAAGGGGCAAGAAAGCCACACGAGACAGTTAGCTTTTACCCATTGGGCTGCTGCTACCAAGTTTGCCATAGCTTCTACCC TTTCTTCTGTACACAATAACCTTCAAAAGCCTAGTTCTAAGGAGAATAAAGATTTCCTTGATGAAACAAAGGATGCAGTG ACAACACTTCAGGAAGTTCTAGAGGGGAAGCATGATGAAGCCATAGAAGAGACACTGACTAAATTCCATGTTCCAACATA TAGATGGTGGTCCACCCTCCATCAAGTTATTGAAGGTAAACATACATAA
Protein sequence (LotjaGi3g1v0103200.9) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLDKILSAPMIFFQTNPVGRIINRFAKDTGDIDMYVFALVNGFLGQVWQLVSTFVLIGTVSTISLWAIMPLLTIFYAAYI YYQSTAREVKRLDSITRSPVYAHFGESLNGLSSIRAYKAYDRMAQINGKFMDNNIRFTLVNISSNRWLTIRLESLGGLMI WLIATFAVLQNGRAENKAMIASSMGLLLSYTLNITNLLSGALRQASRAENSLNAVERVDTYINLESEAPGIVEENRPPPG WPTTGSIEFENVVLTYRPELPPVLHGVSFTVCPTEKIGVVGRTGAGKSSMLNALFRIVELQRGRITIDGCDVSTIGLADL RKVLTIIPQSPVLFSGTVRFNLDPFNEHNDADLWESLERAHLKDVIRRNPLGLDAQVSEGGDNFSVGQRQLISLARALLR RSKVLVLDEATAAVDVRTDALIQKTIRQEFQSCTMLIIAHRLNTIIDCDRILLLDAGRVLEYGSPEELLKNEESAFNKMV QSTGPANAEYLCSLVFGRTKNNSGEYNKGQESHTRQLAFTHWAAATKFAIASTLSSVHNNLQKPSSKENKDFLDETKDAV TTLQEVLEGKHDEAIEETLTKFHVPTYRWWSTLHQVIEGKHT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 229 | 229 | 4.2E-27 | ||
| SUPERFAMILY | 1 | 227 | 227 | 7.72E-38 | ||
| Pfam | 1 | 174 | 174 | 1.7E-22 | ||
| PANTHER | 1 | 520 | 520 | 2.6E-270 | – | |
| PANTHER | 1 | 520 | 520 | 2.6E-270 | – | |
| ProSiteProfiles | 1 | 210 | 210 | 26.009 | ||
| Phobius | 1 | 33 | 33 | - | – | |
| CDD | 1 | 222 | 222 | 8.54236E-76 | – | |
| Phobius | 34 | 57 | 24 | - | – | |
| TMHMM | 34 | 56 | 23 | - | – | |
| Phobius | 58 | 62 | 5 | - | – | |
| TMHMM | 60 | 82 | 23 | - | – | |
| Phobius | 63 | 82 | 20 | - | – | |
| Phobius | 83 | 154 | 72 | - | – | |
| TMHMM | 147 | 169 | 23 | - | – | |
| Phobius | 155 | 172 | 18 | - | – | |
| Phobius | 173 | 177 | 5 | - | – | |
| Phobius | 178 | 198 | 21 | - | – | |
| Phobius | 199 | 602 | 404 | - | – | |
| Gene3D | 231 | 483 | 253 | 1.3E-90 | – | |
| SUPERFAMILY | 237 | 479 | 243 | 3.83E-75 | ||
| CDD | 245 | 465 | 221 | 2.20489E-137 | – | |
| ProSiteProfiles | 247 | 481 | 235 | 18.441 | ||
| Pfam | 264 | 412 | 149 | 7.5E-28 | ||
| SMART | 273 | 466 | 194 | 1.2E-11 | ||
| ProSitePatterns | 384 | 398 | 15 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | ATPase activity | Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction. | ||
| Molecular function | ATPase activity, coupled to transmembrane movement of substances | Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the active transport of a substance across a membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi3g1v0103200.9, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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