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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0128400 |
| Transcript ID | LotjaGi3g1v0128400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ATP-dependent zinc metalloprotease FtsH; TAIR: AT4G25835.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein; Swiss-Prot: sp|Q8RY66|AATPD_ARATH AAA-ATPase At4g25835; TrEMBL-Plants: tr|A0A072VJ57|A0A072VJ57_MEDTR Chaperone BCS1-A-like protein, putative; Found in the gene: LotjaGi3g1v0128400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:15789648..15794098) extracted from Lotus japonicus Gifu genome v1.2.
ATTTTATTCAAAAGTACATATATATTGGGAATGAGAAAAATTCTTAGTGAGTTACCTACTGCTAAGGAGTCATACTTAAC TGAACATCAAATGTTTGATGCATTTTCTCAATGAATCGATCTTAAAGACACCAATATGCATTAATGGAATATGATCCTTT TGATAATTGACATTCCAAGGAGAAGCCACTTTTGGCTTTATTCTGATACCCCAATACCCAAGCTTTCTCTCAAGGCTGAC CTACACATGATATAATCAACTAAAGCTTACACACTTATATAGGAAAGTGCAATTTCTCATGAAATGCTGAGGATCTCAAC CATTGAAATTAAAATCTAGTTAATGCTGAATGTTTTCGAACTTAAGTAAATCTAGTTAATCAACTAATGTTTTTGATAAT TAAATGTGTTTTTTGAACTATTCATAGTCATTGCACTAAACATGCTTTTGGGAAGCTTGAACGGAAATACAACCACAATT AGACTATGAATTGTACACCTCAACTATGGCTTGATTTAGAACTTCTGCTACGGATAATTAACACTGCTCTGCTTAATTAT TAAGATCAATTCTCTTTATGAATCGATCTTGCAATGAACCCGCATGCATAGATGGAATATGATCCATTTTATCATTGACA TTCTACGGGGAACCCTTTCCTTATCTTTAATTTTTGATACCCCCATTTAAGCATAGCTTTCTCTCAAGGCTGACCTACAC TGATTTTTTTGCCCATCCTCCATATTCGTGGCTTTTAATGCCACACACATGTCTCTTTTTCTTTTCCTCATCCTCCTTTT ATTTTCTCTTTCCATGTTCCCTTTCTCAAAATTTCAACCATTTTATGGGCGGATACCTAAATTCATTGAAGGGGTAACAA AGATAAGATAGGAACAATAGCCCAACACCGCAGGATTGTAATCTGAAGGTGCAAATTGCATTGCTTTAGGTAAAGGAGAT TTACACAAATTTCTTTAAAGATGCATAAATTAAACTTTGTTTCAAAAGCACTAGCATGTAAAGATCTAAAAGAACCACCA TCTGCATTACTTTAAGATCTCAATCTCATAGACCATCACACCACCATGCATACTAATATGTAAAAGTCTAAAATAATGTG AAATCAAAAGTTCAAAGCATACAAATGCCTAACCAACAGCAACTCAGTATAATAGGCAATTTTAGTTACCATCTATTATT GCATACATTGTACATTGACATCTATCCTAATCAATTGCAATGGCTTAGGTACCCTTGGTTCAAAGATGAAAACAAGAAAA ACATGAAGAGATATAATGAATACAAACTTATCCAATGTGGGTTCAATTGGAACCGACATGGTGCAGTAAAATATGAAAAT GATCATCATCCCCTCATTATCAGCTTCCACTTGTCACACATGATGTGTGATTGTTGAGTTGAGTCATGATAATTCATAAG AACATTCTCTGACTGAAGGCACAAATTACAAGAGCTATTAAGGTAAAGGATAAAGTGTGATTTGTCAAGAAAGAAACAAA AGCAGTTTGTACTCAACAAGATACTACCATACATGCTATACCCTTACTTCCATGTGTTTGCATGCGCGCAGCTATGTATT GATGCTATAATCTCTTGATGTCTTTTTACAAAATGCCAGTGCGTGGGCATTGTGCAATTAGAGGCATTAGTTACAACTTG CAAGACCAAGATGCTAGTAAAATTTGATTAAATTTGATACATATCAGTGAAGTTCAATACAATTAACAAGTGAATACCCT ATACAAGATGCAGAAAATAGTCAATGAAAAAGAAAAAAAGTAAATTAACAATCGCATAGTTGAAACTGAACCTTTGCAAA AACATGCATTTTTTTGTGATTTAGGCTTTTGAGCTCATAAAAATGAAATGCACACTTCAAGTGATTGATTCCAAAGTAAT AAAACAGGCCAACAAAATGAAAGAAAGAACCTTTGGCCAAACAAAAATTCTGCATTTTCTGAGATTCTGTTAAGCATTAT GAGTAGCCCATGCATCAGAGACGAGTCTATAATCACATGAACAAAATAAATCAACCACAATCTTCTACAAACGAACAAAG CAAAAGCAAAAAAAGAAAGCAAAGTGGTCGGCTCAATCATCTTTACCTTTAACTTTTGCCTCCTCTGCTATATGCTTCAA TGCTTCTTTTTCATCCCTAACCCAAAACATTAACCTTTACCACACTATGTTCCTTCTTTTATGCAATGTATAAATCACAA CCCAAAAAAGAAACCATTTTCATCACTCTCACACTCCATTTTCCACTTCCAAGTTCCACCCAAAGTTCTCAACCTCACTC ATTCACCAACTCACAAATATGGAGATATTGTCACAAATGTGGTCATTGTTAGGGTTACTCACAGTGCTCCAAAATGTGCT CCCATCACAGCTTCTCTCAGTGCTTCATTCTCTGTATGAATCCCTACAAGACTTGCTCTCTCCATACTCCTACTTCGAGA TTCCGGAGTTCAACGGCTACTGCGGCGTCGAGCTCAACGACCTCTACCGCCACGTCCACCTCTACCTCAACGCCGTGAAC CACTCCCCTGCCGCCACATGCCGCCGACTAACCCTCTCCCGCTCCCCATCATCAAAACGCATCTCATTCGCCGTCGCGCC AAACCACACCGTCAACGACACCTTCGGCGGCCATCGCCTGTCCTGGACCCACCAAGTCGACACCGTGCAGGACTCCCTCG AGGAGCGACGGAGCTTCACCCTAAGATTCCCGAAGCGCCACCGCCACGCTCTCCTCTCCCCTTACCTCACCCACGTCACT GCCCGCGCCGAGGAGTTCGAGCGCGTCTCGCGCGAGCGCAGGCTCTTCACCAACAACAATGGTTCCGGCTCGTTCGAATC CGGTTGGGTCTCCGTCCCGTTCCGCCACCCCTCCACATTCGAAACCCTAGCTCTGGAACCAGATCTGAAAAAACGAATCA AAACCGACCTCACCAATTTCTCCACCGGCAGGGAATTCTACCACCGCGTCGGCCGAGCTTGGAAGCGCGGCTACCTCCTC CACGGCCCTCCCGGTTCGGGTAAATCAAGCCTCATCGCCGCCATGGCGAATTTCCTCTGCTACGACGTCTACGACCTAGA ACTCACAAAAGTCACCGACAACTCCGAGCTCCGATCACTCCTGATCCAAACAACGAGCCGTTCGATCATCGTGATCGAAG ACATCGATTGCTCCGTCGATCTAACCGCAGATCGATCCCTAAAGAAAACTACAGGATCAAAATCGTCGTCGAGAACGAGA AAGGAGAGCAACAAAACGGCGTCGTGCGGCGATGAAACGGGTCGGGTCACGCTTTCGGGGCTGTTAAACTTCACCGACGG GTTATGGTCATGCTGCGGGGAGGAGAGGCTGGTGGTGTTCACGACGAACCACCGGGAGAGCATCGACCCGGCGCTGGTCC GGTGCGGGCGGATGGACGTGCACGTGAGCCTCGGCACGTGCGGGGTTCACGCGTTCCGGGAGCTAGCAAGGAACTACCTA GGGGTGGAGTCGCACGTGATGTTCGAGGCGGTGGAGGGGTGTATCCGCTCCGGTGGGTCGCTCACGCCGGCGCATGTGGG GGAGATTCTGTTGAGGAATCGGGGAGATGCTGATGTGGCGTTGAGGGAGGTGGTGGCGGCGATGCAGGGGAGGGTGGTTG GTGGTGGCGGCGACAGTGGTGATCAGACGACGACAGATAGTGAGGATGTGGCGGTGGTTGGGGTGAGGTCGCCGGAGAGT GTGTTGATGATGGGGTCGCCGGAGAATTGGGATTCGTTGGGCGGGAAGAGGAGGAAGGAGCAGCATCATGCGTCGAGTCA TTTGGAGAAAAAAGTCAAATTCTTTGTGAGGTTGAGGTCGTTGACCAAATCTGACTCGGGTAGAAGATGAAAATGTTTTG TGAATTAGTGAGGTTTTTGTAAAGGTGATTAGTCTATGAGTCGGGATCCTCTGAAGTGTTAAAAAATTTGAGAGTGTGAA GTTTTAACATTTCATCATTAACTTTTGTCTAGATAATAAATGAAAAATAAAATAAAATTAATGGTGAGATGATGAAACTT AACACTCTCAAGTTTTTTTACACATGAGAGGATCCAAACCCTTACTATATGACTTCTCTGATTAAATTTTACCTTTCTGT TTAGGAATTCAGATAGACTTACATTATGTTATGCCTCTATTCGAATCTATTACATTTATGGTCTTTTTTTTTTTTAATTC ATGGTCACAACTTAGCATTTTAACTTTATGAGATTATATTTTAAGATTTGGCTAGTCTAAAATTATTTCTAAGAGGCCCA AAGTCCTACGCGAGATAGAGTGGAGAATTTTTAGCAATAGGCGAAAGTCTGATGGAGTAATGTCGTGTGAAGATAGAAGG TTTACATGTCGTTCACTTTTTTTCCAAGATTAGATGAGATTTTAAAAAATT
CDS sequence (LotjaGi3g1v0128400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGATATTGTCACAAATGTGGTCATTGTTAGGGTTACTCACAGTGCTCCAAAATGTGCTCCCATCACAGCTTCTCTC AGTGCTTCATTCTCTGTATGAATCCCTACAAGACTTGCTCTCTCCATACTCCTACTTCGAGATTCCGGAGTTCAACGGCT ACTGCGGCGTCGAGCTCAACGACCTCTACCGCCACGTCCACCTCTACCTCAACGCCGTGAACCACTCCCCTGCCGCCACA TGCCGCCGACTAACCCTCTCCCGCTCCCCATCATCAAAACGCATCTCATTCGCCGTCGCGCCAAACCACACCGTCAACGA CACCTTCGGCGGCCATCGCCTGTCCTGGACCCACCAAGTCGACACCGTGCAGGACTCCCTCGAGGAGCGACGGAGCTTCA CCCTAAGATTCCCGAAGCGCCACCGCCACGCTCTCCTCTCCCCTTACCTCACCCACGTCACTGCCCGCGCCGAGGAGTTC GAGCGCGTCTCGCGCGAGCGCAGGCTCTTCACCAACAACAATGGTTCCGGCTCGTTCGAATCCGGTTGGGTCTCCGTCCC GTTCCGCCACCCCTCCACATTCGAAACCCTAGCTCTGGAACCAGATCTGAAAAAACGAATCAAAACCGACCTCACCAATT TCTCCACCGGCAGGGAATTCTACCACCGCGTCGGCCGAGCTTGGAAGCGCGGCTACCTCCTCCACGGCCCTCCCGGTTCG GGTAAATCAAGCCTCATCGCCGCCATGGCGAATTTCCTCTGCTACGACGTCTACGACCTAGAACTCACAAAAGTCACCGA CAACTCCGAGCTCCGATCACTCCTGATCCAAACAACGAGCCGTTCGATCATCGTGATCGAAGACATCGATTGCTCCGTCG ATCTAACCGCAGATCGATCCCTAAAGAAAACTACAGGATCAAAATCGTCGTCGAGAACGAGAAAGGAGAGCAACAAAACG GCGTCGTGCGGCGATGAAACGGGTCGGGTCACGCTTTCGGGGCTGTTAAACTTCACCGACGGGTTATGGTCATGCTGCGG GGAGGAGAGGCTGGTGGTGTTCACGACGAACCACCGGGAGAGCATCGACCCGGCGCTGGTCCGGTGCGGGCGGATGGACG TGCACGTGAGCCTCGGCACGTGCGGGGTTCACGCGTTCCGGGAGCTAGCAAGGAACTACCTAGGGGTGGAGTCGCACGTG ATGTTCGAGGCGGTGGAGGGGTGTATCCGCTCCGGTGGGTCGCTCACGCCGGCGCATGTGGGGGAGATTCTGTTGAGGAA TCGGGGAGATGCTGATGTGGCGTTGAGGGAGGTGGTGGCGGCGATGCAGGGGAGGGTGGTTGGTGGTGGCGGCGACAGTG GTGATCAGACGACGACAGATAGTGAGGATGTGGCGGTGGTTGGGGTGAGGTCGCCGGAGAGTGTGTTGATGATGGGGTCG CCGGAGAATTGGGATTCGTTGGGCGGGAAGAGGAGGAAGGAGCAGCATCATGCGTCGAGTCATTTGGAGAAAAAAGTCAA ATTCTTTGTGAGGTTGAGGTCGTTGACCAAATCTGACTCGGGTAGAAGATGA
Protein sequence (LotjaGi3g1v0128400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEILSQMWSLLGLLTVLQNVLPSQLLSVLHSLYESLQDLLSPYSYFEIPEFNGYCGVELNDLYRHVHLYLNAVNHSPAAT CRRLTLSRSPSSKRISFAVAPNHTVNDTFGGHRLSWTHQVDTVQDSLEERRSFTLRFPKRHRHALLSPYLTHVTARAEEF ERVSRERRLFTNNNGSGSFESGWVSVPFRHPSTFETLALEPDLKKRIKTDLTNFSTGREFYHRVGRAWKRGYLLHGPPGS GKSSLIAAMANFLCYDVYDLELTKVTDNSELRSLLIQTTSRSIIVIEDIDCSVDLTADRSLKKTTGSKSSSRTRKESNKT ASCGDETGRVTLSGLLNFTDGLWSCCGEERLVVFTTNHRESIDPALVRCGRMDVHVSLGTCGVHAFRELARNYLGVESHV MFEAVEGCIRSGGSLTPAHVGEILLRNRGDADVALREVVAAMQGRVVGGGGDSGDQTTTDSEDVAVVGVRSPESVLMMGS PENWDSLGGKRRKEQHHASSHLEKKVKFFVRLRSLTKSDSGRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 9 | 9 | - | – | |
| PANTHER | 1 | 493 | 493 | 7.8E-254 | – | |
| PANTHER | 1 | 493 | 493 | 7.8E-254 | – | |
| SignalP_EUK | 1 | 22 | 22 | - | – | |
| Phobius | 1 | 22 | 22 | - | – | |
| Phobius | 10 | 17 | 8 | - | – | |
| Phobius | 18 | 22 | 5 | - | – | |
| Pfam | 21 | 119 | 99 | 2.2E-20 | ||
| Phobius | 23 | 523 | 501 | - | – | |
| SUPERFAMILY | 140 | 403 | 264 | 8.83E-41 | ||
| Gene3D | 184 | 380 | 197 | 2.6E-39 | – | |
| SMART | 228 | 380 | 153 | 6.1E-5 | ||
| CDD | 229 | 290 | 62 | 2.06177E-6 | – | |
| Pfam | 233 | 378 | 146 | 1.5E-11 | ||
| MobiDBLite | 302 | 323 | 22 | - | – | |
| ProSitePatterns | 350 | 368 | 19 | - | ||
| MobiDBLite | 478 | 501 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. |
Expression pattern of LotjaGi3g1v0128400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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