Domain Predictions — View

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cd03702

Source: CDD

Description

IF2_mtIF2_II

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 9

Transcript	Name	Description	Predicted domains	Domain count
Lj1g3v4808860.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: translation initiation factor IF-2-like isoform X1 [Cicer arietinum] gi\|502154667\|ref\|XP_004509778.1\|	Domains G3DSA:2.40.30.10 G3DSA:3.40.50.10050 G3DSA:3.40.50.300 IPR000178 IPR000795 IPR005225 IPR009000 IPR023115 IPR027417 MF_00100_B NON_CYTOPLASMIC_DOMAIN PF00009 PF11987 PS51722 PTHR23115 PTHR23115:SF184 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF50447 SSF52156 SSF52540 TIGR00231 TIGR00487 cd01887 cd03692 cd03702	28
Lj3g3v0988820.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: translation initiation factor IF-2, chloroplastic-like [Glycine max] gi\|356525823\|ref\|XP_003531521.1\|	Domains Coil G3DSA:2.40.30.10 G3DSA:3.40.50.10050 G3DSA:3.40.50.300 IPR000178 IPR000795 IPR005225 IPR009000 IPR023115 IPR027417 MF_00100_B PF00009 PF11987 PR00315 PS01176 PS51722 PTHR23115 PTHR23115:SF138 SSF50447 SSF52156 SSF52540 TIGR00231 TIGR00487 cd01887 cd03692 cd03702 mobidb-lite	27
LotjaGi1g1v0752600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Translation initiation factor IF-2; TAIR: AT4G11160.1 Translation initiation factor 2, small GTP-binding protein; Swiss-Prot: sp\|B8EIA7\|IF2_METSB Translation initiation factor IF-2; TrEMBL-Plants: tr\|V7D180\|V7D180_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0752600	Domains G3DSA:2.40.30.10 G3DSA:3.40.50.10050 G3DSA:3.40.50.300 IPR000178 IPR000795 IPR005225 IPR009000 IPR015760 IPR023115 IPR027417 IPR036925 MF_00100_B NON_CYTOPLASMIC_DOMAIN PF00009 PF11987 PS51722 PTHR43381 PTHR43381:SF13 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF50447 SSF52156 SSF52540 TIGR00231 TIGR00487 cd01887 cd03692 cd03702	30
LotjaGi1g1v0752600.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Translation initiation factor IF-2; TAIR: AT4G11160.1 Translation initiation factor 2, small GTP-binding protein; Swiss-Prot: sp\|Q5FQM3\|IF2_GLUOX Translation initiation factor IF-2; TrEMBL-Plants: tr\|I1NBL5\|I1NBL5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0752600	Domains G3DSA:2.40.30.10 G3DSA:3.40.50.10050 G3DSA:3.40.50.300 IPR000178 IPR000795 IPR005225 IPR009000 IPR015760 IPR023115 IPR027417 IPR036925 MF_00100_B PF00009 PF11987 PS51722 PTHR43381 PTHR43381:SF13 SSF50447 SSF52156 SSF52540 TIGR00231 TIGR00487 cd01887 cd03692 cd03702	25
LotjaGi1g1v0752600.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Translation initiation factor IF-2; TAIR: AT4G11160.1 Translation initiation factor 2, small GTP-binding protein; Swiss-Prot: sp\|Q5FQM3\|IF2_GLUOX Translation initiation factor IF-2; TrEMBL-Plants: tr\|I1NBL5\|I1NBL5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0752600	Domains G3DSA:2.40.30.10 G3DSA:3.40.50.10050 G3DSA:3.40.50.300 IPR000178 IPR000795 IPR005225 IPR009000 IPR015760 IPR023115 IPR027417 IPR036925 MF_00100_B PF00009 PF11987 PS51722 PTHR43381 PTHR43381:SF13 SSF50447 SSF52156 SSF52540 TIGR00231 TIGR00487 cd01887 cd03692 cd03702	25
LotjaGi1g1v0752600.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Translation initiation factor IF-2; TAIR: AT4G11160.1 Translation initiation factor 2, small GTP-binding protein; Swiss-Prot: sp\|Q5FQM3\|IF2_GLUOX Translation initiation factor IF-2; TrEMBL-Plants: tr\|I1NBL5\|I1NBL5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0752600	Domains G3DSA:2.40.30.10 G3DSA:3.40.50.10050 G3DSA:3.40.50.300 IPR000178 IPR000795 IPR005225 IPR009000 IPR015760 IPR023115 IPR027417 IPR036925 MF_00100_B PF00009 PF11987 PS51722 PTHR43381 PTHR43381:SF13 SSF50447 SSF52156 SSF52540 TIGR00231 TIGR00487 cd01887 cd03692 cd03702	25
LotjaGi1g1v0752600.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Translation initiation factor IF-2; TAIR: AT4G11160.1 Translation initiation factor 2, small GTP-binding protein; Swiss-Prot: sp\|Q5FQM3\|IF2_GLUOX Translation initiation factor IF-2; TrEMBL-Plants: tr\|I1NBL5\|I1NBL5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0752600	Domains G3DSA:2.40.30.10 G3DSA:3.40.50.10050 G3DSA:3.40.50.300 IPR000178 IPR000795 IPR005225 IPR009000 IPR015760 IPR023115 IPR027417 IPR036925 MF_00100_B PF00009 PF11987 PS51722 PTHR43381 PTHR43381:SF13 SSF50447 SSF52156 SSF52540 TIGR00231 TIGR00487 cd01887 cd03692 cd03702	25
LotjaGi3g1v0142900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Translation initiation factor IF-2; TAIR: AT1G17220.1 Translation initiation factor 2, small GTP-binding protein; Swiss-Prot: sp\|P57997\|IF2C_PHAVU Translation initiation factor IF-2, chloroplastic; TrEMBL-Plants: tr\|V7BXF4\|V7BXF4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0142900	Domains Coil G3DSA:2.40.30.10 G3DSA:3.40.50.10050 G3DSA:3.40.50.300 IPR000178 IPR000795 IPR005225 IPR009000 IPR015760 IPR023115 IPR027417 IPR036925 MF_00100_B PF00009 PF11987 PR00315 PS01176 PS51722 PTHR43381 PTHR43381:SF5 SSF50447 SSF52156 SSF52540 TIGR00231 TIGR00487 cd01887 cd03692 cd03702 mobidb-lite	29
LotjaGi3g1v0142900.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Translation initiation factor IF-2; TAIR: AT1G17220.1 Translation initiation factor 2, small GTP-binding protein; Swiss-Prot: sp\|P57997\|IF2C_PHAVU Translation initiation factor IF-2, chloroplastic; TrEMBL-Plants: tr\|V7BXF4\|V7BXF4_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0142900	Domains Coil G3DSA:2.40.30.10 G3DSA:3.40.50.10050 G3DSA:3.40.50.300 IPR000178 IPR000795 IPR005225 IPR009000 IPR015760 IPR023115 IPR027417 IPR036925 MF_00100_B PF00009 PF11987 PR00315 PS01176 PS51722 PTHR43381 PTHR43381:SF5 SSF50447 SSF52156 SSF52540 TIGR00231 TIGR00487 cd01887 cd03692 cd03702 mobidb-lite	29

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
mobidb-lite	MobiDBLite	1	11.11