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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0189900 |
| Transcript ID | LotjaGi3g1v0189900.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glutamate receptor; TAIR: AT1G05200.1 glutamate receptor 3.4; Swiss-Prot: sp|Q8GXJ4|GLR34_ARATH Glutamate receptor 3.4; TrEMBL-Plants: tr|G7IU03|G7IU03_MEDTR Glutamate receptor; Found in the gene: LotjaGi3g1v0189900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:27333658..27342929) extracted from Lotus japonicus Gifu genome v1.2.
CTCTTTCCTCTTATCATCTATCACATCTCATACTTACTCTCTCTTACTTTTTCTTTTCTTCCTATCTCTCTCCTCTTCCA CCTCAAAATGAGGTGTGAAGAAAACATTTTCCTAAGTCAGCTTAGATTACTCATCAAAACAACTCTCAAATAAGCCGCAA AAATTTGAACACACAATATTATGAAGGAAATTAATTTATACTTACAAGATATATTTCCATAGCTGTTTGGATGTGTTTTT AATATTGTCAGAACCCTTTCTTCGCCAAAAAATTACTTCTTTTTATATAATAAAATCATAAATTTTCCTAACACACTTGA AAAGAGTTATTTTTTTTATAAGCACTTGAAAAGAGAGTGAATGATTCTTTGCTTTGAGTTTGCACCCGAGTTAGTTCTTT TTTTTAGTTAGTGAAAGTGAGTTGGTTCATTCTTTAGTCACATGCTCTATGTACTTGTTTAAAGTTCAGAACTTTGGCGA CTTGCAAGCTTTTATCTCTTTAAGTTTGGCTTTGAGGTAACCTCAGATTCTGCCCACTCCCTTGCTTGTTCTTGAGGTCT CTTTGCATATTAAATACTTTCTTTCCCTTTATTGGCAATATTAATTAGGCATGTGGGTCTTAGCTTCCCCAACACACCCA ATTATTTATGAAGTTTCAGCATTTGTTTTCTCTTAAGAATTTCTGACCTTGATAGGCTTATGAATGACTCATGATAATAA CCTGTAACCACCTATCTAATTAATACTAAAATTGAAAAGTCTGGATATGCTCATATCATTTTCTTTTTCCATGTGGGGGA TGTGAGTATCTGAATTTTAAAAATCCAAATTCTTGATGCCAAGTTTCTGGTTGGATGCTTGAATCTAGTTTTATGGGCTG CAAGTGTTTCTGTTTTCTACACAAATGACGTTTCTTGCTTTCTTTTCTTTGTGTCTTTGTGCTGCTGCTTAAATGAGTTG CACTTGACAGGTGCTGAAATCTGATGGAGGTAGGTCTAAACTGGAGAACTTGGAAATCCTTCTACAACTGATTCTACAGG TAAAATCAATTTTGGGAAGAAGCTTATGTGGATAGGATAGCGTCCTAGTGTCAAAATTGATTCTGATGAAAAATAATTTG TCCAAACATATTATTAAACTACTAGCTGCAAGCTTTTCTCAGAAATGGAGGTGCTCTGGGTCAAGGTGTTGTTCTTCATG GTTTTCTGCTTGTGGATTCCCATGGATGTGATGGGAATGACAGGAACTAGTGCTGTAAACTCTAGTGTTTCTTCCAACCC AAGTGTTTTGAGGATTGGAGCCTTGTTCACTCTTGATTCTGTCATTGGAAGGTCTGCTAAACCTGGAATCTTGGCTGCAA TTGAAGATGTTAATGCTGATAAAATCATTCTTCCTGGCATTAAGCTGGAGGTCCTTTTACATGATACAAATTGCAGTGGG TTTCTTGGAACAGTGGAAGGTATTTACCAAAACTTGAATTTCAGTGCTACAAGCTGCTGTTTGGATTGGTCAATCTAAGG TCTTTTTTTAGAGGAATATACTTATAATTTTTAAGAATTGGTTTGTGTCTTATTTATCAAACATAAGATAAATTGTTTCT TAGCTTTCTTAGTCTTCCTTTTACTCCATGGCCTCTTTAGGTGATACGGATGTAGAGCTCGTTTGGATACGGACTAAAGA ACACTTATTAAAACTTATTTACTAAAAAATGCACTAGATAAGCGTCGATAAATGCTCTTTGGTCCGCATTCAAACATGCT CATAAATTTCCGGTCATCTTAGGACATTCTATGTGTAATCATGTCCAATTTTGCAAAAAAAAAAAAAGACTTTCATTGTA AGAGTATTCTTTCCTCTTAAGTCTACCTGTGAATTTCATTGCATGTAAAATGTCTGGTGTTCCAAATTTTGTTGCTGTAA AACTGCAATAGGTTCGGTTCCAAAATAAAGCAAGGTAAGTATACCCGTTAGCTTATTCGTCTCAACCACTTTAGTGAATA GGAAATCATTTAGTAAACAGAAGCCTGAAATTTGAATTGGTTCCCTTTTCATTCAAATTGTCTTAGTATGTCATTGCATA TATGTTCTTGGAACAAAATTTAGAGAAAAATTTCTGTGGACTCTTATTGTCCTTTCTCTGCATGTATGTGTGTGTTTGAA CTAGAAGTGAACAAACTTCATTAATTTTTCTTGATGATGTAGCTTTGCAGTTAATGGAGCATGAAGTAGTTGCTGTAATT GGTCCACAGTCCTCTGGAATAGCCCATATCATCTCTCACGTTGCTAATGAACTCCATGTACCTCTTCTTTCATTTGGGGC AACAGATCCCTCTCTATCTTCTCTGCAGTACCCGTATTTTATCCGCACCACCCACAGTGACTATTTTCAGATGTATGCAG TTGCAGACTTGGTTGATCACTATAGATGGAGGGAGGTGATTGCCATTTTTGTAGATGATGATAATGGAAGGAACGGGATT TCAGCACTCGGAGATGCTCTCGCGAAGAAGCGCGGCAAGATCTCTTACAAGGCTGCCTTGCCTCCTGGAGCCTCCAAGAG TTATATCAGTGACTTGTTAAATGGAGTGAACTTAATGGAATCCCGGGTCTATGTTCTCCATGTTAATCCTGATTCTGGTT TGCAAATTTTTTCTATTGCCAAGAAGCTTGGAATGATAACCAGTGGCTATGTGTGGATTGCAACAGATTGGCTTCCTTCA GTGCTGGATTCAATGGAGCAAGTTGACACTGGCACATTAAATCTCCTTCAAGGGGTTGTAGCTTTGCGCCACCACACTCC TGATAGTGATCTCAAAAACAAATTTTTCTCCAGGTTGAAGAACCTAAAAGGCATGCAGAAGTCAAGCTTCAACTCTTATG CATTGTATGCATATGATTCTGTTTGGTTAGCAGCCCGTGCTCTAGATGTTTTTACCAAAGAAGGGGGAAACATATCTTTC TCTTTTGATCCTAAGTTGCAAGACAATAATGGAAGCATGTTGCATTTATCATCGCTTCGCATTTTTGAAGGAGGTCCATT GTTTTTTCCCACAATCTTGGGAATGAACTTCACTGGTTTGAGTGGTCCAATTCAGTTTGATGGGGAAAGGAATCTGATTC ATCCTGCATATGATGTCCTGAACATTGGTGAATTTGGATCCCGGAGAATTGGTTATTGGTCTAATTACTCTGGTCTATCA GTCATAGCACCGGAAGTGTTATATAAGAAGCCAGCCAACACTTCAACAAGCAATGAGAAACTGGACAGTGTTCTGTGGCC TGGAGAAACTATAGCTACACCAAAAGGGTGGGTTTTCCCCAACAACGGAAAGCCGCTGCGAATAGCAGTGCCTCTTAGAG TTGGCTACTTGGAGATTGTATCTAAAGACAAGAACCCTCCTGGGGTAAAAGGCTTTTGCATTGATGTCTTTGAAGCAGCC ATAAATTTGCTGCCTTATCCTGTCCCAAGACAATATATATTATTTGGAAATGGTGATAGAAATCCCAGCTATAGTGACCT TGCCAATCAGGTTGCATCAAATGTAAGTTTCTAAGTCTAATTAGCAGCCTAATATAGTGATCACATGCCTGATAAGAAGC TTGTTTGATTGCAGACTAAAAAGTACTTATTGGAGCTTATCCAGTGCTTTTTCTAATATATAAGCTTCAATAATTGCTCT TTTGTCCGTTTCCAAACGGGATGAAGGACAGCAAGTAGTAGTAACCTTTTAGATGGTAGTATCTAAAATAGAATTTTTAG TTTCTATCAAGGGAGGTTCAATTCAAGTGTCTTCTAATTCCTGTGGTTATGTTAATTTGGTCCTTTCCTTTCATTCTTCA GAACTATGATGCAGCTGTTGGAGATATTACAATTGTCCCAAACAGGACAAGGATTTTGGATTTCACTCAACCTTTCATGG AATCAGGGCTGGTTGTTGTTGTTCCTGTCAAGGAGGTCAAATCAAGCCCTTGGTCTTTCCTTAAGCCATTCACTGCTCAA ATGTGGTGTGTTACTGGTGCCTTTTTTCTTTTTGTGGGAGCTGTTGTATGGGTTCTTGAGCACCGGCACAATCCAGAGTT CCGTGGTCCACCCAAGAAACAAATTATGACAATCTTTTGGTAAGTATTTTTGAAGTTTGAACTATATGAAAGCCTTTTAA GATGAATCCTTTGGTTACTTGATTTAACATCTAGTAACATATTTGCTGAAATTAGCTCCTCTTTTGCAGGTTTACTTTCT CAACAATGTTTTTCTCACACAGTATGTGCCTTCTCATTATCCATTTCTCATCACATATCTTCAATTTTTCACCCTTAATA GTCCTTACTTTGTATGGTACATGATAAAATTTCTGACTTATTTGCTGCTTTGACATGGTACAGGAGAAAACACTGTGAGT GGTCTTGGGCGATTCGTGCTGATCATATGGCTTTTCGTCGTGCTTATTATCAATTCAAGCTACACAGCAAGCTTAACATC CATACTCACAGTGCAGCAACTGTCTTCACAAATTGAAGGAATTGACAGCTTGATCTCAGGTACTCAGCCAATTGGAGTTC AAGATGGGTCCTTTGCTCGGAAGTACCTGATAGATGAACTCAATATACAAGAATCTAGGATAGTTTCGTTGAGAGATCAG TCGGCATATGCTGATGCCCTTATGCGTGGACCGAAAGGGGGAGGGGTTGTAGCCATTGTTGATGAGCTTCCTTATATTCA GCTCTTCATGTCCAATACCAACTGTAAGTTCAGAACCGTTGGGCAGGAGTTCACTAAAAGTGGTTGGGGATATGTAAGTA TCTTTCTTGCATGACTATGGTTTAAATTCCTAAATTCTATCCATTTACTTTGTTTTCTTTCTTTTTCTTTTTATGAGAAT TGTTCTAGAACTTTGATTGAAGATAGGTCTGCCATTTCATCTATAGCTGTTTCCTAATACAAGGATTTTTTGCTTTATTT TTGTTAAGCCATATAGTCACCTCAGCTAATCATTTAGGCTATGTATACTTTAAGACAAAAAGTGAATGAAACTCTTCAAA CAAATTGAGATGAAAGTCTGTTCATTTCTGTTCAACTTGTATCCAAACACACACTTTGCTGTTCAAATAGTACTCTTGTT AATCATTCTCTCCTTCCTCCCTGAAAGCTGAAAAGAAAGTGAAGCCAAAGCACTTTTGATGATTTGTTTTATGTCTTTTT GGATCAAACTTCCTTCTACTATTTCTCAAAAAAGTTTGTGAGTCAAAGTTCATACATAAATATTCTTTTACTTAATGAAG TTGTTCCTTTTGTGACTCTTACTATCAAGTGTGCTAATGCATTCTTACCTTCTTATATTTGATACCTCATCTCAGGCATT TCAGAGGGACTCTCCCCTTGCTGTTGATATGTCAACCGCCATTCTTCAACTCTCCGAGAATGGTGACCTGCAAAAGATCC ATGACAAATGGCTTCTAAAACATGATTGCACAGCACAACTCGATGATATCGATTCAAATAAGCTATCTCTGAGCAGCTTC TGGGGTCTCTTTCTCATATGTGGCATAGCATGTCTCCTTACTTTGATTGCATTCTTTGTTAGAGTGTTCTGTCAATACAT GAAATTTATCCCAGAGCCTGAGGTAGCTGACGAGGAAGTTCAATCAAGCAGGTCTAGACGGTTTATGAAAATCGGATCTG CTAGCTTCAAGGACTTGATTGATTTCGTGGATAAGAGAGAAAAAGAAATCAAAGAGGTACTTAGGCAGAAGAGTAACAAG AGGAGACGCAGCCAGAGCATAGATGGTCAATCAAGTTCACCTGCCTAAGTAATCAGGGACGTTTCTGTTGGTATCTTCTT TTGTTTCTTAATTTGGCTATACCTTTAGTAATAGTATTCACACAAATTTTGTCTATACTGAAATATCTTGATTTCTTCCT CCTTAGGTAGGAAATTGTGGCTGTAAGGTTGTCATAAACACAGTATGAAAAAAAGGAAACGATTATTATTATCATGATAT ACATTTAAAGCCTGTATACACTAGATTTAGACAATTGTACTTTCATGTAAAGAAGTTTTGAGTTCAAGCTTGTAAACTAT GGCTGATCTGCTCTGCTTTTAAGGAAGAGCATTATTAACAAAAAGAAAGTGACTTATCAACCCCCCCCCCCCCCCCCAAA CAACACGTTTTTGTTACTCACAAGACAGGATTGATGGAGTGTAAATGGTTCATGGATGTATGTTATGGAACAATAGAGTA GGTGATGGAATGAGAGTAGAGATGGTATGAAAGTGTGAATGTTTCAATGAGGTATTGATACCGAGTAGTAAAGAAAATTG GCAAAAATGGTATTTTCTTGGTTTTTCCTCTTTGTCATAGAGGGGAAAATGGGAGATGGTTTGGAGGAGGGGTAAGGAGG TAGGGATGGTGGAGGAGGAGGAAGGAGAGCTAACAATACCAAAAATAACAAAGAAAATTTTCACTTTGCCACATAAAAAT CAAATGTGGTAATTTCAAGCATTATTTAATCAATTTTTATCATTCAAGAACTAAAATATTGTTATGAAGAGAGAGATAGA TACAATTTTAACTTGAGAAAACTTGCAGGAGTTTACATTTGAGAGGATCCTGATCCGTTAAAGAATTTCCATGAGAGGCA TAATATAACCGGGTGCTAAAGAAGGAATTATCCTATCAATTGTCAAAGGTACTCAAAAAATGTGGTAATCAAACTTGAGT GATGATAAGGACATTCACAATATAGTACATTTAGCCATAGCCATGCAGGCTCACAAGAGAATTCTTCACATATAAAGAAA AATTATCATTGGTAATCCAAAGTTTGTCGGAAAATACATCATTTGATATATGGCTCTCATGTTTTGGTCACACATGTAAT AGGCATCAGTAGATTAATAGGATTCAAATCATCTCATTATCATACCAAGGGACAGATCTAAGATGTAATGAATTTACCAG AGATATAACGAAAACCCTCAAACTAATCCAGCCAAACATTAGTTATTGGCGTTTATAACATCCAACAAGTAATCAATAGA TTATCAGGTAGAATATTCAAGAATTCAACTGGCCATGCCTTATTGGGCAAGCAACATTGAAGTGCAGAACAAAGGCATAC AACTTCTATTTCGCGTAACAAAGTGAAATGAAGACAACTTAATTACATTACATATTATCTTTGCAAACACCATCCCGGTG GACTGAAAAGTTGAAGCCATAAAAAGACCACGGAGAGCCAAAATTGTTCTTTCCAAGGCATTTGTAAAAATGGCACTACT CAGGTTTCACAGGCTTTGGCACACTCTTCAGTGGTTCCAAATCCAAATAGGTAAAGGGCTCTGTTGGTTCCTCGCTGCAA TAGCCACAAAAGTCATAAGCAAAACAACCTAGCATACAATAAGTAGTGACTGGAAAACTTGTATGGAGTAAGCCAAAACA AGGTGTGCATGATGTACAAGTAAAAAACTATAGCAAGCAGTGGCTGATTTGGTCCTGATGATATTTATTATCTCCCTAAT GATAGCTCTCTTAAAGTTTGATGCTGCTTTAATTCATAAGACTATGTGGCATAGTTCATAAACAACGATATTCTTAAGAG GAGAGAATGGTGTGCTAGACAATAATCTCACCCAGGTTTAGAACGCATGCACTTCCAGAAGAGCTTGAAAGGTCCTGGAA CAGTCTTGAATGGGTTTCCCTCAAAGCAAGCCTACACAATTTACCACCTTTAAGACTCAAGATAATAACACCAAGTTCAC TCCAAAACAAATGCATATGGAAACATGAAAAAAATATATAGAGAAAACCTGAAATGTCCACAAACCACAAATTATGTGAC CAATTAAATCATGACCAGTCTAATCTGTTATAGTTTCCCTAGGATATGATGTTAGGACCCCATTGCAAGGTATGGGACTT GAGTCCCACATTGGAAGTATGGGATTCTAATGTGGGGTTTATAAGGCCTTGGGCTCTCCAACTACAACAGCTAGCTTTTG GGGTGTGGTTCTCCCAAGGTTCATATTCCTCTCTACAAATGTGTGCAATAACTTTCTCTAGCCCTTTCATAGGATTCACT TTCATGTTGGTTCACTTGGCTTGGTTTTTTAAATTCTATCCTTTCTTATGTTTTCTGTTCTAATATCAGTGTTGTTACTG GCGGATGGCGGAGAGCCAAAACCCCAACATATTTGACAAATAATAATGGCAAATGGCGGACTATGGCGGGATATTGGCCA TGGCAGAAAGCCGAAAACTCGCCATGAGAATCCGCCATGGCGGATATTAGATAACACTGTCTAATATATGATATTGAGCT TAATAATGTATCATGTTAGTAAATTCCACCCCTTCTCCTGACAAGAATTTTCAATTGCCACCCTGCAAACTGTTAACCTT GAGCATCAATTTCAATTTCCTCAAGCCTCTCTAAAAGCAATTAAACACCTAATATTGGCTTCTTCACAATCAGCTAAAAG AGAAATTGTCAAGAAATGAAATGAAATTGCCTGGACAGATCCTAGTGACACTCACACGAATTTCAATTACACTGCATTTC AGTATAACGTTGATTAAGAGATTAAACTCGAATGAAAACTAATGATAAGGATTCAAACCCCAATTAAAAAACATGAAAAT TTTGAGGAAAAAAAAAAAGAGTTTTTCTTCAAAATGAAAAGATGTGATTGATTTAAATAGAAAAGGGAAAACCTGAATGA CATCTTCAACACGGTCATTGCATCGGTGAGCTTTGGGTTCAGGGTGGTTTTCTCCTGTAATTCCCCATGGACTCTCTCTC CTCGGTACCGGCCTTGTCTCGCTCATCTTCCTCTTCCTCTTCTTCTGTTGCTTCTTCGCAACTCCACTGGAGAGCGGTGA ATGAATGAACCTCTACTTCACATGGGCCCTTATTTGGGGCCGAAAGGCCCATGGCTTTGGATGAGATTTTATTTTTATTT TTATGATGGATGAGATTATTGACCAAGAAAAAATATGAGATTTTAATCTTAGCTAGCGTTTGGTGACGGAACGGAATAGG AGCTGAAACAAACACAAAAAGTGATTTTTTGATTTTAAAAGTGATTTTTTGATTAAAAATTTATTTTTCTAAAATAAGTT GAATCAAACGCACTCTAATTGGCTCGTTTATCATTGCTTACAAAAACTGATTTTACTTTTGAAAAAATAATTGATTTTAT TTTAATTAAGTTGATTCGTGTTTGACTACTCTAATTAAAACCACTTTTTTTTATCTCCTCTCATCTATCATC
CDS sequence (LotjaGi3g1v0189900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGTGCTCTGGGTCAAGGTGTTGTTCTTCATGGTTTTCTGCTTGTGGATTCCCATGGATGTGATGGGAATGACAGG AACTAGTGCTGTAAACTCTAGTGTTTCTTCCAACCCAAGTGTTTTGAGGATTGGAGCCTTGTTCACTCTTGATTCTGTCA TTGGAAGGTCTGCTAAACCTGGAATCTTGGCTGCAATTGAAGATGTTAATGCTGATAAAATCATTCTTCCTGGCATTAAG CTGGAGGTCCTTTTACATGATACAAATTGCAGTGGGTTTCTTGGAACAGTGGAAGCTTTGCAGTTAATGGAGCATGAAGT AGTTGCTGTAATTGGTCCACAGTCCTCTGGAATAGCCCATATCATCTCTCACGTTGCTAATGAACTCCATGTACCTCTTC TTTCATTTGGGGCAACAGATCCCTCTCTATCTTCTCTGCAGTACCCGTATTTTATCCGCACCACCCACAGTGACTATTTT CAGATGTATGCAGTTGCAGACTTGGTTGATCACTATAGATGGAGGGAGGTGATTGCCATTTTTGTAGATGATGATAATGG AAGGAACGGGATTTCAGCACTCGGAGATGCTCTCGCGAAGAAGCGCGGCAAGATCTCTTACAAGGCTGCCTTGCCTCCTG GAGCCTCCAAGAGTTATATCAGTGACTTGTTAAATGGAGTGAACTTAATGGAATCCCGGGTCTATGTTCTCCATGTTAAT CCTGATTCTGGTTTGCAAATTTTTTCTATTGCCAAGAAGCTTGGAATGATAACCAGTGGCTATGTGTGGATTGCAACAGA TTGGCTTCCTTCAGTGCTGGATTCAATGGAGCAAGTTGACACTGGCACATTAAATCTCCTTCAAGGGGTTGTAGCTTTGC GCCACCACACTCCTGATAGTGATCTCAAAAACAAATTTTTCTCCAGGTTGAAGAACCTAAAAGGCATGCAGAAGTCAAGC TTCAACTCTTATGCATTGTATGCATATGATTCTGTTTGGTTAGCAGCCCGTGCTCTAGATGTTTTTACCAAAGAAGGGGG AAACATATCTTTCTCTTTTGATCCTAAGTTGCAAGACAATAATGGAAGCATGTTGCATTTATCATCGCTTCGCATTTTTG AAGGAGGTCCATTGTTTTTTCCCACAATCTTGGGAATGAACTTCACTGGTTTGAGTGGTCCAATTCAGTTTGATGGGGAA AGGAATCTGATTCATCCTGCATATGATGTCCTGAACATTGGTGAATTTGGATCCCGGAGAATTGGTTATTGGTCTAATTA CTCTGGTCTATCAGTCATAGCACCGGAAGTGTTATATAAGAAGCCAGCCAACACTTCAACAAGCAATGAGAAACTGGACA GTGTTCTGTGGCCTGGAGAAACTATAGCTACACCAAAAGGGTGGGTTTTCCCCAACAACGGAAAGCCGCTGCGAATAGCA GTGCCTCTTAGAGTTGGCTACTTGGAGATTGTATCTAAAGACAAGAACCCTCCTGGGGTAAAAGGCTTTTGCATTGATGT CTTTGAAGCAGCCATAAATTTGCTGCCTTATCCTGTCCCAAGACAATATATATTATTTGGAAATGGTGATAGAAATCCCA GCTATAGTGACCTTGCCAATCAGGTTGCATCAAATAACTATGATGCAGCTGTTGGAGATATTACAATTGTCCCAAACAGG ACAAGGATTTTGGATTTCACTCAACCTTTCATGGAATCAGGGCTGGTTGTTGTTGTTCCTGTCAAGGAGGTCAAATCAAG CCCTTGGTCTTTCCTTAAGCCATTCACTGCTCAAATGTGGTGTGTTACTGGTGCCTTTTTTCTTTTTGTGGGAGCTGTTG TATGGGTTCTTGAGCACCGGCACAATCCAGAGTTCCGTGGTCCACCCAAGAAACAAATTATGACAATCTTTTGGTTTACT TTCTCAACAATGTTTTTCTCACACAGAGAAAACACTGTGAGTGGTCTTGGGCGATTCGTGCTGATCATATGGCTTTTCGT CGTGCTTATTATCAATTCAAGCTACACAGCAAGCTTAACATCCATACTCACAGTGCAGCAACTGTCTTCACAAATTGAAG GAATTGACAGCTTGATCTCAGGTACTCAGCCAATTGGAGTTCAAGATGGGTCCTTTGCTCGGAAGTACCTGATAGATGAA CTCAATATACAAGAATCTAGGATAGTTTCGTTGAGAGATCAGTCGGCATATGCTGATGCCCTTATGCGTGGACCGAAAGG GGGAGGGGTTGTAGCCATTGTTGATGAGCTTCCTTATATTCAGCTCTTCATGTCCAATACCAACTGTAAGTTCAGAACCG TTGGGCAGGAGTTCACTAAAAGTGGTTGGGGATATGCATTTCAGAGGGACTCTCCCCTTGCTGTTGATATGTCAACCGCC ATTCTTCAACTCTCCGAGAATGGTGACCTGCAAAAGATCCATGACAAATGGCTTCTAAAACATGATTGCACAGCACAACT CGATGATATCGATTCAAATAAGCTATCTCTGAGCAGCTTCTGGGGTCTCTTTCTCATATGTGGCATAGCATGTCTCCTTA CTTTGATTGCATTCTTTGTTAGAGTGTTCTGTCAATACATGAAATTTATCCCAGAGCCTGAGGTAGCTGACGAGGAAGTT CAATCAAGCAGGTCTAGACGGTTTATGAAAATCGGATCTGCTAGCTTCAAGGACTTGATTGATTTCGTGGATAAGAGAGA AAAAGAAATCAAAGAGGTACTTAGGCAGAAGAGTAACAAGAGGAGACGCAGCCAGAGCATAGATGGTCAATCAAGTTCAC CTGCCTAA
Protein sequence (LotjaGi3g1v0189900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEVLWVKVLFFMVFCLWIPMDVMGMTGTSAVNSSVSSNPSVLRIGALFTLDSVIGRSAKPGILAAIEDVNADKIILPGIK LEVLLHDTNCSGFLGTVEALQLMEHEVVAVIGPQSSGIAHIISHVANELHVPLLSFGATDPSLSSLQYPYFIRTTHSDYF QMYAVADLVDHYRWREVIAIFVDDDNGRNGISALGDALAKKRGKISYKAALPPGASKSYISDLLNGVNLMESRVYVLHVN PDSGLQIFSIAKKLGMITSGYVWIATDWLPSVLDSMEQVDTGTLNLLQGVVALRHHTPDSDLKNKFFSRLKNLKGMQKSS FNSYALYAYDSVWLAARALDVFTKEGGNISFSFDPKLQDNNGSMLHLSSLRIFEGGPLFFPTILGMNFTGLSGPIQFDGE RNLIHPAYDVLNIGEFGSRRIGYWSNYSGLSVIAPEVLYKKPANTSTSNEKLDSVLWPGETIATPKGWVFPNNGKPLRIA VPLRVGYLEIVSKDKNPPGVKGFCIDVFEAAINLLPYPVPRQYILFGNGDRNPSYSDLANQVASNNYDAAVGDITIVPNR TRILDFTQPFMESGLVVVVPVKEVKSSPWSFLKPFTAQMWCVTGAFFLFVGAVVWVLEHRHNPEFRGPPKKQIMTIFWFT FSTMFFSHRENTVSGLGRFVLIIWLFVVLIINSSYTASLTSILTVQQLSSQIEGIDSLISGTQPIGVQDGSFARKYLIDE LNIQESRIVSLRDQSAYADALMRGPKGGGVVAIVDELPYIQLFMSNTNCKFRTVGQEFTKSGWGYAFQRDSPLAVDMSTA ILQLSENGDLQKIHDKWLLKHDCTAQLDDIDSNKLSLSSFWGLFLICGIACLLTLIAFFVRVFCQYMKFIPEPEVADEEV QSSRSRRFMKIGSASFKDLIDFVDKREKEIKEVLRQKSNKRRRSQSIDGQSSSPA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 24 | 24 | - | – | |
| Phobius | 1 | 7 | 7 | - | – | |
| Phobius | 1 | 30 | 30 | - | – | |
| PIRSF | 4 | 934 | 931 | 0.0 | ||
| Phobius | 8 | 18 | 11 | - | – | |
| Phobius | 19 | 30 | 12 | - | – | |
| PANTHER | 30 | 921 | 892 | 0.0 | – | |
| PANTHER | 30 | 921 | 892 | 0.0 | – | |
| Phobius | 31 | 596 | 566 | - | – | |
| SUPERFAMILY | 37 | 469 | 433 | 4.71E-87 | ||
| CDD | 43 | 434 | 392 | 5.1104E-136 | – | |
| PRINTS | 55 | 71 | 17 | 3.9E-7 | – | |
| Pfam | 60 | 413 | 354 | 1.9E-78 | ||
| Gene3D | 63 | 406 | 344 | 8.2E-91 | – | |
| PRINTS | 115 | 143 | 29 | 3.9E-7 | – | |
| Gene3D | 157 | 430 | 274 | 8.2E-91 | – | |
| PRINTS | 328 | 340 | 13 | 3.9E-7 | – | |
| SUPERFAMILY | 455 | 819 | 365 | 5.76E-48 | – | |
| CDD | 475 | 818 | 344 | 2.52416E-75 | – | |
| SMART | 478 | 820 | 343 | 2.4E-57 | ||
| Gene3D | 500 | 833 | 334 | 4.6E-86 | – | |
| Pfam | 532 | 819 | 288 | 6.9E-20 | ||
| Gene3D | 574 | 783 | 210 | 4.6E-86 | – | |
| Gene3D | 584 | 860 | 277 | 4.6E-86 | – | |
| TMHMM | 595 | 617 | 23 | - | – | |
| Phobius | 597 | 617 | 21 | - | – | |
| Phobius | 618 | 628 | 11 | - | – | |
| Phobius | 629 | 647 | 19 | - | – | |
| Phobius | 648 | 658 | 11 | - | – | |
| TMHMM | 654 | 676 | 23 | - | – | |
| Phobius | 659 | 683 | 25 | - | – | |
| Phobius | 684 | 839 | 156 | - | – | |
| Pfam | 820 | 851 | 32 | 2.4E-36 | ||
| TMHMM | 838 | 860 | 23 | - | – | |
| Phobius | 840 | 863 | 24 | - | – | |
| Phobius | 864 | 935 | 72 | - | – | |
| Coils | 903 | 923 | 21 | - | – | |
| MobiDBLite | 914 | 935 | 22 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ligand-gated ion channel activity | Enables the transmembrane transfer of an ion by a channel that opens when a specific ligand has been bound by the channel complex or one of its constituent parts. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of LotjaGi3g1v0189900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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