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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001638
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 35 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.591s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0257159.2
n.a. PREDICTED: glutamate receptor 3.7-like [Glycine max] gi|356547081|ref|XP_003541946.1| chr0 133491492 133497697 -
2 domain predictions
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Lj0g3v0303269.1
n.a. Glutamate receptor 2.8 [Medicago truncatula] gi|357465943|ref|XP_003603256.1| chr0 157844779 157848382 -
2 domain predictions
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Lj0g3v0316609.1
n.a. PREDICTED: glutamate receptor 2.7-like [Glycine max] gi|356519637|ref|XP_003528477.1| chr0 165407516 165409490 -
2 domain predictions
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Lj0g3v0316649.1
n.a. PREDICTED: glutamate receptor 2.7-like [Glycine max] gi|356519637|ref|XP_003528477.1| chr0 165415029 165416580 -
2 domain predictions
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Lj1g3v1798720.1
n.a. Glutamate receptor 2.8 [Medicago truncatula] gi|357465943|ref|XP_003603256.1| chr1 21722281 21740390 -
2 domain predictions
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Lj1g3v1798760.1
n.a. Glutamate receptor 2.8 [Medicago truncatula] gi|357465943|ref|XP_003603256.1| chr1 21746114 21749258 -
2 domain predictions
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Lj1g3v3385800.1
n.a. Glutamate-gated kainate-type ion channel receptor subunit GluR5 [Medicago truncatula] gi|357467129|ref|XP_003603849.1| chr1 39033501 39037708 +
2 domain predictions
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Lj2g3v1589610.2
n.a. PREDICTED: glutamate receptor 3.6-like [Glycine max] gi|356496551|ref|XP_003517130.1| chr2 25269420 25272134 -
2 domain predictions
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Lj2g3v1599820.1
n.a. PREDICTED: glutamate receptor 3.6-like [Glycine max] gi|356529661|ref|XP_003533407.1| chr2 25313568 25317944 +
2 domain predictions
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Lj2g3v3403240.3
n.a. PREDICTED: glutamate receptor 3.2-like [Glycine max] gi|356553421|ref|XP_003545055.1| chr2 43114860 43119717 +
2 domain predictions
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Lj3g3v1324950.1
n.a. PREDICTED: glutamate receptor 3.4-like isoform X1 [Cicer arietinum] gi|502083253|ref|XP_004487403.1| chr3 17129410 17134556 +
2 domain predictions
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Lj4g3v0496530.1
n.a. PREDICTED: glutamate receptor 2.7-like [Glycine max] gi|356519637|ref|XP_003528477.1| chr4 8321287 8325957 -
2 domain predictions
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Lj6g3v2006120.2
n.a. PREDICTED: glutamate receptor 2.7-like [Glycine max] gi|356546603|ref|XP_003541714.1| chr6 23379825 23384590 +
2 domain predictions
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Lj6g3v2006160.1
n.a. PREDICTED: glutamate receptor 2.7-like [Cicer arietinum] gi|502078180|ref|XP_004485863.1| chr6 23389012 23391177 +
2 domain predictions
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LotjaGi1g1v0001000.1
n.a. Glutamate receptor; TAIR: AT4G35290.1 glutamate receptor 2; Swiss-Prot: sp|Q93YT1|GLR32_ARATH Glutamate receptor 3.2; TrEMBL-Plants: tr|I1M634|I1M634_SOYBN Glutamate receptor; Found in the gene: LotjaGi1g1v0001000 LjG1.1_chr1 393196 397770 -
2 domain predictions
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LotjaGi1g1v0373900_LC.1
n.a. Glutamate receptor; TAIR: AT2G29120.1 glutamate receptor 2.7; Swiss-Prot: sp|Q8LGN0|GLR27_ARATH Glutamate receptor 2.7; TrEMBL-Plants: tr|A0A072VCN2|A0A072VCN2_MEDTR Glutamate receptor; Found in the gene: LotjaGi1g1v0373900_LC LjG1.1_chr1 85216172 85218229 -
2 domain predictions
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LotjaGi1g1v0374200.1
n.a. Glutamate receptor; TAIR: AT2G29120.1 glutamate receptor 2.7; Swiss-Prot: sp|Q8LGN0|GLR27_ARATH Glutamate receptor 2.7; TrEMBL-Plants: tr|G7J966|G7J966_MEDTR Glutamate receptor 3.2; Found in the gene: LotjaGi1g1v0374200 LjG1.1_chr1 85226034 85234371 -
2 domain predictions
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LotjaGi1g1v0376200.1
n.a. Glutamate receptor; TAIR: AT2G29120.1 glutamate receptor 2.7; Swiss-Prot: sp|Q8LGN0|GLR27_ARATH Glutamate receptor 2.7; TrEMBL-Plants: tr|G7J966|G7J966_MEDTR Glutamate receptor 3.2; Found in the gene: LotjaGi1g1v0376200 LjG1.1_chr1 85515602 85526043 -
2 domain predictions
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LotjaGi1g1v0376200.2
n.a. Glutamate receptor; TAIR: AT2G29120.1 glutamate receptor 2.7; Swiss-Prot: sp|Q8LGN0|GLR27_ARATH Glutamate receptor 2.7; TrEMBL-Plants: tr|G7J966|G7J966_MEDTR Glutamate receptor 3.2; Found in the gene: LotjaGi1g1v0376200 LjG1.1_chr1 85515602 85526043 -
2 domain predictions
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LotjaGi1g1v0567700.1
n.a. Glutamate receptor; TAIR: AT1G42540.1 glutamate receptor 3.3; Swiss-Prot: sp|Q9C8E7|GLR33_ARATH Glutamate receptor 3.3; TrEMBL-Plants: tr|A0A1J7I836|A0A1J7I836_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0567700 LjG1.1_chr1 110102093 110110997 +
2 domain predictions
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LotjaGi2g1v0353900.1
n.a. Glutamate receptor; TAIR: AT3G51480.1 glutamate receptor 3.6; Swiss-Prot: sp|Q84W41|GLR36_ARATH Glutamate receptor 3.6; TrEMBL-Plants: tr|G7K195|G7K195_MEDTR Glutamate receptor; Found in the gene: LotjaGi2g1v0353900 LjG1.1_chr2 83031222 83040354 -
2 domain predictions
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LotjaGi2g1v0353900.2
n.a. Glutamate receptor; TAIR: AT3G51480.1 glutamate receptor 3.6; Swiss-Prot: sp|Q84W41|GLR36_ARATH Glutamate receptor 3.6; TrEMBL-Plants: tr|G7K195|G7K195_MEDTR Glutamate receptor; Found in the gene: LotjaGi2g1v0353900 LjG1.1_chr2 83035516 83039362 -
2 domain predictions
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LotjaGi3g1v0189800.2
n.a. Glutamate receptor; TAIR: AT2G32400.1 glutamate receptor 5; Swiss-Prot: sp|Q9SDQ4|GLR37_ARATH Glutamate receptor 3.7; TrEMBL-Plants: tr|A0A0B2RVP7|A0A0B2RVP7_GLYSO Glutamate receptor; Found in the gene: LotjaGi3g1v0189800 LjG1.1_chr3 27321987 27328541 +
2 domain predictions
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LotjaGi3g1v0189800.3
n.a. Glutamate receptor; TAIR: AT2G32400.1 glutamate receptor 5; Swiss-Prot: sp|Q9SDQ4|GLR37_ARATH Glutamate receptor 3.7; TrEMBL-Plants: tr|A0A0R0H9K3|A0A0R0H9K3_SOYBN Glutamate receptor; Found in the gene: LotjaGi3g1v0189800 LjG1.1_chr3 27322157 27328410 +
2 domain predictions
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LotjaGi3g1v0189900.1
n.a. Glutamate receptor; TAIR: AT1G05200.1 glutamate receptor 3.4; Swiss-Prot: sp|Q8GXJ4|GLR34_ARATH Glutamate receptor 3.4; TrEMBL-Plants: tr|G7IU03|G7IU03_MEDTR Glutamate receptor; Found in the gene: LotjaGi3g1v0189900 LjG1.1_chr3 27333658 27342929 +
2 domain predictions
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LotjaGi3g1v0189900.2
n.a. Glutamate receptor; TAIR: AT1G05200.1 glutamate receptor 3.4; Swiss-Prot: sp|Q8GXJ4|GLR34_ARATH Glutamate receptor 3.4; TrEMBL-Plants: tr|G7IU03|G7IU03_MEDTR Glutamate receptor; Found in the gene: LotjaGi3g1v0189900 LjG1.1_chr3 27333933 27339871 +
2 domain predictions
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LotjaGi3g1v0465600.1
n.a. Glutamate receptor; TAIR: AT1G05200.1 glutamate receptor 3.4; Swiss-Prot: sp|Q8GXJ4|GLR34_ARATH Glutamate receptor 3.4; TrEMBL-Plants: tr|A0A0L9V5X5|A0A0L9V5X5_PHAAN Glutamate receptor; Found in the gene: LotjaGi3g1v0465600 LjG1.1_chr3 88094741 88101001 -
2 domain predictions
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LotjaGi4g1v0065400.1
n.a. Glutamate receptor; TAIR: AT2G29120.1 glutamate receptor 2.7; Swiss-Prot: sp|Q8LGN0|GLR27_ARATH Glutamate receptor 2.7; TrEMBL-Plants: tr|A0A072UMP3|A0A072UMP3_MEDTR Glutamate receptor 3.4; Found in the gene: LotjaGi4g1v0065400 LjG1.1_chr4 8160850 8167178 -
2 domain predictions
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LotjaGi4g1v0065500.1
n.a. Glutamate receptor; TAIR: AT2G29120.1 glutamate receptor 2.7; Swiss-Prot: sp|Q8LGN0|GLR27_ARATH Glutamate receptor 2.7; TrEMBL-Plants: tr|A0A072UMP3|A0A072UMP3_MEDTR Glutamate receptor 3.4; Found in the gene: LotjaGi4g1v0065500 LjG1.1_chr4 8169265 8174411 -
2 domain predictions
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LotjaGi4g1v0134800.1
n.a. Glutamate receptor; TAIR: AT3G51480.1 glutamate receptor 3.6; Swiss-Prot: sp|Q84W41|GLR36_ARATH Glutamate receptor 3.6; TrEMBL-Plants: tr|A0A0B2S0T6|A0A0B2S0T6_GLYSO Glutamate receptor; Found in the gene: LotjaGi4g1v0134800 LjG1.1_chr4 19659337 19664888 -
2 domain predictions
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LotjaGi4g1v0134800.2
n.a. Glutamate receptor; TAIR: AT3G51480.1 glutamate receptor 3.6; Swiss-Prot: sp|Q84W41|GLR36_ARATH Glutamate receptor 3.6; TrEMBL-Plants: tr|A0A0B2S0T6|A0A0B2S0T6_GLYSO Glutamate receptor; Found in the gene: LotjaGi4g1v0134800 LjG1.1_chr4 19659526 19664963 -
2 domain predictions
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LotjaGi4g1v0134800.3
n.a. Glutamate receptor; TAIR: AT3G51480.1 glutamate receptor 3.6; Swiss-Prot: sp|Q84W41|GLR36_ARATH Glutamate receptor 3.6; TrEMBL-Plants: tr|I1L4P7|I1L4P7_SOYBN Glutamate receptor; Found in the gene: LotjaGi4g1v0134800 LjG1.1_chr4 19659981 19663495 -
2 domain predictions
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LotjaGi4g1v0134800.4
n.a. Glutamate receptor; TAIR: AT3G51480.1 glutamate receptor 3.6; Swiss-Prot: sp|Q84W41|GLR36_ARATH Glutamate receptor 3.6; TrEMBL-Plants: tr|A0A0B2S0T6|A0A0B2S0T6_GLYSO Glutamate receptor; Found in the gene: LotjaGi4g1v0134800 LjG1.1_chr4 19659981 19663942 -
2 domain predictions
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LotjaGi6g1v0325800.1
n.a. Glutamate receptor; TAIR: AT2G29120.1 glutamate receptor 2.7; Swiss-Prot: sp|Q8LGN0|GLR27_ARATH Glutamate receptor 2.7; TrEMBL-Plants: tr|A0A151QV07|A0A151QV07_CAJCA Glutamate receptor; Found in the gene: LotjaGi6g1v0325800 LjG1.1_chr6 64107490 64113625 +
2 domain predictions
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LotjaGi6g1v0325900.1
n.a. Glutamate receptor; TAIR: AT2G29120.1 glutamate receptor 2.7; Swiss-Prot: sp|Q8LGN0|GLR27_ARATH Glutamate receptor 2.7; TrEMBL-Plants: tr|K7M1F5|K7M1F5_SOYBN Glutamate receptor; Found in the gene: LotjaGi6g1v0325900 LjG1.1_chr6 64115166 64119785 +
2 domain predictions
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