Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

PR01176

Source: PRINTS

Description

Metabotropic gamma-aminobutyric acid type B receptor signature

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 11

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0257159.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: glutamate receptor 3.7-like [Glycine max] gi\|356547081\|ref\|XP_003541946.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.287.70 G3DSA:3.40.190.10 G3DSA:3.40.50.2300 IPR001320 IPR001828 IPR019594 IPR028082 NON_CYTOPLASMIC_DOMAIN PF00060 PF01094 PF10613 PR01176 PTHR18966 PTHR18966:SF241 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00079 SSF53822 SSF53850 SignalP-noTM_EUK TMhelix TRANSMEMBRANE cd06366	26
Lj0g3v0257159.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: glutamate receptor 3.7-like [Glycine max] gi\|356547081\|ref\|XP_003541946.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.287.70 G3DSA:3.40.190.10 G3DSA:3.40.50.2300 IPR001320 IPR001638 IPR001828 IPR017103 IPR028082 NON_CYTOPLASMIC_DOMAIN PF00060 PF00497 PF01094 PIRSF037090 PR01176 PTHR18966 PTHR18966:SF241 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00079 SSF53822 SSF53850 SignalP-noTM_EUK TMhelix TRANSMEMBRANE cd06366 cd13686	29
Lj3g3v1324950.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: glutamate receptor 3.4-like isoform X1 [Cicer arietinum] gi\|502083253\|ref\|XP_004487403.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.287.70 G3DSA:3.40.190.10 G3DSA:3.40.50.2300 IPR001320 IPR001638 IPR001828 IPR017103 IPR028082 NON_CYTOPLASMIC_DOMAIN PF00060 PF00497 PF01094 PIRSF037090 PR01176 PTHR18966 PTHR18966:SF190 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00079 SSF53822 SSF53850 SignalP-noTM_EUK TMhelix TRANSMEMBRANE cd06366	28
Lj3g3v2903020.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: glutamate receptor 3.4-like [Glycine max] gi\|356544812\|ref\|XP_003540841.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.287.70 G3DSA:3.40.190.10 G3DSA:3.40.50.2300 IPR001320 IPR001828 IPR019594 IPR028082 NON_CYTOPLASMIC_DOMAIN PF00060 PF01094 PF10613 PR01176 PTHR18966 PTHR18966:SF190 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00079 SSF53822 SSF53850 SignalP-noTM_EUK TMhelix TRANSMEMBRANE cd06366	26
LotjaGi1g1v0567700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Glutamate receptor; TAIR: AT1G42540.1 glutamate receptor 3.3; Swiss-Prot: sp\|Q9C8E7\|GLR33_ARATH Glutamate receptor 3.3; TrEMBL-Plants: tr\|A0A1J7I836\|A0A1J7I836_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0567700	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.287.70 G3DSA:3.40.190.10 G3DSA:3.40.50.2300 IPR000337 IPR001320 IPR001638 IPR001828 IPR017103 IPR028082 NON_CYTOPLASMIC_DOMAIN PF00060 PF00497 PF01094 PIRSF037090 PR00248 PR01176 PTHR18966 PTHR18966:SF447 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00079 SSF53822 SSF53850 SignalP-TM SignalP-noTM TMhelix TRANSMEMBRANE cd06366 cd13686 mobidb-lite	33
LotjaGi3g1v0189800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Glutamate receptor; TAIR: AT2G32400.1 glutamate receptor 5; Swiss-Prot: sp\|Q9SDQ4\|GLR37_ARATH Glutamate receptor 3.7; TrEMBL-Plants: tr\|A0A0B2RVP7\|A0A0B2RVP7_GLYSO Glutamate receptor; Found in the gene: LotjaGi3g1v0189800	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.287.70 G3DSA:3.40.190.10 G3DSA:3.40.50.2300 IPR001320 IPR001828 IPR019594 IPR028082 NON_CYTOPLASMIC_DOMAIN PF00060 PF01094 PF10613 PR01176 PTHR18966 PTHR18966:SF427 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00079 SSF53822 SSF53850 SignalP-noTM TMhelix TRANSMEMBRANE cd06366	26
LotjaGi3g1v0189800.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Glutamate receptor; TAIR: AT2G32400.1 glutamate receptor 5; Swiss-Prot: sp\|Q9SDQ4\|GLR37_ARATH Glutamate receptor 3.7; TrEMBL-Plants: tr\|A0A0B2RVP7\|A0A0B2RVP7_GLYSO Glutamate receptor; Found in the gene: LotjaGi3g1v0189800	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.287.70 G3DSA:3.40.190.10 G3DSA:3.40.50.2300 IPR001320 IPR001638 IPR001828 IPR017103 IPR028082 NON_CYTOPLASMIC_DOMAIN PF00060 PF00497 PF01094 PIRSF037090 PR01176 PTHR18966 PTHR18966:SF427 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00079 SSF53822 SSF53850 SignalP-noTM TMhelix TRANSMEMBRANE cd06366 cd13686	29
LotjaGi3g1v0189900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Glutamate receptor; TAIR: AT1G05200.1 glutamate receptor 3.4; Swiss-Prot: sp\|Q8GXJ4\|GLR34_ARATH Glutamate receptor 3.4; TrEMBL-Plants: tr\|G7IU03\|G7IU03_MEDTR Glutamate receptor; Found in the gene: LotjaGi3g1v0189900	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:1.10.287.70 G3DSA:3.40.190.10 G3DSA:3.40.50.2300 IPR001320 IPR001638 IPR001828 IPR017103 IPR028082 NON_CYTOPLASMIC_DOMAIN PF00060 PF00497 PF01094 PIRSF037090 PR01176 PTHR18966 PTHR18966:SF430 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00079 SSF53822 SSF53850 SignalP-noTM TMhelix TRANSMEMBRANE cd06366 cd13686 mobidb-lite	31
LotjaGi3g1v0189900.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Glutamate receptor; TAIR: AT1G05200.1 glutamate receptor 3.4; Swiss-Prot: sp\|Q8GXJ4\|GLR34_ARATH Glutamate receptor 3.4; TrEMBL-Plants: tr\|G7IU03\|G7IU03_MEDTR Glutamate receptor; Found in the gene: LotjaGi3g1v0189900	Domains CYTOPLASMIC_DOMAIN Coil G3DSA:1.10.287.70 G3DSA:3.40.190.10 G3DSA:3.40.50.2300 IPR001320 IPR001638 IPR001828 IPR017103 IPR028082 NON_CYTOPLASMIC_DOMAIN PF00060 PF00497 PF01094 PIRSF037090 PR01176 PTHR18966 PTHR18966:SF430 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00079 SSF53822 SSF53850 SignalP-noTM TMhelix TRANSMEMBRANE cd06366 cd13686 mobidb-lite	31
LotjaGi3g1v0465600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Glutamate receptor; TAIR: AT1G05200.1 glutamate receptor 3.4; Swiss-Prot: sp\|Q8GXJ4\|GLR34_ARATH Glutamate receptor 3.4; TrEMBL-Plants: tr\|A0A0L9V5X5\|A0A0L9V5X5_PHAAN Glutamate receptor; Found in the gene: LotjaGi3g1v0465600	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.287.70 G3DSA:3.40.190.10 G3DSA:3.40.50.2300 IPR001320 IPR001638 IPR001828 IPR017103 IPR028082 NON_CYTOPLASMIC_DOMAIN PF00060 PF00497 PF01094 PIRSF037090 PR01176 PTHR18966 PTHR18966:SF430 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00079 SSF53822 SSF53850 SignalP-noTM TMhelix TRANSMEMBRANE cd06366 cd13686	29
LotjaGi3g1v0465600.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Glutamate receptor; TAIR: AT1G05200.5 glutamate receptor 3.4; Swiss-Prot: sp\|Q8GXJ4\|GLR34_ARATH Glutamate receptor 3.4; TrEMBL-Plants: tr\|A0A0L9V5X5\|A0A0L9V5X5_PHAAN Glutamate receptor; Found in the gene: LotjaGi3g1v0465600	Domains CYTOPLASMIC_DOMAIN G3DSA:1.10.287.70 G3DSA:3.40.190.10 G3DSA:3.40.50.2300 IPR001320 IPR001828 IPR019594 IPR028082 NON_CYTOPLASMIC_DOMAIN PF01094 PF10613 PR01176 PTHR18966 PTHR18966:SF430 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SM00079 SSF53822 SSF53850 SignalP-noTM TMhelix TRANSMEMBRANE cd06366	25

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
cd06366	CDD	1	9.09