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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0195300 |
| Transcript ID | LotjaGi3g1v0195300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Leucine-rich repeat receptor-like protein kinase family protein; TAIR: AT1G45616.1 receptor like protein 6; Swiss-Prot: sp|Q9C9H7|RLP12_ARATH Receptor-like protein 12; TrEMBL-Plants: tr|G7JQ90|G7JQ90_MEDTR Verticillium wilt disease resistance protein; Found in the gene: LotjaGi3g1v0195300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:28425861..28429390) extracted from Lotus japonicus Gifu genome v1.2.
ATCTATAAATGGAGGAAAAAGAAATGTTAATAATGATAAAAGAAAGGCCTCTTCAACATTCTCAAGTCACCAGATACACC CTTCTCATAATTCACAATGAGAGCACACATAATCTTTTGGCTTTTCAAGATGCTTTTCATCTTAACAAATTTCAGCACCA ACATCTTTGTGGCAAATAGCTACTGTCTTGGCCATCAACGTTCAGCTTTGCTCCAGTTGAAGAACAACCTCACATTTGAC CCTGCAAAATCCAAAAAACTAGTTCTCTGGAACCAAAGTGATGATGATTGTTGCAAATGGCATGGGGTAACATGCTATGA AGGACATGTCACAGCCCTTGATCTCAGTCAAGAATTTATCTCTGGAGTTCTTGATGATTCAAGTGCTCTTTTCAACCTGC AAAATTTACAAACCTTGAACTTGGCTTTCAATGATTTTCATTCTGTGATTCCTCTAGAGCTCTTCAATTTGAAGAATTTG ATGTACCTGAACTTCTCCATGGCTGGCTTTCAGGGGAAGATTCCAAAAGAGATTTCTCAACTTAAAAGGTTGGTTATTCT TGACCTGTCATCAAACAATCTTTTTGGACCAATTGATTCTTCACTAGCTGATCTTAAATCACTATCTATTCTGCAATTGA GCCACAACAATTTGTCAAGCACAGTGCCTGATTCCTTTGCCAATTTCTCCAATTTAACCACTCTGCATCTCATCAATTGT AGCTTAAATGGCTATTTTCCAAAAGAAATTTTCCACATAAAAACTTTAGAGGTCCTTGATGTATCAGAAAACAAATTTCT TCATGGTTCTTTCCCAAATTTTACACCAAGTTGGTCTCTTCACAATTTGGATGTTAGCCATACAAATTTCTCAGGACAGA TTCCAGAGTCTATTTCCAATCTGAAGAAGTTGACTAAAATTGATACATCTTACTGCCAATTCAATGGAACACTTCCAAGT TCAATGTCAGAACTCACCCAACTTGTTCATATAGACTTGTCTTCCAATAACTTTACAGGTTCACTTCCTTCCTTCAACAA CTCCAAGAACCTCACACGCATATCCCTCTTTCATAACCATTTAAGTGGAGAATTACCGTCCAGCCATTTTGAGGGCCTTT CAAATCTTGTCAGCATTGATTTAGGGTTCAATTTTTTCACTGGGAATGTCCCCAAATCTGTTCCTAAACTCCCAAATTTG AGAGAACTTAGCCTTCCCCATAATCAACTGAGTGGTGTCTTGGGTGAGTTTGACAATGCATCTTCCCCAATGTTAGAGGT GCTTGATTTAGGCAACAATAATTTAGAAGGGCCTTTTCCTTTGTCTGTGTTTAACCTTAGAACACTACATGTCATTCAAC TTTCTTCAAACAAGTTTAATGGCACGGTAAAATTGGACCTGATTCGAAGGTTGAGCATTTTGAACACACTAGGCCTTGGA TATAACAGTTTGACGGTTGATATCAACTTCAGAGATGATCAAGACTTGTCACCATTTCCTAGTTTGACAAATGTGATGTT GGCATCCTGCAAGATGAAAGGAATCCCCAGTTTCTTGAGAAACCAGTCCACAATACTATATCTTGACCTAGCTGACAATG AGATTGAAGGAGCGATACCGAACTGGATTTGGCGACTCGAAGTTCTTGCTCAAATGAATCTTTCCAAAAACTCTTTCACA AGTTTCGAAGGGAGTTTCTTGAACATTAGCTCTTTTCTTTTTGTACTTGATATCAGTTCAAACCAACTGCAAGGGCCTAT TCCTTTCATTCCACAGCATGGATATTATCTGGACTACTCAAACAACAGATTCAGCTCATTCAATCCACCGGACATTGGGA ATCACCTCACTTTCACAACTATTCTGTCTCTTTCAAACAACAGTTTCCATGGACCAATCCATGAATCCTTCTGCAATGCT TCAAATATTCTCCAGCTAGATCTTTCCGACAATAACTTTACCGGGGAGATTCCCGAGTGCTTTGCAAGAATGAGTAGCAC TCTCAGGGTATTAAATTTGGCTGGAAACAAGCTCCAAGGTTACATTCCTAAAATTATTTCAACTTCATGTCAATTGAAGT TGTTTGATTTAAATGACAATCTGTTGGAAGGTACCATCCCGGAAGCTTTGGCTAATTGCCAGAAACTACAAGTCCTAAAC CTTGGAAAGAATGTGTTAACTGACAGGTTTCCATGTTTCTTAAGCAACATCACCACCCTGAGAATCATGATTTTGAGGTC GAACAAGTTCCATGGGTCTATTGGATGCTCAAACAGCACTAGTGATTGGCAGAATCTTCATATTGTTGATCTGGCCTACA ATAAATTCAGTGGCACGATACCAGGAGCACTTCTAAACAGTTGGAAAGCAATGATGCGGGATGAAGATAAAGACGGGACA GAATTTGGCCACTTGTCTTTGGATCTTGTTGACAACTACAATCCTACGAGCTTTCAGGATGTAGCTTCACACTTGAGCAA AAAACTTGGAGAAAAATTGACTGAACTTGTTGCAAACGAATCTCGCTCTATCCTCGAGCAAGGTTCCACAGACTACTATT CAGTGGATATTGCTCATTACCAGGATTCAATTAACATTGTCAACAAAGGTCATCAAGTGAAGCTGGTCAAGATTCAAATG GCTTTAACTTATGTGGACATGTCAAGCAACTATCTGGAGGGGCCAATACCCAATGAACTAATGAATTTCAAGGCAATGAA TGCTCTGAACCTGTCACATAATGCATTCATGGGCCATATCCCATCAACTATTGGGAATTTGAAGGAAATGGAGTCTTTAG ACTTGTCCAACAACTCTTTCAATGGAGAAATTCCTCATGAGCTTGCAAGTCTACATTTCCTTGCATATCTGAATCTCTCT TACAATCACTTGGTGGGGGAAATTCCCAAAGGTACTCAAGTTCAATCATTTGATGCAAGTTCGTTTGAAGGGAATAAAGA GTTATGTGGACCTCCTCTAACCATGAGTTGCAGCAATGAATCGGGATTGTCACCACCAGCATCTGAAACACCTGACTCCG GTGCTGATAGTTCATCGGTTGATTGGAACTTCTTAAGTGTAGAGTTGGGATTTATTTTTGGGTTTGGAATTTTCATCATC CCCCTTATTTCTTGGAAGAAATGGAGAATGTGGTATTCCAAACATGCAGATGAGATGCTGTTCAGGATCATCCCCCAGCT TGATTTAGTGTATGAAAACCGCACAGCGAAGAGGTACAAAACTCTAAGGTGGAGGCGCTGAGCACTAATGTTTAGGACTT CTTAATAAGGACTATGTCCATTAATAAGGATGTGGCTTGTGATAAAGCAAACTATTCAGTAGTTTTCACATCCCTCAGTT TAATTTATGCTTGTTGTTAAAATGATATGTAAGTAATATACGTAGATACTAGTGTAGATTCAGTATTATTGTAACTATTT TTATTAATAATAACAGAAGTTTTACATTTGAATTTTATTTTATCAGAATTTGTTTAAAATAATATCCTGACGTCATGATC AATATTTACT
CDS sequence (LotjaGi3g1v0195300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGAGCACACATAATCTTTTGGCTTTTCAAGATGCTTTTCATCTTAACAAATTTCAGCACCAACATCTTTGTGGCAAA TAGCTACTGTCTTGGCCATCAACGTTCAGCTTTGCTCCAGTTGAAGAACAACCTCACATTTGACCCTGCAAAATCCAAAA AACTAGTTCTCTGGAACCAAAGTGATGATGATTGTTGCAAATGGCATGGGGTAACATGCTATGAAGGACATGTCACAGCC CTTGATCTCAGTCAAGAATTTATCTCTGGAGTTCTTGATGATTCAAGTGCTCTTTTCAACCTGCAAAATTTACAAACCTT GAACTTGGCTTTCAATGATTTTCATTCTGTGATTCCTCTAGAGCTCTTCAATTTGAAGAATTTGATGTACCTGAACTTCT CCATGGCTGGCTTTCAGGGGAAGATTCCAAAAGAGATTTCTCAACTTAAAAGGTTGGTTATTCTTGACCTGTCATCAAAC AATCTTTTTGGACCAATTGATTCTTCACTAGCTGATCTTAAATCACTATCTATTCTGCAATTGAGCCACAACAATTTGTC AAGCACAGTGCCTGATTCCTTTGCCAATTTCTCCAATTTAACCACTCTGCATCTCATCAATTGTAGCTTAAATGGCTATT TTCCAAAAGAAATTTTCCACATAAAAACTTTAGAGGTCCTTGATGTATCAGAAAACAAATTTCTTCATGGTTCTTTCCCA AATTTTACACCAAGTTGGTCTCTTCACAATTTGGATGTTAGCCATACAAATTTCTCAGGACAGATTCCAGAGTCTATTTC CAATCTGAAGAAGTTGACTAAAATTGATACATCTTACTGCCAATTCAATGGAACACTTCCAAGTTCAATGTCAGAACTCA CCCAACTTGTTCATATAGACTTGTCTTCCAATAACTTTACAGGTTCACTTCCTTCCTTCAACAACTCCAAGAACCTCACA CGCATATCCCTCTTTCATAACCATTTAAGTGGAGAATTACCGTCCAGCCATTTTGAGGGCCTTTCAAATCTTGTCAGCAT TGATTTAGGGTTCAATTTTTTCACTGGGAATGTCCCCAAATCTGTTCCTAAACTCCCAAATTTGAGAGAACTTAGCCTTC CCCATAATCAACTGAGTGGTGTCTTGGGTGAGTTTGACAATGCATCTTCCCCAATGTTAGAGGTGCTTGATTTAGGCAAC AATAATTTAGAAGGGCCTTTTCCTTTGTCTGTGTTTAACCTTAGAACACTACATGTCATTCAACTTTCTTCAAACAAGTT TAATGGCACGGTAAAATTGGACCTGATTCGAAGGTTGAGCATTTTGAACACACTAGGCCTTGGATATAACAGTTTGACGG TTGATATCAACTTCAGAGATGATCAAGACTTGTCACCATTTCCTAGTTTGACAAATGTGATGTTGGCATCCTGCAAGATG AAAGGAATCCCCAGTTTCTTGAGAAACCAGTCCACAATACTATATCTTGACCTAGCTGACAATGAGATTGAAGGAGCGAT ACCGAACTGGATTTGGCGACTCGAAGTTCTTGCTCAAATGAATCTTTCCAAAAACTCTTTCACAAGTTTCGAAGGGAGTT TCTTGAACATTAGCTCTTTTCTTTTTGTACTTGATATCAGTTCAAACCAACTGCAAGGGCCTATTCCTTTCATTCCACAG CATGGATATTATCTGGACTACTCAAACAACAGATTCAGCTCATTCAATCCACCGGACATTGGGAATCACCTCACTTTCAC AACTATTCTGTCTCTTTCAAACAACAGTTTCCATGGACCAATCCATGAATCCTTCTGCAATGCTTCAAATATTCTCCAGC TAGATCTTTCCGACAATAACTTTACCGGGGAGATTCCCGAGTGCTTTGCAAGAATGAGTAGCACTCTCAGGGTATTAAAT TTGGCTGGAAACAAGCTCCAAGGTTACATTCCTAAAATTATTTCAACTTCATGTCAATTGAAGTTGTTTGATTTAAATGA CAATCTGTTGGAAGGTACCATCCCGGAAGCTTTGGCTAATTGCCAGAAACTACAAGTCCTAAACCTTGGAAAGAATGTGT TAACTGACAGGTTTCCATGTTTCTTAAGCAACATCACCACCCTGAGAATCATGATTTTGAGGTCGAACAAGTTCCATGGG TCTATTGGATGCTCAAACAGCACTAGTGATTGGCAGAATCTTCATATTGTTGATCTGGCCTACAATAAATTCAGTGGCAC GATACCAGGAGCACTTCTAAACAGTTGGAAAGCAATGATGCGGGATGAAGATAAAGACGGGACAGAATTTGGCCACTTGT CTTTGGATCTTGTTGACAACTACAATCCTACGAGCTTTCAGGATGTAGCTTCACACTTGAGCAAAAAACTTGGAGAAAAA TTGACTGAACTTGTTGCAAACGAATCTCGCTCTATCCTCGAGCAAGGTTCCACAGACTACTATTCAGTGGATATTGCTCA TTACCAGGATTCAATTAACATTGTCAACAAAGGTCATCAAGTGAAGCTGGTCAAGATTCAAATGGCTTTAACTTATGTGG ACATGTCAAGCAACTATCTGGAGGGGCCAATACCCAATGAACTAATGAATTTCAAGGCAATGAATGCTCTGAACCTGTCA CATAATGCATTCATGGGCCATATCCCATCAACTATTGGGAATTTGAAGGAAATGGAGTCTTTAGACTTGTCCAACAACTC TTTCAATGGAGAAATTCCTCATGAGCTTGCAAGTCTACATTTCCTTGCATATCTGAATCTCTCTTACAATCACTTGGTGG GGGAAATTCCCAAAGGTACTCAAGTTCAATCATTTGATGCAAGTTCGTTTGAAGGGAATAAAGAGTTATGTGGACCTCCT CTAACCATGAGTTGCAGCAATGAATCGGGATTGTCACCACCAGCATCTGAAACACCTGACTCCGGTGCTGATAGTTCATC GGTTGATTGGAACTTCTTAAGTGTAGAGTTGGGATTTATTTTTGGGTTTGGAATTTTCATCATCCCCCTTATTTCTTGGA AGAAATGGAGAATGTGGTATTCCAAACATGCAGATGAGATGCTGTTCAGGATCATCCCCCAGCTTGATTTAGTGTATGAA AACCGCACAGCGAAGAGGTACAAAACTCTAAGGTGGAGGCGCTGA
Protein sequence (LotjaGi3g1v0195300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRAHIIFWLFKMLFILTNFSTNIFVANSYCLGHQRSALLQLKNNLTFDPAKSKKLVLWNQSDDDCCKWHGVTCYEGHVTA LDLSQEFISGVLDDSSALFNLQNLQTLNLAFNDFHSVIPLELFNLKNLMYLNFSMAGFQGKIPKEISQLKRLVILDLSSN NLFGPIDSSLADLKSLSILQLSHNNLSSTVPDSFANFSNLTTLHLINCSLNGYFPKEIFHIKTLEVLDVSENKFLHGSFP NFTPSWSLHNLDVSHTNFSGQIPESISNLKKLTKIDTSYCQFNGTLPSSMSELTQLVHIDLSSNNFTGSLPSFNNSKNLT RISLFHNHLSGELPSSHFEGLSNLVSIDLGFNFFTGNVPKSVPKLPNLRELSLPHNQLSGVLGEFDNASSPMLEVLDLGN NNLEGPFPLSVFNLRTLHVIQLSSNKFNGTVKLDLIRRLSILNTLGLGYNSLTVDINFRDDQDLSPFPSLTNVMLASCKM KGIPSFLRNQSTILYLDLADNEIEGAIPNWIWRLEVLAQMNLSKNSFTSFEGSFLNISSFLFVLDISSNQLQGPIPFIPQ HGYYLDYSNNRFSSFNPPDIGNHLTFTTILSLSNNSFHGPIHESFCNASNILQLDLSDNNFTGEIPECFARMSSTLRVLN LAGNKLQGYIPKIISTSCQLKLFDLNDNLLEGTIPEALANCQKLQVLNLGKNVLTDRFPCFLSNITTLRIMILRSNKFHG SIGCSNSTSDWQNLHIVDLAYNKFSGTIPGALLNSWKAMMRDEDKDGTEFGHLSLDLVDNYNPTSFQDVASHLSKKLGEK LTELVANESRSILEQGSTDYYSVDIAHYQDSINIVNKGHQVKLVKIQMALTYVDMSSNYLEGPIPNELMNFKAMNALNLS HNAFMGHIPSTIGNLKEMESLDLSNNSFNGEIPHELASLHFLAYLNLSYNHLVGEIPKGTQVQSFDASSFEGNKELCGPP LTMSCSNESGLSPPASETPDSGADSSSVDWNFLSVELGFIFGFGIFIIPLISWKKWRMWYSKHADEMLFRIIPQLDLVYE NRTAKRYKTLRWRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 141 | 141 | 0.0 | – | |
| Phobius | 1 | 28 | 28 | - | – | |
| Phobius | 1 | 4 | 4 | - | – | |
| SignalP_EUK | 1 | 20 | 20 | - | – | |
| PANTHER | 1 | 141 | 141 | 0.0 | – | |
| Phobius | 5 | 16 | 12 | - | – | |
| TMHMM | 7 | 29 | 23 | - | – | |
| Phobius | 17 | 28 | 12 | - | – | |
| Gene3D | 25 | 189 | 165 | 5.0E-46 | ||
| Phobius | 29 | 989 | 961 | - | – | |
| Pfam | 33 | 73 | 41 | 7.4E-11 | ||
| SUPERFAMILY | 81 | 427 | 347 | 8.63E-60 | – | |
| SMART | 101 | 125 | 25 | 17.0 | ||
| PANTHER | 145 | 243 | 99 | 0.0 | – | |
| PANTHER | 145 | 243 | 99 | 0.0 | – | |
| Pfam | 151 | 209 | 59 | 7.3E-8 | ||
| SMART | 173 | 196 | 24 | 4.5 | ||
| Gene3D | 190 | 286 | 97 | 4.4E-24 | ||
| PANTHER | 227 | 311 | 85 | 0.0 | – | |
| PANTHER | 227 | 311 | 85 | 0.0 | – | |
| Gene3D | 287 | 387 | 101 | 1.3E-23 | ||
| SMART | 293 | 315 | 23 | 83.0 | ||
| Pfam | 318 | 378 | 61 | 1.1E-6 | ||
| PANTHER | 341 | 1008 | 668 | 0.0 | – | |
| PANTHER | 341 | 1008 | 668 | 0.0 | – | |
| SMART | 365 | 387 | 23 | 25.0 | ||
| Gene3D | 388 | 460 | 73 | 5.3E-10 | ||
| SUPERFAMILY | 463 | 633 | 171 | 1.09E-26 | – | |
| Gene3D | 465 | 804 | 340 | 2.1E-74 | ||
| SMART | 514 | 536 | 23 | 380.0 | ||
| SUPERFAMILY | 578 | 962 | 385 | 2.79E-56 | – | |
| Gene3D | 823 | 968 | 146 | 7.8E-47 | ||
| SMART | 895 | 919 | 25 | 80.0 | ||
| Phobius | 990 | 1013 | 24 | - | – | |
| TMHMM | 991 | 1013 | 23 | - | – | |
| Phobius | 1014 | 1054 | 41 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi3g1v0195300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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