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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0293800 |
| Transcript ID | LotjaGi3g1v0293800.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | RING/U-box superfamily protein; TAIR: AT2G31510.1 IBR domain-containing protein; Swiss-Prot: sp|Q84RR0|ARI7_ARATH Probable E3 ubiquitin-protein ligase ARI7; TrEMBL-Plants: tr|A0A0L9UNK9|A0A0L9UNK9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0293800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:60054804..60064527) extracted from Lotus japonicus Gifu genome v1.2.
GCATCTTCCAATTGATCTCACTCTAGATCGTGTTGCTTCCTACTTTTTCATCTCCCACCTGCCGCAAAATCCCTCTTCAT CCTCTATATTTTCACTGTGTAGTATATTATTCAATTTATTTATCATTATTATTATTATTATTCTTCCAATTCGCAAGCCT CTCGCTATTTCATACAAAGATCAAACGAAAACCCATAAAGCAATTCACTTTCTTCCTTTCTTCTTGTTCTTCGATTCCTA ATCCCTTTCTCGTTGCCCTAGATTCTCTCTCTCACTCTACCGCTTTTCAATTTTCAACCCCTTTCTATCGATCGCACCTC AATCCTAGGGTTTCCGCCATGGATTCCGAGGATGATATGCACGACGCCAACGATGTCGAGTCCCTCGACGACGATTTCTA CAGTGGCGAAACCGACGATAATGCTCCCATGGATTACTACAGCGACTACGACGACGACGCCGATGATTACTTCGACGACG CCGACGATTCCGACCGGATTCAGTCTCGCCGCCCCGAGGTAGTCGACTCTCTTCGATTCTCATCGCTTTTCTTGTTCAAT TTTGTTTTTGAGCTGTCAATGGTGCCTGTTAATTGGATTCTTGTAATGGAGGCTTTTGTACTGATTTTGAAGCTTTGAGT TCTTGCTTTTTAGCAATATAGGAACTATATTTGAATATTGGTAGGACATAGTATATGCTTAACTGATCCTGATGAAAAGA ATTTTTTTTGGAACTAGTTGATTTATTTATATATAGAGAGGTTGGTTTGATGGGTGGAGATTGTTTGGTAATAGGGTTTT CCATTGGTGTTGTCTGGATATGAATTCTATAGTTTGTATTTAACTACATTATGCACTCTCTGATTGTATATTCCTGTTTG GGTTTCAGCAAAATTTTACTATATTGAGGGAATTGGATATCCGGCAAAGGCAGGAAGATGACATCACGAGAGTAGCGGCA GTTCTTTCGATACCAAGAGTTTCTGCAAGCATCCTGCTTCGTCATTATAATTGGTAAACCGGTTATCCTTCCATCTTGTT TTGATGCTGCCTTGTGTGATATGTGGAAGGGTTTTGGCACTTTGTTGTGAAGTTATGTACTAAAGGAGATATGGGTTTGT GATGCAGGAGTGTTAGTAAAGTGCATGATGCCTGGTTTGCTGATGAACAACAAGTTCGGAAAGCAGTTGGTTTGTTGGAG AAGCCAGTTTTCGAGAATCATAAGGCTAGAGAGGTGAGATATGGTTGTTTGGGTTTTAAACCTGTTCACTAATGTTTCGA CTTTGTCTTTTTTGCTGTGTGGGTTCCATTTACATGTTTTCCCCTCTTGTGGTCAGGTTACATGCGGCATCTGTTTTGAA AACTATCCTCGTGCTAGGATTGAAACTGCTGCTTGTGGTCATCCCTACTGCTTTCAATGCTGGGCTGGTAATACTTGTAC GCTATTATTCTGTTCTGTTGTGGCCAGGAATACACTCTTCACATCATTATGTAATTGTGCATTTTAGACATTCTTACTGG GCACATCCAAATCCAGTTCTCTTATGCATGTTCCAATATTACTTTCTTCAATTTTTTTCATTTTCTGTTAAATCCTGTTT TCTTATCCTTTTTGACATGCTAGGATATATTGGCACTTCAATTAATGATGGTCCGGGATGTTTGATGTTGAGATGTCCTG ATCCCGCTTGTGGTGCTGCCATTGGTCAAGATATGATTAATCTTTTAGCATCTAATGAAGATAAAGAGAAGTATGACCGT TACCTTCTTAGGTCTTACATTGAAGACAATAAGAAGGTACGTTGTAGATATTGAATTTGGACATCGATAATGATAGTAAA CAGATATATACTTTTTGTACTCAATTGCAATCTTGTGGCCACACTTTCTTTTTTTTTTTTGCTAAAATTCATACACCCAT AATTATCTGCATGTTATGTTGAGTGGTACACTGGTTCCACAAATTATCACCTGGATACACATGGGTATGAATTCCCAAAT CTTGTGATGTTACCCTACCTTCTTTAAATCCTTCTTTTGGATGGCTAGAAATGGATTTGCATGTTGACCTCTTTTTTTTC TCAGTTTCTGTCGGTCATCTTATTTCTTGTGTTTCTTTGTTTTATCCAGACCAAGTGGTGTCCTGCTCCAGGTTGTGAAT ATGCAGTTACTTTTGATGCTGGTAATGGAAATTTTGATGTATCTTGCCTTTGTGCATATAGCTTCTGCTGGAATGTAAGT TGCATGTAGATTGTTTCATATTGTTATAGCATTGGGTTTTCCAATACTCTTGTTCCGCTGACTGATCTGGTTTTGGTCTA CAGTGTACTGAAGAGGCTCACCGCCCAGTGGATTGTTGTACTGTGTCAAAATGGATAATGAAAAACAGTGCCGAATCTGA AAACATGAACTGGTACACCATATTATTTTACTTGCCATATTCCGTTGGTGGATATTTTTACTGCTTGTGTGGCCATTAAA TTATTGTACATTTTTTAGTGATCAATGGAAATTATAATATGCATTGCCTAATTTATGTCAAGGTTGATTAGTTTGCTGTT TTTTATGTCAAGTTTTCTGTGGCTATAGCTCTTTCTCTGCCTTCTTTATGTCATAGTTATCGATCGCGGCAAATCGCGGC GCTATCGCGCCGTCGCGTCGCGTCGCGGCCGCTCGCCGCGATTCTGAAGCCATCGCGTCGCGGAACGCCGTCGCGGCTGT CGCGCCGCAAATCGCGGCAAGATCGCGGCCTTATCGCGTGAGATCGCGGCGCCACAAGAAGAAGATAAGGTACAGTTGTG GAAAAACCTAAATTGCCCTTGAAATTTTATAATTAGGTTAAACTTTGAGGGCAATTTTGGGATTTCGCACATAAATAAAT GAAACGCGCGTTTCATCTCTCCCTATTCATCTTCTTCTTCAGCTTCTTCTTCAGCGACAGAACCCATGGCCACTGCGATC TTCTTCAGCCACCTTCCACCTTCGATCAGCACCCATGGCCACCGCCGACCTCCGACAAGCATCGTCCAACTTCCGACGAA CGCTGTGAGGTGACTTTCAGCCAATCTCCGGCGACCACTGCCCTTGGGCCTCTGTTCTGCTCTGTTTTTTTTTTATTTTT CTTTCCTTTCTTTTCCTCTTAATTTTCTATTCTCAATCAATTCATTTTGTTACCAGTTCTCTCGCATGGCATCCTCTTCC TCCTCTCTTCTCTATCATCTCATCTGTTTGTTCTAGATTTTAAGTTATATTTATCATTTTTTTAGTTATTATATGTATAT ACTATTATACTATTAATTATATAAAATTATATATGAAAAATCAAAATAGCGGCCATCCCGCTATGCCTATCCCGCTATCC CACTTTTGGGGTCGGCCGCTATCCGGGATTGACTACTATGCTTTATGTGTGTATTCATATTTAATTATTTACATGTGTTT ACACTAATTTAGTTTTTGATCAATGACGTAGTGTGATCCATATAGTCGACCTCACTTAGTGGGATAAGACTTTTGTTGTT GTAGTTGTTTACAATAATAGGTATACATGCATATATTTTTTGTTTGCTGTATTGAAGGCTGTTGAAATTGGTGATTTTGA GGTGGCCTCCATTTGGACCAGGGGAGGATGTCAATAATTGTGGTCTTTGTTGCATTGGATATTTGACTTTGGTGTGTTAA GAAAGGGTTTTGGAAGCGTCTTAGACATGTTGTGGTAATGAAGGATACTAGTGGCAAACTGAGAAACTAATGCTGAAATT AGTTGATTGCTTTTGAATTTCTTATTTATGACATTTATTCCTTTGTAATGATTATGCATATCCTAACTGGGGAATGTTAA GCAAGTGTATTTCTCCTGCATATTTCTTTTCAAAAACACAAGGATCTAATGTTTAAAATAAGCATTTAACTTTAAGCATT GAAACTTTAATTCAGAATTTTTTCTACACGAATCAGGTTATATGGTGGTTGAATTAGTGCGGATTGCTTACTTCATTTTA AGGAATGAAAACAATGAAGTGCACTAAATAGTGTAGTTTATATTTTGACTTTCTTTACAGTTTTACCTTACCATTCCATG GAATATTAGAGTTCTATCATCTCTAGATCTCCTTCATGCTCATTGATATGCTTCAGTTATTGTAATGCTCTTAAGAGTGA AGGATACTGTCTTGTATTATTGTCCATTATGTACACTGCCACAATGTGTCTTTTTTGGAAACTTAAGACTTGAGACCCTG AGCTAACTGTTAGGTTAATGATTTTCAGGATACTTGCTAACTCAAAGCCATGTCCTAAGTGCAAGAGACCAATTGAAAAA AACCAAGGGTGCATGCATATGACATGCACTCCACCTTGCAAATTTGAATTTTGCTGGTATGCTTTCGAATGATTATTTTG CATTCTTCCTCTTTCCTTCCTTCTCCATTAATATTGTTGCTGAGGGTGGGTATCATGCAATTTGAATAATGCTTTTATAC TTTTGCACCACATGGCTCAGGGCTTACCTTATTATTCATATAGTTTGAGTGTATATTGGTGTTAACTGATTTTGATCGAT TTTGAAATACACAGGCTATGCCTTGGTGCATGGTCAGACCATGGTGAAAGGACAGGTGGTTTCTATGCTTGCAACCGTTA TGAAACTGCTAAACAAGAAGGGGTGGTAAGGGACATAGAAGTACTCTACCTGATTCAGTTTTCGGGCTACAATTAACTTA CTATTCCCCTAGTATATGGTATCTAATTATTAAGTAAATTTTGTTGCGTGTAGTATGATGAAACTGAAAGAAGAAGAGAA ATGGCAAAGAATTCATTGGAGAGGTACACACATTATTATGAGCGGTGGGCCAGCAACCAATCTGTATGCACTTCTTCATT TCTCTTCTGTATCTTATGTCTACATTTATTTACACTACAATTTCCAAAGTCATTTTTTTTTTTAATATTTTGATAAAATC CCTTTAGTGTCAAAGACTATATGATTAATTTTCTTTCTATTGCAGTCAAGGCAAAAGGCTCTTGCAGATCTACACCAGAT GCAAACTATTCATGTAATTTGCTGATACATTTTCATTGTTCATCCATCTTCATTCTTCACCCCCACCCCTAACAGATCAG GAAATATAAATGCTGTCTCAAAATATAGGAAAAAGAACCTTAGAACAATTTTGTTTTGTTATGTAACTAAACTGACTTAG GCAGGGTCTTAAGTCTTACCCCATTCCTTGTTGCAAATTTGATTTTTTTTTCTTCTTTCCTTTAGTTATCCTTTGATTAT TTCACTCACTTGTCTGTTACTTTTGAATTTTGATGCTCTTGAACAAAAAACATAGCCAAATATACCTTCTACTGGACTGC TGTGGAAACTTTTGCTTCTATGTTTTAAGTAGTAGAGCTTAATATGTGATTCTAGGGATGGTAAAGATGTCCACTAATTA TAATTTTTCTTTGGCAGCTTGAGAAACTCAGTGACACCCAGTGCCAGCCTGAGTCACAGCTTAAGTTCATAACTGAGGCC TGGTTACAGGTATATGAATCTGCTTGTATTGTCAAAATTAACTCCTCTCATCTGTCATGTTCTCACTTAATATTTATATG CCCCTTACCTAAATACATATGTGTGGGGTACAAGTGGCATTCCCAAACGGTAACATTTTTCATGTTTCAATTTTTTTATA TTATAACTGAAGTTGATTTTTGAAGATTATTTAAAAATAAAATGAAAATTGTGTTGTGTCCTTCAAGTGTGAAGCCTTAT TTGAGAACTGACCAAGTGTATTAGCTGATAAAATATAATTCTTTTATAGGCAGTGTTAATCGTGTATCGCGGAAAATAGC GAAAAGCCAAAAATCCGCTATTTCAAGTCCTCATAGCAGAAAATAGCGGTGAGCCCTCAGAGCGCTATGCTATAGTGCTA TAGTGCCGCTATAACCGCTATTTGACAACACTGTTTTTAGGAGATATGATGAGAAGTGCTTGACATGATTTGTTCGTAAA CATGTCAAGAACTCTGGTATCTCAATAAGGAGTGCCCTAGAATTTATGAATAATATTTTGATGGGAAACCATTAGGTTCA CATGATATATGTTAGATATATTGCAAATAAGATAGGATATCTTATCTCTATTATTAGATATCACAATTTCATGTATATAG GGAAACTAGGATATTATATCTTTTTTGTGCCTTAATGGTTCCTATTATATATAATGGACTACTCTATGTAATTGGAACAC ACGGATTCACCAAGTTCCTTTCGTCTTTTTCTTGTTATTCAACATGATCGCTCTACCGTCCCCGTTCCTTATTTCATACA TTTAGGTGCAGATTTGAGGTTTTTAGTTTTGGTTTTATTGTTTCTTGGGTTGATCTTTCCTTCTTGACTCCCATGGCTGA CCCGCCTCCTCCCACGGTTGAGAGCTCTATTTTTACCAGCTATGTTACTAGTTACTACCCCCCTTGCCATTGACAAGTTG GATGACACCAACTATGTTTCTTGGGCTTCCAACATTATACTTTGGCTTCGGGGACAAGATTATGAAATCCATCTCACTAC GAAGGCTGATTCGGTGCCTGAGGCTGATTGTCCTTGATGGAAGAAGAATGATGCTCAACTTGGCAGTCTTGTTAATTCCA CCATTACTCCCTCTTTGGAACAGAACTTTCGTTCTCATGACACTTGTGATTCTGTTTGGGCGCAGGCTAAGGTCCTCATT CCCAACGTTTATATGGAGTGTGCCAAAATCTGCTGAATGTCATTACTCCTCATCGTCTTGATGGTTCTCTGGCAGAGTAT TTGGGCTGTGCTCGTGGTCTCCTTCATGATTTTAATGAAGTTTTGCCTTCAGCGGCCACACTTGCCAAGGAGATCGAGCA ACGACAAACCTTCTTCATACTTCTAGCCTTATATGGCCTACCTATGGAGTATTTGTCTGATTGAGATCAGATATTGGGAT CTCCTACAATCCCCACTCTTGAGTGCTACTTGGTCTACTTTGCTGCGTGTTCAACCAAAATCGTCCTCTAAAGGGGGAGT ACTTCCTACTTTGATACTCCCTCCGTCCCCATTTATAAGTCACTCTTACCTAATTCTCTAGGATTAAGAAAAGAAGTTGC TAGCATTAAATTTGTAAATTTTTTTATTGAGTTTCCTAGATTACCCATCAACTTCTCTCTCCAAATTAATTTCTTTTTAA AATTACATTATCTCTTTCATATTAAATATGAGGGTAAGTTTGTAAAAAATTATTAAATGCAGCATTGGTATTATAAAGTG ACTTATATTTTGAGACTAAAAAAACTCTCAAAAAGTGACTTATATATGGGGACGGAGGGAGTAATTATTATCGATGTTCT TGGTTATTTTTTATGAAAAATCGATCTGATTTATTTTCTATCTTCCAGACCTTTTATAATGAAATAAAAAATCAGTTTGG TATTCCAATTAGTACTTTGCAAAGTGACAATGCTGGAGAATATATGTCTACACAATTTCAGACTTTCATGGCTGCTAATG GCATGCTTCACCAAACATCTTGTGTTCACACATCTCAACAAAACGGGGTAGCTGAACGTAAAAATACACACTTGGTTGAA ACCACTAGGGCACTCTTACTTCACAATAATGTTCCTCAGCGTTGTTTGGGGGGGGGGGGGATGTTGTGTTTACTGCTTGT TATCGCATTAATAGGATGCTCTCATCTGTCCTCAACAGCTAGGTCCCCTATGTGAGAATAATAAGAATAAGTCATGACCG TTGGTTTTAATAATGAATGGTCAATATTGAAAGTTATTTAATGGTGTAGTGTGATCATTTAAAAAAGTCATGTCATTTTA AAATAGTCACATGACTTGCTTGAATCATGGTTTGATGACCTTAGTTTTAGTTATTGAATTGTAAAACTTTTATATTGCTT TTGAGGCTTTCAGATGCAATTTCTGCCTGTGACTTTGAGTAATCATTTTTTCGTAACACTGCCCTCAGGACACAGATGAA GTTGCTATTCTTTGAATTATTTTCTGAAGCTAGTCTTATTATGAAATTGTTTGACTTGTAAATTAGATGGCTTCCTGATT TCTGTATCATGTTTGCAGATAGTTGAATGCAGGCGAGTCCTGAAGTGGACATATGCATATGGATACTATTTACTCGAGCA AGAACATGCTAAAAAACAATTCTTTGAATACTTACAAGGTTTTATTTTCAAACTTTAATTTAATTAGAAATGTTTTGCAT TTGTGGTGGTTCTTCTACAAATATTACTCTTTTCTTTCTTCAGGTGAGGCAGAATCTGGTTTAGAGAGACTTCATCAATG TGCTGAAAAGGAACTACAGCTATTCCTTAACGCTGATGGCCCATCTAAAGACTTCAATGACTTCCGCACTAAACTAGCTG GATTGACCAGGTAAATGTTTTTCCTGTTCCGTTTATCATTTGCCTTGCACCATTAATCAACAATCATATTTTGAATTATG TATGGTAAATCAATAATCATGTCTCGAGTTGAAATTTTATCATGAGAAAAATTACATTTTCTATATTACACCTATCTGAA GTCCTTAATAAAACCCATACGCTTGGTTTCAGATTTAATTGTTCTCTTTTCTTTCTAAATGTTCTCCATATCGCGGGTCT CTTAGTTTGGCAACTTGGTTTCAGTATGCTTCTGTTGATTATTATTTTTATACGAATAACATCACTAATTATCTTTTCTA ATCCATTTGTTTTCGCAGTGTGACTAGAAACTACTTTGAGAATTTGGTTAGGGCATTAGAGAATGGTTTAGCTGATGTGG ATAGTAACGGAGCTGCTTCCAGCAAAGCAACGAGCTCAAAAAATGCTGCAGGGAGCAGTAAAGGGAGAGGTGGTAGAGGA AAGGGAACTAACCGATCTAGCATGTCCAACAGAATGACTGATGACAATCATTGGTCTTGCGAAGCTTGTACCTACGCAAA TCTCAAGTCTGCCACCACATGCCAGATGTGCAATCAACCGCGTCGATGAAAAAAAATCCGCTCCTCTATTAGAAACAGTC TTCTGCCCAAGGCGAATACAGCAAAAACTGAATGGAGTTATTAGTCTTTTAGTGATATGCTGGCTCCTTTTTGTTAAGGC TATAGAACTTGAACAGGATGAAGGCGTAAGTCAAGCAAGAAAGGTTATCTTTGCACTTCAATTGAATACATCTGAATTCA ATGTATATAGTGTCTTATCTTTAAATTTATGGATGGGGTTTATGCAACAGGCTTCTGTAACTGAATATTATGGTGGAGAT GAACACAAATGTACTCGTTTGTGTCCTGATTTCTTCTAGTAAAACTGTGTCAGTTGTGTATAAGCATGGGGTTGGTTGCT TTTTTAAGAGTCCGCTAATAATGAATTGTTTGATAGAAATACCATACTGTTACCACAAATTTATTTATATTACCTGTAAA CTTTCTGACTGGATTAATTTATTTAGGTCTTGTTGGATGCGTGCTATTAAACCAATCTCATGAACTATAAAGCCCAAGTT TAAGTTTTGTCTTTTTGAATGCCCTTGAACATGCCTGCTATAAATTCAATTCATTTTATGCGTAATTTGTGGCGATAACC AAGTTTTTAGCTCAATTTGGCATGCTTGTATAGTGAGGCTTTTAACTTTAACTCGTTCAATTATGTAAGTTTACAAATTT TCAGGGTAGTAGCTTGTTCGTTAAATAGTTTGAAATGATGTAGG
CDS sequence (LotjaGi3g1v0293800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATTCCGAGGATGATATGCACGACGCCAACGATGTCGAGTCCCTCGACGACGATTTCTACAGTGGCGAAACCGACGA TAATGCTCCCATGGATTACTACAGCGACTACGACGACGACGCCGATGATTACTTCGACGACGCCGACGATTCCGACCGGA TTCAGTCTCGCCGCCCCGAGCAAAATTTTACTATATTGAGGGAATTGGATATCCGGCAAAGGCAGGAAGATGACATCACG AGAGTAGCGGCAGTTCTTTCGATACCAAGAGTTTCTGCAAGCATCCTGCTTCGTCATTATAATTGGAGTGTTAGTAAAGT GCATGATGCCTGGTTTGCTGATGAACAACAAGTTCGGAAAGCAGTTGGTTTGTTGGAGAAGCCAGTTTTCGAGAATCATA AGGCTAGAGAGGTTACATGCGGCATCTGTTTTGAAAACTATCCTCGTGCTAGGATTGAAACTGCTGCTTGTGGTCATCCC TACTGCTTTCAATGCTGGGCTGGATATATTGGCACTTCAATTAATGATGGTCCGGGATGTTTGATGTTGAGATGTCCTGA TCCCGCTTGTGGTGCTGCCATTGGTCAAGATATGATTAATCTTTTAGCATCTAATGAAGATAAAGAGAAGTATGACCGTT ACCTTCTTAGGTCTTACATTGAAGACAATAAGAAGACCAAGTGGTGTCCTGCTCCAGGTTGTGAATATGCAGTTACTTTT GATGCTGGTAATGGAAATTTTGATGTATCTTGCCTTTGTGCATATAGCTTCTGCTGGAATTGTACTGAAGAGGCTCACCG CCCAGTGGATTGTTGTACTGTGTCAAAATGGATAATGAAAAACAGTGCCGAATCTGAAAACATGAACTGGATACTTGCTA ACTCAAAGCCATGTCCTAAGTGCAAGAGACCAATTGAAAAAAACCAAGGGTGCATGCATATGACATGCACTCCACCTTGC AAATTTGAATTTTGCTGGCTATGCCTTGGTGCATGGTCAGACCATGGTGAAAGGACAGGTGGTTTCTATGCTTGCAACCG TTATGAAACTGCTAAACAAGAAGGGGTGTATGATGAAACTGAAAGAAGAAGAGAAATGGCAAAGAATTCATTGGAGAGGT ACACACATTATTATGAGCGGTGGGCCAGCAACCAATCTTCAAGGCAAAAGGCTCTTGCAGATCTACACCAGATGCAAACT ATTCATCTTGAGAAACTCAGTGACACCCAGTGCCAGCCTGAGTCACAGCTTAAGTTCATAACTGAGGCCTGGTTACAGAT AGTTGAATGCAGGCGAGTCCTGAAGTGGACATATGCATATGGATACTATTTACTCGAGCAAGAACATGCTAAAAAACAAT TCTTTGAATACTTACAAGGTGAGGCAGAATCTGGTTTAGAGAGACTTCATCAATGTGCTGAAAAGGAACTACAGCTATTC CTTAACGCTGATGGCCCATCTAAAGACTTCAATGACTTCCGCACTAAACTAGCTGGATTGACCAGTGTGACTAGAAACTA CTTTGAGAATTTGGTTAGGGCATTAGAGAATGGTTTAGCTGATGTGGATAGTAACGGAGCTGCTTCCAGCAAAGCAACGA GCTCAAAAAATGCTGCAGGGAGCAGTAAAGGGAGAGGTGGTAGAGGAAAGGGAACTAACCGATCTAGCATGTCCAACAGA ATGACTGATGACAATCATTGGTCTTGCGAAGCTTGTACCTACGCAAATCTCAAGTCTGCCACCACATGCCAGATGTGCAA TCAACCGCGTCGATGA
Protein sequence (LotjaGi3g1v0293800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDSEDDMHDANDVESLDDDFYSGETDDNAPMDYYSDYDDDADDYFDDADDSDRIQSRRPEQNFTILRELDIRQRQEDDIT RVAAVLSIPRVSASILLRHYNWSVSKVHDAWFADEQQVRKAVGLLEKPVFENHKAREVTCGICFENYPRARIETAACGHP YCFQCWAGYIGTSINDGPGCLMLRCPDPACGAAIGQDMINLLASNEDKEKYDRYLLRSYIEDNKKTKWCPAPGCEYAVTF DAGNGNFDVSCLCAYSFCWNCTEEAHRPVDCCTVSKWIMKNSAESENMNWILANSKPCPKCKRPIEKNQGCMHMTCTPPC KFEFCWLCLGAWSDHGERTGGFYACNRYETAKQEGVYDETERRREMAKNSLERYTHYYERWASNQSSRQKALADLHQMQT IHLEKLSDTQCQPESQLKFITEAWLQIVECRRVLKWTYAYGYYLLEQEHAKKQFFEYLQGEAESGLERLHQCAEKELQLF LNADGPSKDFNDFRTKLAGLTSVTRNYFENLVRALENGLADVDSNGAASSKATSSKNAAGSSKGRGGRGKGTNRSSMSNR MTDDNHWSCEACTYANLKSATTCQMCNQPRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 49 | 49 | - | – | |
| PANTHER | 1 | 509 | 509 | 1.6E-298 | – | |
| MobiDBLite | 1 | 59 | 59 | - | – | |
| PANTHER | 1 | 509 | 509 | 1.6E-298 | ||
| Gene3D | 134 | 223 | 90 | 3.2E-17 | ||
| ProSiteProfiles | 136 | 349 | 214 | 49.376 | – | |
| SUPERFAMILY | 136 | 221 | 86 | 6.01E-19 | – | |
| CDD | 140 | 190 | 51 | 3.85259E-12 | – | |
| ProSiteProfiles | 140 | 184 | 45 | 9.037 | ||
| Pfam | 209 | 271 | 63 | 5.1E-17 | ||
| SMART | 209 | 271 | 63 | 4.9E-25 | ||
| SUPERFAMILY | 209 | 278 | 70 | 5.65E-12 | – | |
| Gene3D | 267 | 522 | 256 | 3.8E-78 | – | |
| SMART | 284 | 345 | 62 | 0.054 | ||
| Pfam | 287 | 336 | 50 | 1.2E-9 | ||
| SUPERFAMILY | 290 | 338 | 49 | 1.01E-17 | – | |
| MobiDBLite | 524 | 560 | 37 | - | – | |
| MobiDBLite | 524 | 541 | 18 | - | – | |
| Gene3D | 557 | 591 | 35 | 2.5E-5 | – | |
| ProSiteProfiles | 563 | 591 | 29 | 9.032 | ||
| SUPERFAMILY | 563 | 590 | 28 | 2.94E-6 | ||
| SMART | 565 | 589 | 25 | 5.4E-5 | ||
| ProSitePatterns | 567 | 586 | 20 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ubiquitin-protein transferase activity | Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages. | ||
| Biological process | Protein ubiquitination | The process in which one or more ubiquitin groups are added to a protein. |
Expression pattern of LotjaGi3g1v0293800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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