Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0298300 |
| Transcript ID | LotjaGi3g1v0298300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Anaphase-promoting complex subunit 8; TAIR: AT3G48150.1 anaphase-promoting complex subunit 8; Swiss-Prot: sp|Q9STS3|CDC23_ARATH Anaphase-promoting complex subunit 8; TrEMBL-Plants: tr|I1LGI1|I1LGI1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0298300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:62002517..62007942) extracted from Lotus japonicus Gifu genome v1.2.
GCCAACACCAGCGAATGAATTCAAGTAAAGGCGACAAGAAGTAAGAGCAATTTGAAAAACAGAGGTGGCGGTTACTGAAT ACTGAGTGTGAGCAAGCAGCGATGAATTCGAAAGATAGTTGCAGAAGCGAGCTTCGCATTGCCATTCGTCAACTCAGCGA TCGATGCCTCTACTCAGCATCCAAATGGTAACGACCCTCTCCCTCTCCCTCTCAACCACAAACCCTAAACCCCAATGTTC CCTTTCACTCAATCTCTTCATTGCAGGGCAGCGGAGCAGTTAGTGGGCATCGAGCAAGACCCAGCGAAGTTCACTCCTTC AAACACAAGATTCCAGCGCGGAAGCTCCAGCATCCGCCGCAAGTACCGCACCCACGAGGTCACCGCCACGCCGGTTGCCG GAGTTTCGTATGTCGCCACGCCGGTCATGGAGGAGGATGAGGCTGTCGACGGTGATTTTTACCTTCTGGCTAAGTCCTAC TTCGATTGCCGTGAGTACAGAAGAGCTGCTCATGTTCTTCGCGATCAATCCGGACGGAAATCGCTCTTCTTGCGATGTTA CGCTCTTTATCTGGTCAGTTTTGCTCCCTCATTTGGATTTTAATAGATCCTGCTTTTTTCAATTAAATGATATTTTTGTA AGAAAAAAATATTTTATTATGTTAAGGTTGTAATCTGTCAATTTGTGTACGAATTAGTTTATTTATGCTCATACAAATAA TTTTAAATTCTGGTTGCAACTGCGTTGCGGAATTGTGGACAAATGCGGGTTGAAATAGCCGCAATGGCGGGAACTTCAAA ACCCTTTCGCAATTGCGGCTGCGGACCACAAATTATAACCTTACAAATGAATGAGTTGTAGGTTTTCATGTTGATTAGTG GGATTTTATGTGTTGATGTGGTAGTTCTTAAAGGACTTTAATTGTTCATTCAACTGGATGTATCCGTGTGGCCGATGAGT CATTATTGATCTTAAAGGACTTTAATTGTTCGTTCAATTGGGTGTATCCGTGTGGCGATGAGTCATTATTGATGTTAGTG GTTCAGTTAGAGCACTTTAGGGGGGGGGGGGAGGAGAGGAGTATGTGAAGTTAGTGGAAGGGTACGTGTTTTAGTTTAAT TTTTGTTGAGAAATTTATTTCAGTTGGGGGATGTTTGTGTTATCTGCTAAATAAATTGTGATTAATTACACTAATTTTAT TATATTCTCTATCGGGGGATCAACATGTGAGGAATATTTACTCTTGTAATTGAAGCTAAACTAAAGCCCTGCAATTTATT CTTAATAGAGATGATTAGTTTGTTAGGTTTCAGTTTGTTATTTTGTTGTTAGAGGAATTATTCCCTTCTAGTTTTAACCC GCCCAAGAAAAAATCCAACAGTTGATCATCGTTGAGTAACATCGCTTGAGTCACCAGATGTTAGATCTACTCTCTGCCAA ACCCAATGTTAACTAATTTTATCATTGGTAGTGGTAGGAGCATTGGCAGTAAGCAGTGTTAGTTTTAGGTTTGGTGTCGA AGCATTGTCCTAAACTCCATTGTTGTGGGGTGTCCGTGTTTTAGAGCCCATGAAGTGAAGGAAATTAACAGAGCCATATC CTTGGCCTGAGACATGGAGTGAGAGTAATGAGCCAAGGAAATCTTCCAGGGACAGCCGCATAATTTTTTTGCTAATTCTA AATAATTGCAGCTTTGGGAAGATGCAAGTGGAATACCTGGAATGTATTATATCAAAGGAGGGAGTAGCTATGGATGGGAA AAAGGTTGAAGCAATTTTACTTTGGCCAACTCCTAAATCTGTCAAAGCCTTGCATGGGTTCTTACTTCTTAGGCTAGATG GGATAGCGTAGGCGCTTTGCGAAAGATTATGGTAAAATTACATGACCACTGGCAGGGCCAGCCACCTGAGGAGGCTACAT GGGAAGATGTGGGAGACAATTCAGCTGCAGTTTCCAACCTTCAACATTGAGGACACAGTTGATCATTCAAGGGGAGGTAT TGTTTGGGGAGGTAATAATGAAATGGGAAACAAATATGGAGTGTGTTCTAGAAGGAATATAAGAGACTACTAGAAGTTAG GAAGTTATAGGAGGGTGGTTAGGAGAAGTTAGACAGCTATAGGAGGGTTAGGAAAAAGGGTTAATGACGGGAAGGGTAGA CTAGAATGACTTACTTTTGAACCAAGCATAGTTCTTGGACTAGGCTTTGCTCATTGATTTGGAATATTAAAAGAATTCCT TTCTCTAATTTCCTTTCTCAATTTCTTATTCTCTATCGAGATATCAGTGTAACAACCATTTAGCAATAACGTATGTAATA ACTCAACAGTTTTATAGAAGAAGCAAAAATAAAATAAAATAAAAAATGAACTAGAATATAAAAGTATGTTTGCCAGTTAA AACATGAGGAAACTTTTAAACTCTTGCTGTTCGAAGAAACTGTTGGTCATATCATATGTTACCGCGTCGCTTGTTACTTT CTCTTGGGTCCAAACCTAAATAAGAACTAGCATGTAATATTATGCATTGCATGGAAAATTCTAAAAATTCAATTCAAATA AAGATAAGTTTTTTTTTTTACCTTGTTATAAGTGTTATTATCTAATTCTAAATTCAAATCAAGATACGCACCCTTTTTCT CTCTAATCTTATCTCCTATTTGAATAAATTTTTATCTCCTTGAGATAAGACATATTCTTCAAATCTTGAAATTTGAATTA AAAAATAAATCTGATCAACTTTTCTTTAATTTTAAATTTTGATTTTTGTTTAATTGGTTACATGAATTCATGAGAATTGA GAGTGATGGCGTGGCTGGCTGAGAGTTGCGAATGATGTGGACTCCTAACAATTGAGAATAATGGCTCTATCGAGTATCGA GCACTCATATGATGCTGTGCATTTTTCTTATAAATTCATGTAGATTGCCAAGGAGTGATGTTATTTTGGAATTTCAAATT ATGCCTAGAGCTTGTTTTTACGCATTTCGTCTTCTTCCTGCAGGCCGGAGAAAAGCGAAAAGAGGAAGAGATGATAGAAC TTGAGGGACCTTTGGGTAAGGGTGATGTTGTGAATCGTGAATTGGTTCCTTTAGAGAGGGAGCTTTCAGAACTTCGCAAG AATGCTATGATTGATCCTTTTGGTTTGTATGTATATGGTCTTGTGCTGAAACAGAAAGGTAATGAGAATTTGGCACGAAC AGTTCTTGTGGAATCTGTGAATAGCTACCCTTGGAACTGGACTGCCTGGTCTGAGCTGCAATCCTTATGCACTACAATTG ATATCTTGAATAGTCTTAATCTCAATAGTCACTGGATGAAGGATTTTTTCCTTGCTAGTGCTTATCAGGAATTAAGAATG CATAATGAGTGTTTGTCAAAATATGAATATCTACAAGGAACCTTTGGTTACAGTAATTACATACAGGCTCAAGTTGCTAA AGCCCAGTACAGTTTGAGGGAATTTGATCAAGTTGAAGCAATATTTGAAGAACTGCTTAGGACTGATCCTTACAGAGTGG AAGACATGGACATGTACTCCAATGTGCTTTATGCTAAGGAATGCTCTGCCGCTTTGAGTTACCTTGCCCATAGAGTATTC ATGACTGATAAATACAGACCTGAATCTTGTTGTATCATTGGGAATTATTACAGCTTAAAGGGACAACATGAGAAGTCAGT TATCTATTTTAGGAGAGCCCTTAAATTGAACAAAAATTATTTATCTGCTTGGACACTTATGGGTCATGAGTTTGTTGAGA TGAAAAACACTCCTGCTGCTGTAGATGCCTATCGCCGTGCTGTAGATATAGACCCATGTGATTATCGTGCTTGGTATGGA CTAGGACAGGCTTATGAGATGATGGGTATGCCTCTCTATGCGCTTCATTACTTCAAAAAATCTGTTTTCTTGCAGCCAAA GGATTCTCGGTTGTGGATAGCAATGGCTCATTGCTATGAAACTGATCAGCTTCGCATGCTTGACCTGGCAATAAAGTGTT ACAAAAGGGCAGCAGACTGTAATGACAGAGAAGCAATTGCTCTGCACCAGCTTGCAAAGCTGCACGTTGAGCTGGGGCGT CCTGAAGAGGCAGCATTTTACTACCAAAAGGATTTAGAGAGGATGGAATCTGAAGAGAGGGATGGACCTAACATGGTTGA GGCTTTGTCCTATCTTGCAACATTTTGCAAAGCAAAGAAAAGATTTGAAGAAGCAGAGGTTTACTGTACGCGTCTTCTGG ATTACACTGGCCCGGTGAGTCTAAAATATTCAGTTAAGTTTTCAATTTGAAATAATTTTACCTTAACCAGTCAATTAATG ATTTAAATCATTCTTGCAGGAAAGAGAAACAGCAAAAAATTTACTTAGAGGGATGCGATCAACACAATCTAGTTTGCCTC TCATGGATGTTGAGCATTTTCCTCCGAATTCCCTTTGATGAAGCACTGGGGTTGTGTGCTGCGTCATCAATTTCCGTATG AACATCACAATTCATGGTGATAATGAAAATGGTAAGAATTAGACATGCTCAATACTGCAAAGTGCACTAGTGTGTGTTCA TGGTGAACTGAACAAGTGGACAAGCATCATAGCACATTTAAGTTCAAGTGGGGATCTAGTTTCCAAGTACATGAGTCTGA AGTAAGAGCTTTTCTCCCCACTGAAACTTGATTATTGACCGTGAATATCATGAACAGTATAATTTTTTAGATTTATCATA TCAAGCAGGTCACATGTTGCATTATTTTATATAGATTGATGACGAAATGATCTCATTTCTCAGCAACTTGATTAGACAAT GAATCTGTGAATCACTCCCAAGCACAACTACATGCTTTTAACCCAATCTGTACCTAGCGGGGAAGCTTTCAATTAAATTG GAGCAAAACGCATTTATTATAATTTAATTCTCAAGCGCAATTTGGTGCGGGAGGGGTCAATTAACGCCATCTCATGTTGT TATTCTTCTGCTGGTACTGCTCTAAAAAAATATTCTGCTGTGTTTGCAAATTTGGGGTTCTGAATTGGTGGAGGAAAAAC GATTCTTAAAGAGGGTGAAGGAGGGAGGACGCTGTTTGAGAGGTGAAGGCGTGAAACTGTGGAGGAAGGAACAGAGGAGG GAGAATATTGTTCAAGTGTACCTCAAATTACATTGCGGGATGATAATTTTAGTGTACAGCAATTAAAATTGTGGTAACAC ATTATTTTAATAACTTAATGTGGCTCATGTAACTTGTAGGACTATGTTTTATAAAAATATGCTCAATGTAATTGTAGTAA TTAGAGAGATATAGTTAGTTGTAGGTTTAAAATTTCCTCCCCTGTCAATTATTCTCTTCTCCACAAAAAACTGACAAAGG AAGGTAAAAGTGGGAGGAAAATGCATCAGAAATTTTCAACAATTACATAAATGGATTCAAGTAAGT
CDS sequence (LotjaGi3g1v0298300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATTCGAAAGATAGTTGCAGAAGCGAGCTTCGCATTGCCATTCGTCAACTCAGCGATCGATGCCTCTACTCAGCATC CAAATGGGCAGCGGAGCAGTTAGTGGGCATCGAGCAAGACCCAGCGAAGTTCACTCCTTCAAACACAAGATTCCAGCGCG GAAGCTCCAGCATCCGCCGCAAGTACCGCACCCACGAGGTCACCGCCACGCCGGTTGCCGGAGTTTCGTATGTCGCCACG CCGGTCATGGAGGAGGATGAGGCTGTCGACGGTGATTTTTACCTTCTGGCTAAGTCCTACTTCGATTGCCGTGAGTACAG AAGAGCTGCTCATGTTCTTCGCGATCAATCCGGACGGAAATCGCTCTTCTTGCGATGTTACGCTCTTTATCTGGCCGGAG AAAAGCGAAAAGAGGAAGAGATGATAGAACTTGAGGGACCTTTGGGTAAGGGTGATGTTGTGAATCGTGAATTGGTTCCT TTAGAGAGGGAGCTTTCAGAACTTCGCAAGAATGCTATGATTGATCCTTTTGGTTTGTATGTATATGGTCTTGTGCTGAA ACAGAAAGGTAATGAGAATTTGGCACGAACAGTTCTTGTGGAATCTGTGAATAGCTACCCTTGGAACTGGACTGCCTGGT CTGAGCTGCAATCCTTATGCACTACAATTGATATCTTGAATAGTCTTAATCTCAATAGTCACTGGATGAAGGATTTTTTC CTTGCTAGTGCTTATCAGGAATTAAGAATGCATAATGAGTGTTTGTCAAAATATGAATATCTACAAGGAACCTTTGGTTA CAGTAATTACATACAGGCTCAAGTTGCTAAAGCCCAGTACAGTTTGAGGGAATTTGATCAAGTTGAAGCAATATTTGAAG AACTGCTTAGGACTGATCCTTACAGAGTGGAAGACATGGACATGTACTCCAATGTGCTTTATGCTAAGGAATGCTCTGCC GCTTTGAGTTACCTTGCCCATAGAGTATTCATGACTGATAAATACAGACCTGAATCTTGTTGTATCATTGGGAATTATTA CAGCTTAAAGGGACAACATGAGAAGTCAGTTATCTATTTTAGGAGAGCCCTTAAATTGAACAAAAATTATTTATCTGCTT GGACACTTATGGGTCATGAGTTTGTTGAGATGAAAAACACTCCTGCTGCTGTAGATGCCTATCGCCGTGCTGTAGATATA GACCCATGTGATTATCGTGCTTGGTATGGACTAGGACAGGCTTATGAGATGATGGGTATGCCTCTCTATGCGCTTCATTA CTTCAAAAAATCTGTTTTCTTGCAGCCAAAGGATTCTCGGTTGTGGATAGCAATGGCTCATTGCTATGAAACTGATCAGC TTCGCATGCTTGACCTGGCAATAAAGTGTTACAAAAGGGCAGCAGACTGTAATGACAGAGAAGCAATTGCTCTGCACCAG CTTGCAAAGCTGCACGTTGAGCTGGGGCGTCCTGAAGAGGCAGCATTTTACTACCAAAAGGATTTAGAGAGGATGGAATC TGAAGAGAGGGATGGACCTAACATGGTTGAGGCTTTGTCCTATCTTGCAACATTTTGCAAAGCAAAGAAAAGATTTGAAG AAGCAGAGGTTTACTGTACGCGTCTTCTGGATTACACTGGCCCGGAAAGAGAAACAGCAAAAAATTTACTTAGAGGGATG CGATCAACACAATCTAGTTTGCCTCTCATGGATGTTGAGCATTTTCCTCCGAATTCCCTTTGA
Protein sequence (LotjaGi3g1v0298300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNSKDSCRSELRIAIRQLSDRCLYSASKWAAEQLVGIEQDPAKFTPSNTRFQRGSSSIRRKYRTHEVTATPVAGVSYVAT PVMEEDEAVDGDFYLLAKSYFDCREYRRAAHVLRDQSGRKSLFLRCYALYLAGEKRKEEEMIELEGPLGKGDVVNRELVP LERELSELRKNAMIDPFGLYVYGLVLKQKGNENLARTVLVESVNSYPWNWTAWSELQSLCTTIDILNSLNLNSHWMKDFF LASAYQELRMHNECLSKYEYLQGTFGYSNYIQAQVAKAQYSLREFDQVEAIFEELLRTDPYRVEDMDMYSNVLYAKECSA ALSYLAHRVFMTDKYRPESCCIIGNYYSLKGQHEKSVIYFRRALKLNKNYLSAWTLMGHEFVEMKNTPAAVDAYRRAVDI DPCDYRAWYGLGQAYEMMGMPLYALHYFKKSVFLQPKDSRLWIAMAHCYETDQLRMLDLAIKCYKRAADCNDREAIALHQ LAKLHVELGRPEEAAFYYQKDLERMESEERDGPNMVEALSYLATFCKAKKRFEEAEVYCTRLLDYTGPERETAKNLLRGM RSTQSSLPLMDVEHFPPNSL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 564 | 559 | 4.4E-223 | – | |
| PANTHER | 6 | 564 | 559 | 4.4E-223 | – | |
| Pfam | 7 | 157 | 151 | 4.3E-43 | ||
| SUPERFAMILY | 171 | 374 | 204 | 3.96E-5 | ||
| ProSiteProfiles | 269 | 302 | 34 | 6.284 | ||
| SMART | 269 | 302 | 34 | 450.0 | ||
| Gene3D | 334 | 543 | 210 | 9.7E-58 | ||
| ProSiteProfiles | 337 | 370 | 34 | 8.762 | ||
| ProSiteProfiles | 337 | 508 | 172 | 30.179 | ||
| SMART | 337 | 370 | 34 | 1.0E-4 | ||
| SUPERFAMILY | 337 | 503 | 167 | 9.01E-32 | ||
| Pfam | 338 | 369 | 32 | 1.5E-5 | ||
| SMART | 371 | 404 | 34 | 0.68 | ||
| ProSiteProfiles | 371 | 404 | 34 | 10.856 | ||
| Pfam | 378 | 419 | 42 | 2.2E-8 | – | |
| SMART | 405 | 438 | 34 | 0.001 | ||
| ProSiteProfiles | 405 | 438 | 34 | 9.794 | ||
| SMART | 439 | 474 | 36 | 35.0 | ||
| SMART | 475 | 508 | 34 | 1.6 | ||
| ProSiteProfiles | 475 | 508 | 34 | 6.962 | ||
| Pfam | 477 | 509 | 33 | 0.0022 | ||
| SMART | 516 | 549 | 34 | 31.0 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Cellular component | Anaphase-promoting complex | A ubiquitin ligase complex that degrades mitotic cyclins and anaphase inhibitory protein, thereby triggering sister chromatid separation and exit from mitosis. Substrate recognition by APC occurs through degradation signals, the most common of which is termed the Dbox degradation motif, originally discovered in cyclin B. | ||
| Biological process | Regulation of mitotic metaphase/anaphase transition | Any process that modulates the frequency, rate or extent of the cell cycle process in which a cell progresses from metaphase to anaphase during mitosis, triggered by the activation of the anaphase promoting complex by Cdc20/Sleepy homolog which results in the degradation of Securin. |
Expression pattern of LotjaGi3g1v0298300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…